Os03g0784700

From RiceWiki
Revision as of 13:02, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0784700| Description = Ferredoxin--NADP reductase, root isozyme, chloroplast precursor (EC 1.18.1.2) (FNR)| Version = NM_001058011.1 GI:1154...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0784700

Description

Ferredoxin--NADP reductase, root isozyme, chloroplast precursor (EC 1.18.1.2) (FNR)

Version

NM_001058011.1 GI:115455750 GeneID:4334338

Length

2826 bp

Definition

Oryza sativa Japonica Group Os03g0784700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:33417195..33420020

Sequence Coding Region

33417415..33417673,33417891..33418131,33418515..33418734,33419088..33419423,33419739..33419795
,33419894..33419917

Expression

GEO Profiles:Os03g0784700

Genome Context

<gbrowseImage1> name=NC_008396:33417195..33420020 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:33417195..33420020 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaccgccgttgcgtcccaggttgctgtctctgctccggctggctcggatcgcggcttgaggagttctgggatccagggtagcaacaatattagctttagcaacaaatcatgggttggcaccacattggcgtgggagagcaaggccacgcgaccgaggcatgcgaacaaggtgctctgcatgtcagttcagcaagcgagcgaaagcaaggttgctgtcaagcctcttgatttggagagtgctaacgagccgccgctcaacacatacaaaccaaaggagccttacaccgccacaattgtctcggttgagaggatcgtaggccccaaggctccaggagagacatgccacattgttattgatcatggtggcaatgtgccttactgggaggggcaaagctatggcattattcctccaggggagaacccgaagaagcctggtgcaccacataatgtccgtctttattcaattgcatctacaaggtatggagattcattcgatggaaggaccactagtttatgtgtgcgccgtgccgtttattatgatcctgaaactggcaaggaggacccctcaaaaaatggtgtctgcagtaacttcctatgtaattcaaaaccaggggacaaggttaaagtgacaggtccgtcaggcaaaataatgctcctgcctgaggaagatccaaatgcaactcacatcatgatagctactggcactggtgttgctccattccgtggctacctacgccgtatgttcatggaagatgtcccaaagtacagatttggtggcttggcctggctcttccttggtgtggctaacactgacagccttctctatgatgaagagttcacaagctaccttaagcagtatccagacaatttcaggtatgacaaagcgctaagcagggagcagaaaaacaagaacgctggcaagatgtatgtccaggacaagatcgaggagtacagcgacgagatcttcaagctcttggatggcggcgcgcacatctacttctgtggtttgaaggggatgatgcctgggattcaagacaccctcaagaaagtggcggagcagagaggggagagctgggagcagaagctatcccagctcaagaagaacaagcaatggcacgttgaggtctactag</cdnaseq>

Protein Sequence

<aaseq>MATAVASQVAVSAPAGSDRGLRSSGIQGSNNISFSNKSWVGTTL AWESKATRPRHANKVLCMSVQQASESKVAVKPLDLESANEPPLNTYKPKEPYTATIVS VERIVGPKAPGETCHIVIDHGGNVPYWEGQSYGIIPPGENPKKPGAPHNVRLYSIAST RYGDSFDGRTTSLCVRRAVYYDPETGKEDPSKNGVCSNFLCNSKPGDKVKVTGPSGKI MLLPEEDPNATHIMIATGTGVAPFRGYLRRMFMEDVPKYRFGGLAWLFLGVANTDSLL YDEEFTSYLKQYPDNFRYDKALSREQKNKNAGKMYVQDKIEEYSDEIFKLLDGGAHIY FCGLKGMMPGIQDTLKKVAEQRGESWEQKLSQLKKNKQWHVEVY</aaseq>

