Os03g0781400

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Revision as of 13:02, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0781400| Description = Ribose 5-phosphate isomerase family protein| Version = NM_001057992.1 GI:115455712 GeneID:4334316| Length = 2320 bp|...")
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Gene Name

Os03g0781400

Description

Ribose 5-phosphate isomerase family protein

Version

NM_001057992.1 GI:115455712 GeneID:4334316

Length

2320 bp

Definition

Oryza sativa Japonica Group Os03g0781400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:33245633..33247952

Sequence Coding Region

33246015..33246084,33246313..33246379,33246458..33246575,33246703..33246759,33246841..33246936
,33247047..33247154,33247242..33247311,33247453..33247580,33247677..33247862

Expression

GEO Profiles:Os03g0781400

Genome Context

<gbrowseImage1> name=NC_008396:33245633..33247952 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:33245633..33247952 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgccgttgccggggcaagcgtgagctcctcttcggcgcggctccgcccgtgcccacgcccccgccgcatcggcaacgtcgcaccggccaccgtgcgccgccgtagccggagacgtgctgtgacctgcgcggccgccgcggacgccgacgtcgtcggcctcttcgacgccgccaagctcacggtggacaggtttgtggagagcggcatggtggtcgggctcggctccggcccggcgtccggcctcgccatccagtacctcggcactcgcctccggcgagggtctctcactggcatccttggaataccctcgtccacgatcagtgcaagtgaggcagtgaaagcagggatacaggtcagcagctacgaggaaggcacccaaattgactttgctttcactgatgctgatataattgaagaggacacaatgaccgctgtcattggccgtcggaaaacggagagcggagagccttctttcatggtggagaagggtattgttaaatcagctgataaacttgccttcatcattggccatgaaaaatatgtgaaaggcatcgaaggttcaattccagtcttggtgaaaagtgcaaattggatcgacactgctgaagagattgatgacttgttcctaggagacgcagaggtatggaggcggccatcgattggaaccgctggtccattaggaggtgacttcccattggttaccaaggagggccatcatgtacttgatgttatcttcacaactcccatcccggatcttggtaaggtagcagaaagcttggagaaaattgccggtgtcgtggaccatgggatagtttccagcattccatcatatgtcgtagttgcattgaacggggaagtgcaggtcttggatgagaagtcatcggtgataccatag</cdnaseq>

Protein Sequence

<aaseq>MDAVAGASVSSSSARLRPCPRPRRIGNVAPATVRRRSRRRAVTC AAAADADVVGLFDAAKLTVDRFVESGMVVGLGSGPASGLAIQYLGTRLRRGSLTGILG IPSSTISASEAVKAGIQVSSYEEGTQIDFAFTDADIIEEDTMTAVIGRRKTESGEPSF MVEKGIVKSADKLAFIIGHEKYVKGIEGSIPVLVKSANWIDTAEEIDDLFLGDAEVWR RPSIGTAGPLGGDFPLVTKEGHHVLDVIFTTPIPDLGKVAESLEKIAGVVDHGIVSSI PSYVVVALNGEVQVLDEKSSVIP</aaseq>

Gene Sequence

<dnaseqindica>1869..1938#1574..1640#1378..1495#1194..1250#1017..1112#799..906#642..711#373..500#91..276#accccttatccgcttcgtcaatgtgccatccatccaatgtatgcaactgtcaagctcgctaggccagcaagctgaggcaccagcccaaccatggacgccgttgccggggcaagcgtgagctcctcttcggcgcggctccgcccgtgcccacgcccccgccgcatcggcaacgtcgcaccggccaccgtgcgccgccgtagccggagacgtgctgtgacctgcgcggccgccgcggacgccgacgtcgtcggcctcttcgacgccgccaagctcacggtgaggggattctccactgttccatcagctcgttgacgcttggatcatgtgtatattattctgacgagctcggtggctggcctggcctggcctcaggtggacaggtttgtggagagcggcatggtggtcgggctcggctccggcccggcgtccggcctcgccatccagtacctcggcactcgcctccggcgagggtctctcactggcatccttggaataccctcgtaagttctggttgctgaagctaacttctttttggatcactcattgtttcaagagtggacgcatgagctcctgacctgaatttccttggatgacatgctttgtcagttgcatctaatccattcttggggttgatcagccaggtccacgatcagtgcaagtgaggcagtgaaagcagggatacaggtcagcagctacgaggaaggcacccaagtatgttgatttctttcaccattgtaaatcttgctgacaatgggagaaagtgggtgaactgctgaaacggtgtttactgacatatagattgactttgctttcactgatgctgatataattgaagaggacacaatgaccgctgtcattggccgtcggaaaacggagagcggagagccttctttcatggtggagaaggtattcaaaaagctcatcagaaatgagattcatttagttgctcatcgagacaaccttggtgtaatctgttctcttcttttccacattgtcatgtgaaaatgcctccatagggtattgttaaatcagctgataaacttgccttcatcattggccatgaaaaatatgtgaaaggcatcgaaggttcaattccagtcttggtgaaaagtgtaagccaccttctggtactggagtgatcagttttctgcaattgcaataatcatcattaatagaagaacgggtcatttcaggcaaattggatcgacactgctgaagagattgatgacttgttcctaggagacgcagaggtgcactcatatatttattatgtaattctaatgtttactctgaagtctgagcaactactggatttgtggtgatgtgaatctgagtactttccatcattggtcatcgttacatgataacctgatgaaggtatggaggcggccatcgattggaaccgctggtccattaggaggtgacttcccattggttaccaaggagggccatcatgtacttgatgttatcttcacaactcccatcccggatcttggtatgctaagttaactcgatgatttagtgaccatttcttcgattgatttttagctggtttgacttgtttcggttacaggtaaggtagcagaaagcttggagaaaattgccggtgtcgtggaccatgggatagtttccagcattccgtaaatttctcaaactaacatgactatatatagtttaatctagtactagaccaaggtgtttcaaagatatagatagttagacctaggagaagcagcctttcctttatgatatttagtaatcattgatgcccaagatttctatcaatgctacacttactacttgagtgcacagtaatgcagctatgcagtgctctacatattctaagacattgcaatccttatctgcagatcatatgtcgtagttgcattgaacggggaagtgcaggtcttggatgagaagtcatcggtgataccatagcaccgaaaatacaaattcaccaagttttacagaagaatctattgcagataggctgaaaaatgccagtgagttaatcgtgtggcagtattttttttcaccatacgacattgttgtcgttcggtttatgacaaccaccacacgaccggagaattttacaacccgagatctacagttactgtgaagaatcgtgtgaatttttctgtttttttttttgtgaatcacgtctatattaagttttcagagaccatggattaaaagtttgagccgagtcataaaagaaagttggccagcgaccatgtaatatgtatgaccaattggcaaaatattcttctcgaagcatctttccaggcttccgctgaaacgcgtacacgttttctcgatc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0781400, RefSeq:Os03g0781400