Os03g0780900

From RiceWiki
Revision as of 13:02, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0780900| Description = Protein of unknown function DUF858, methyltransferase-like family protein| Version = NM_001057989.1 GI:115455706 Gene...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0780900

Description

Protein of unknown function DUF858, methyltransferase-like family protein

Version

NM_001057989.1 GI:115455706 GeneID:4334312

Length

3867 bp

Definition

Oryza sativa Japonica Group Os03g0780900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:33230620..33234486

Sequence Coding Region

33231398..33231540,33231629..33231820,33232124..33232235,33232318..33232415,33232519..33232573
,33233127..33233228,33233328..33233447,33233748..33233806,33233928..33234066
,33234187..33234408

Expression

GEO Profiles:Os03g0780900

Genome Context

<gbrowseImage1> name=NC_008396:33230620..33234486 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:33230620..33234486 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggactcccgcggcttcgattccgaaggccgggaattctccagcgccaccgagatgtgggcgcacgaaatcggcgccgcggcggatgccccggtctccgccgcggtagccgaacccgctccggcccccgccgccggaagcaacggggtcgccggcgaggaggaggcaggcggcggcgggaagcgggaggagtggtactccaaggcaatcgcctactggcaaggcgtggaggcgtcgaccgagggtgtccttggagggtacggatgcgtgaacgacgtggacgtcaagggcagcgacgcgttcctccgtcctctcctcgccgagcgattcggcgccgcgaggcgccatctcgtcgccctcgattgtggctcgggcatcgggagggttacaaagaattttcttcttaggcatttcaacgaggttgatcttgttgagccagtgtcccattttctagaagcggcacaggaaaatcttactgaatgtatggaagtaggggaagatacacataaggctgctaatttttattgtgtacctcttcaggatttcactcctgatgaaggaagatatgatgtaatatggatccagtggtgcatagggcaacttcctgatgatgactttatttcattttttaaccgtgcaaagattgggctcaaacccaatggattttttgtactgaaggagaatattgcaagaaacggatttgttttggacaaggaggataacagtatcactagatctgatgcgtacttcaaggagctatttaaaaaatgtggtttatatatccatagcattaaggaccagagcgaccttccaaaggaattatttgctgttaaaatgtatgcattggtgactgaaaagccgaaaattcaaaaaaatgggaagagaaggcgccctaaaaattcaccccccgttgagaaatccgtctccgacaacaattcgttgtcagtccctcgctttgtcccggcggatttcgagacccgcttggagctcatcccctttgtcagaggggtgagtcaacttgtttcgccggctagcgggcctagcccatttaccgagctaaacgagtttgatgagggatgcacagcggttactcgttcgggcacttttagcccactgcaacatggagcagtccgttcgggcccgcctcgacgggtacaaggaccgtctacgtcggctcgagggagaccttggtcgaaaaaaccaggagcgagaggtggtggccgaatccctaaggcaggctaa</cdnaseq>

Protein Sequence

<aaseq>MDSRGFDSEGREFSSATEMWAHEIGAAADAPVSAAVAEPAPAPA AGSNGVAGEEEAGGGGKREEWYSKAIAYWQGVEASTEGVLGGYGCVNDVDVKGSDAFL RPLLAERFGAARRHLVALDCGSGIGRVTKNFLLRHFNEVDLVEPVSHFLEAAQENLTE CMEVGEDTHKAANFYCVPLQDFTPDEGRYDVIWIQWCIGQLPDDDFISFFNRAKIGLK PNGFFVLKENIARNGFVLDKEDNSITRSDAYFKELFKKCGLYIHSIKDQSDLPKELFA VKMYALVTEKPKIQKNGKRRRPKNSPPVEKSVSDNNSLSVPRFVPADFETRLELIPFV RGVSQLVSPASGPSPFTELNEFDEGCTAVTRSGTFSPLQHGAVRSGPPRRVQGPSTSA RGRPWSKKPGARGGGRIPKAG</aaseq>

