Os03g0792500

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Revision as of 13:03, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0792500| Description = Similar to Zinc finger POZ domain protein (Fragment)| Version = NM_001058059.1 GI:115455846 GeneID:4334388| Length =...")
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Gene Name

Os03g0792500

Description

Similar to Zinc finger POZ domain protein (Fragment)

Version

NM_001058059.1 GI:115455846 GeneID:4334388

Length

6532 bp

Definition

Oryza sativa Japonica Group Os03g0792500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:33808653..33815184

Sequence Coding Region

33808718..33809178,33812007..33812382,33812476..33812749,33814714..33814898

Expression

GEO Profiles:Os03g0792500

Genome Context

<gbrowseImage1> name=NC_008396:33808653..33815184 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:33808653..33815184 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggatgacgacgcggggggcggaggcggaggcggcgaggcgtccccgccgcacgcgggctccgccgcggcgatggcgggggcggggagggacatcgcggcgtcgccgacgagctcgcggtcggtgacgcagacggtgaacgggtcgcacaggttcgtgatccaggggtactcgctggcgaaggggatgggggtggggaagcacatcgcgagcgagacgttcacggtgggagggtaccagtgggcgatctacttctaccccgacgggaagaaccccgaggacaactccgcctacgtctccgtcttcatcgcgctcgcctccgagggcaccgacgtccgcgccctcttcgagctcaccctcctcgaccagagcggcaaggccaagcacaaggtgcactcccacttcgaccgctccctcgagtccggcccctacaccctcaagtatcgcggctccatgtggggttataaaaggttctttcggcggactgctcttgagacatcggattttcttaaagacgattgcttaaagataaattgtactgtgggtgttgtggtatctactatggattactcaaagccacattcgatacatgttccagaatctgacataggctaccattttgggacactgttggacaatcaggagggtgtggatgttatatgtaatgtggcaggagaaaagtttcatgcccatcagttggtcttggctgcccgatcttcctttttcagatctgaactttttgagcatgaatcagatgaagagaagaatgaagttgatactagcaatgaaatcaaagagattgtcattgatgacatggagccaaaagtgttcaaggctgtgcttcattttatgtacagggacaatcttgttggtgatgatgagttgtctgcatcaagctcggactgctctatctttgatactttagctgggaaattattggctgctgctgacagatatgagttgccaagactacggttattgtgtgaatcttacttgtgcaagcatatttctgtaaactctgtggcaactaccctagcattggctgaccgacatcatgctatggagcttaaatctgtttgcctaaaatttgctgctgaaaatctttcagctgtaatccggaccgacgggtttgattacctcaaagacaactgccccgcgctgcaatcggagatactgaggacggtcgccgggtgtgaggaggaatgcagcagcggagggaagagccagagcgtgtgggggcagctctcggatggcggcgataccagcgggcgcagggtgaggccaagggtctga</cdnaseq>

Protein Sequence

<aaseq>MEDDDAGGGGGGGEASPPHAGSAAAMAGAGRDIAASPTSSRSVT QTVNGSHRFVIQGYSLAKGMGVGKHIASETFTVGGYQWAIYFYPDGKNPEDNSAYVSV FIALASEGTDVRALFELTLLDQSGKAKHKVHSHFDRSLESGPYTLKYRGSMWGYKRFF RRTALETSDFLKDDCLKINCTVGVVVSTMDYSKPHSIHVPESDIGYHFGTLLDNQEGV DVICNVAGEKFHAHQLVLAARSSFFRSELFEHESDEEKNEVDTSNEIKEIVIDDMEPK VFKAVLHFMYRDNLVGDDELSASSSDCSIFDTLAGKLLAAADRYELPRLRLLCESYLC KHISVNSVATTLALADRHHAMELKSVCLKFAAENLSAVIRTDGFDYLKDNCPALQSEI LRTVAGCEEECSSGGKSQSVWGQLSDGGDTSGRRVRPRV</aaseq>