Gene Sequence

<dnaseqindica>2348..2606#1890..2130#1287..1506#598..933#226..282#104..127#gattctgtctataaaccccgcctcctcccctcccatctcatctcaactcatctcatctcccttctccagatcaaaagacccttgctttccctcaggatcggccatggcgaccgccgttgcgtcccaggtacgcgccgtcctcgcggttttttggatcccctggttgtcgcgctgcgcgcgatggtgctgagttcatgggggttcttgtggctgtttctgacacaggttgctgtctctgctccggctggctcggatcgcggcttgaggagttctgggatccaggtgcgtggtttggtgcccctgatggtagaacttgcttccttttgggtggaatcctgtgaggattccgcgggcttggattggtcaatgtgtagtaggtggatacaaatctatgggatatatctcagattggttcagtattgagcgctattgagagctaggcaacgccagatattgctgctgcttgttaattcgatgtgcagatcaattatcagggttcagggttttggtttagtaggctgtttatcctgaattcacagcgttcttgaatggtggtgctaaactatgtgctggatttcattctgtgtgattcctcagggtagcaacaatattagctttagcaacaaatcatgggttggcaccacattggcgtgggagagcaaggccacgcgaccgaggcatgcgaacaaggtgctctgcatgtcagttcagcaagcgagcgaaagcaaggttgctgtcaagcctcttgatttggagagtgctaacgagccgccgctcaacacatacaaaccaaaggagccttacaccgccacaattgtctcggttgagaggatcgtaggccccaaggctccaggagagacatgccacattgttattgatcatggtggcaatgtgccttactgggaggggcaaagctatggcattattcctccagtaagtaattcctgctttcaatcattttccttgtttaaaatagaacattatgcttatgctttgtcggtttcgttcatagtctatttatctgattggatattgaacgattgtctcgttgacactattaattaagaacttacaaagatatagtcggtagtatattaggattatttctgtagacactgtttccaatgttctattcaatggcttaaaattgtaaacctaggtgagaaaacctgctcttgataggagacttgagtatgtgcacacactattaatacagttccagtggtatctccatgggcatcaccctcttcactgttctctaaaccctgtgcatttttgcttgttagggggagaacccgaagaagcctggtgcaccacataatgtccgtctttattcaattgcatctacaaggtatggagattcattcgatggaaggaccactagtttatgtgtgcgccgtgccgtttattatgatcctgaaactggcaaggaggacccctcaaaaaatggtgtctgcagtaacttcctatgtaattcaaaaccaggggacaaggttaaagtgacaggttagttgatttctttcagcttcagatgaatgcaaaggctttgtgagtttcctatgaggttgtttaacttctaattccaagcggagcaaaattagttgttttagttgcgtttttcctgaaacccacctttggtagacaacctatttctgagttcatacataccaacaacaaataaacggttctctgcaacaaaggttccaatagcctctcctctaatatgattatgccccttctacaatatgattatcttatcttgctcttttcctttcttactaaagtttgcaatcgcatcttagtttacccttttctttgttagtcatcatgtcctttgtggcacatgatggatgccaagtatctcacagtgatttccttctgaacaccaggtccgtcaggcaaaataatgctcctgcctgaggaagatccaaatgcaactcacatcatgatagctactggcactggtgttgctccattccgtggctacctacgccgtatgttcatggaagatgtcccaaagtacagatttggtggcttggcctggctcttccttggtgtggctaacactgacagccttctctatgatgaagagttcacaagctaccttaagcagtatccagacaatttcaggttgctagacatcatctgtcttgactcttcgtattaattattagtactacatgcatacttggctgaaacagcgccacataatgaacatagatgcctctgtcaactgatgccatcatagaattattgagctttgactttgagagtaccacataaatgagctgtttttgttaagtatattcgtgcatattgctataattgaattgtgttgaatttgtaggtatgacaaagcgctaagcagggagcagaaaaacaagaacgctggcaagatgtatgtccaggacaagatcgaggagtacagcgacgagatcttcaagctcttggatggcggcgcgcacatctacttctgtggtttgaaggggatgatgcctgggattcaagacaccctcaagaaagtggcggagcagagaggggagagctgggagcagaagctatcccagctcaagaagaacaagcaatggcacgttgaggtctactaggatctaagtgtccaaggattatgattgttgcgcagtgaaaaagagaaaacaaaacgcatgatctgatgattcttgtagggtggtgtaaaatcatcattttttttctgaatatgaatcataaaatcacccatgtaattcataagcttctgcatcacatgatgaacgaaaggaagcatgtaacttttgcctgtcactattgcagctggtacctttgctatct</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0784700, RefSeq:Os03g0784700