Gene Sequence

<dnaseqindica>2947..3089#2667..2858#2252..2363#2072..2169#1914..1968#1259..1360#1040..1159#681..739#421..559#79..300#ggcgttctctcttccttccttctcagcttctccaagctcgcgcgcaagcaagccgccgccgccgccgccgccggagagatggactcccgcggcttcgattccgaaggccgggaattctccagcgccaccgagatgtgggcgcacgaaatcggcgccgcggcggatgccccggtctccgccgcggtagccgaacccgctccggcccccgccgccggaagcaacggggtcgccggcgaggaggaggcaggcggcggcgggaagcgggaggagtggtactccaaggcaatcgcctactggcaagtaaagagcgctcactcactccctcctcctcctccctaaaccctaaacccccccaaatccgagcgcattgtctcctcgcggcgaattcggctacaagttttcttgatttgggtgtgctagggcgtggaggcgtcgaccgagggtgtccttggagggtacggatgcgtgaacgacgtggacgtcaagggcagcgacgcgttcctccgtcctctcctcgccgagcgattcggcgccgcgaggcgccatctcgtcgccctcggtgagttcacttctgtggaaggatattctttttggctgttcacggtgctagagctatatacaatcgtcgccgtgctgatatgcagcttgatccacttggttgatgtctgaatttatggcagattgtggctcgggcatcgggagggttacaaagaattttcttcttaggcatttcaacgaggtatgcctctgtatgtttctctcacaatctttgagatgtaactgtaatcatggacgctcacatgcttatcggtatcatgatattgttagaccatatagagttatcttcagtccatgcagctgctgttgtagtacccacatgatgatatattggcaagaatcaatgcattttgttttgccagtcaagcataactctagtaggagtactattttttgttcttttttatctgtaatatttattgttgatgttctttgtctgtatcttccaatggtttgttttaaactggaaatgggtgctcaggttgatcttgttgagccagtgtcccattttctagaagcggcacaggaaaatcttactgaatgtatggaagtaggggaagatacacataaggctgctaatttttattgtgtacctcttcaggttggtttctctacttctttagatcattgttaattgaagtttgatactttgtgctgttttccactccatttcttataatagcattcatttgttgcttaggatttcactcctgatgaaggaagatatgatgtaatatggatccagtggtgcatagggcaacttcctgatgatgactttatttcattttttaaccgtgcaaaggtgctgcatttaattcatatattatgtaaattttactgttacaatgatttgtttctgtttgtattgaagtattcatctgtgcttgacagttagatttaaaatttttgttgtgcgcaaaaagatgttaatatatgctatagcattataccattatttttatagaaggaaactggtcttttttttcccttcgatacagataaacttcttcttgtgcatgaatacaaagttgtttgttactatatactatctgcaaatacctgtccagttgatcaatgatgctaccacttctaccttgataattatgtctgttgcactgctatatttattttgagggagtttactgctagttggatgccgatactttgttctaaatccatgccaagtagtatttctggtcttcgagtctttattttcagcctatttctaattttatcgaatgaaaaatatcaatattcatgtttctgcacttattattagtagtgataaaatccgaattaagatattccatctctacgcattctaattaagtttggattggtaatattgcttccagattgggctcaaacccaatggattttttgtactgaaggagaatattgcaagaaacggtgagtcactgtatcaaatggtttgtctgattactgcgtatactttttgagagatttaacatcgtacttatttgggaattaatatgaggtactgcactttcaggatttgttttggacaaggaggataacagtatcactagatctgatgcgtacttcaaggagctatttaaaaaatgtggtttatatatccatagcattaaggtatgcatgtcataaaattgcaattttcaattacaaacttcatattttccctgtaaatcatctaatcttgcaattataacaggaccagagcgaccttccaaaggaattatttgctgttaaaatgtatgcattggtgactgaaaagccgaaaattcaaaaaaatgggaagagaaggcgccctaaaaattcaccccgtatgatccgctcttaaaatcccccatattagatgggttattacactgtctggcaatgtattgctaaatgtctgtctcgaattttgcacattcatttttgtttggtgtacatttcaatttgaataggcacagttttactgtggctaaattgattttttttcacttgctgctggattattggatgctgttgtaacatactactccctccatttcaaaatgtatgatgttgttgatttttcacatgacgtttgaccattcgtcttattcaaaacaaaaagagtaaaatatcatttcccgtttcagccgttgagaaatccgtctccgacaacaattcgttgtcagtccctcgctttgtcccggcggatttcgagacccgcttggagctcatcccctttgtcagaggggtgagtcaacttgtttcgccggctagcgggcctagcccatttaccgagctaaacgagtttgatgagggatgcacagcggttactcgttcgggtacgttctttgctctaaattgctttggatgcgctcaaaactttaatgtttcttgctaacttttttgctccccctttctcttcgctaggcacttttagcccactgcaacatggagcagtccgttcgggcccgcctcgacgggtacaaggaccgtctacgtcggctcgagggagaccttggtcgaaaaaaccaggagcgagaggtggtggccgaatccctaaggcaggctaaggccgaaaacaaaaaactaaaggaggaactggagaaggcgaagcaccagaacgctaccctcttggactactacaattcgtccgaggggaagatgaacagccttcgccaggagctggactaggcaaaggccgcagccgaaaccacggcgaaagagtctgcccgctccgttgctgagattacagattcggccaagtcggccagctatactctccggcttgcccttcatgagttgggcgcccaggccaaaggcgttccaggcaaaaatgcttccgcgctggacttctcggaatggacacaacaagccggaggtgccgtggctgagaccggcagcaattatggtgattgttgtgctcgggtttcggcggctttcgtgcttggggtgctccaggaaaatgggtgcgaacatgtcgcccaattcccggagttcgtcaagggagattggccggagaagtcgtaccccatctctactactcttcgcgcttggcgaaaagagtactggcagaaggaggggtgaaccatcgctaagggctatctccgcgaccaactggagaagagcgcgaaggctcaacgcgaagcggaagaagccgcggaggagcccaaagctggcgacggtgaagctgacgcagctggcccagatcacccagaggtgtgaggcccttcgccttttagcctccttgtatctagggcagctttcgtagtgtgggcttcgcccttttgcaatgtagccaaatgcgggacacttgtgtttatatattaatgaaaattgggaagtttcgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0780900, RefSeq:Os03g0780900