Gene Sequence

<dnaseqindica>66..526#3355..3730#3824..4097#6062..6246#aagcaaaatccccatttccttctcctctccaaaccctagcaaaggctatctctctcttcgccgccatggaggatgacgacgcggggggcggaggcggaggcggcgaggcgtccccgccgcacgcgggctccgccgcggcgatggcgggggcggggagggacatcgcggcgtcgccgacgagctcgcggtcggtgacgcagacggtgaacgggtcgcacaggttcgtgatccaggggtactcgctggcgaaggggatgggggtggggaagcacatcgcgagcgagacgttcacggtgggagggtaccagtgggcgatctacttctaccccgacgggaagaaccccgaggacaactccgcctacgtctccgtcttcatcgcgctcgcctccgagggcaccgacgtccgcgccctcttcgagctcaccctcctcgaccagagcggcaaggccaagcacaaggtgcactcccacttcgaccgctccctcgagtccggcccctacaccctcaagtatcgcggctccatgtggtaatccattcctctccctctccctctccctcctcactctccctgtagtagtgtttcccgccacgtcgccttctgaagcgatcagcgccaggatgtctcctgctcttaattaacgcccgattcgattttgatttgaacggaaatggcggttgtacggtaatcttcagcaattagatcgaaaataccacatgttcgatagttacctgggttgacgttgctcgatttaggtgtgttggtattttccatatggtaaatcagttatcgtgctcctccctgcagtagcttctctcctcatgccttctgaaacaataactcagggtgtctcttattctcaccccttaccggtttggtatcaatttgaatgcagttggtgatgttggcagagttatttttcagtaaatagaccagaactttgctgtgtatggccatttacgtcttacctgatttgacgattttcgatttgggtgtttgtttggttcggcaatgaatttacttgttcctttttggcacaatagtgactgctagttgttgatggcaataaagcatgtacaatttgttgttgctgggtcttgctgccttgtgttttttacacacaaagacgagaacattcttacagggtatttgtttgatttaagcataccaagccaaatcagtatacttcctcctgctctcccagtaaaagaaatacccatccaaaaaatgtagcataactcgtagtacaaatcctaatggcaagtttgattattgagattgattgtgatttggcatagttcacgtgcatttacacgctgcagtttaatttcataaagggaaaggctatggatacaaaattgttcttaccaaacttttacaaacaccaatggggcacgctgtgaataaatttagatttcttatagctgccatctactaattattaaatcaaacggttaagaactttgttggtaagattttcataaaaaaaattaaagcatgtgtagcagtgcttattcctaaatttccaggatttggcttaatttcatctcaaacccaaaacaaaaaggcaaagagcaaatagggcctaacttaaaccggtagagttaaaattagcaactcgacgtaatttggttgggatcaattaatgtggcccgtttcacctcaaatcaggcagcaattccattccacccgctcctcgcttatcccctccccttccttgtgtgttgctataagtcaacttagctctcctcgcctccaagcaaaatccccatttcgcaaagccaccgcgccgcctcctctccgctccaaaccctagatcgcgtctctcttcgtcgccatggaggacgagggcgccgggggcgggggcattggcggcgacgcatccccggtgcacgtgggctccgcgacggaggtgggggtggggcgggacatcgtaccgtcaccgacgagctcacggtcggtgatgcagacggtgaacgggtcgcacatgttcgtgatccagggctactcgttggcgaaggggatggggattgggaagtacatcgcgagcgagacgttcacggtgggagggtgccagtgggcgatctacttctatcctgacgggaagaaccctgaggacaactccgcctacatctccgtcttcattgcgctcatctccgacggcatcgacgtccgcgtcctcttcgagctcaagctcctcgaccagagcggcaaggccaagcacaaggggcactcccagttcgaccgctcccttgagtctagcccctacaccctcaagaatcgcggctccatgtggtaatccaatcttctccctccctctccctcttccttgtagagcaatcagtgccaggatgtttcctgctcttattaacgctcgattggatttttattgaacggaaatggcagttgtacggtgcttttcagcatttagatcgaaaataccacttgttcgacggttgcctggtttgacgttgctcgatttaggtgtgctggtattttccatgtggtaaatcagttgtcgctcctccctgtagcttccctcctcactccttctgaaacagtaactcagggtgtctcgtattctcatcccttaccggtttggttttaatttggatgtagttggcgatgttggcagggttatttgtcagtaaatagaccagaactccgctgtgtatggtcatttacgtgttacctgatttgacgattttcaatttgggtgtttgttttggttcagcaatgaatttggtaatgcaggaatcaatctataaatttgtggtgtattatctatccttggcaaactcattattatgggattctatttgttctgatgttctcaatatgatttttttacgatatcatttaaacggttgctatatttgcatccaatatcctgttcagtttccatatgcatctttgtagaagaacacactaacacattaccttgtgcttccacatttactacaatttccataatagttcaactttagtagtatctctgaactacaccattaataataagctaggctcttcttagaatacgtaagtagtatgggtagatatgacctcaactatccaaaagattgggagaacagtaacatcccttatgaattgattgaagtatgctgattttgttaacaagagctggtcatatgatgggttagatgcatcgatgttaacagtgttgctttttgtcatgtccataaaaaaaattaaattgtatcatcaaatgcattcggctattggccaattttacttcggagtgaagattagcagttagtaatgacaatccttcttctcagatttgagcaaaactgtactcaatttagctttatttttcatcttgatctctatttcaggggttataaaaggttctttcggcggactgctcttgagacatcggattttcttaaagacgattgcttaaagataaattgtactgtgggtgttgtggtatctactatggattactcaaagccacattcgatacatgttccagaatctgacataggctaccattttgggacactgttggacaatcaggagggtgtggatgttatatgtaatgtggcaggagaaaagtttcatgcccatcagttggtcttggctgcccgatcttcctttttcagatctgaactttttgagcatgaatcagatgaagagaagaatgaagttgatactagcaatgaaatcaaagagattgtcattgatgacatggagccaaaagtgttcaaggtgtatttctatttctttactgatcataaccttttttatttcacagttcacaaacttggataatttatcttatgcaaacattctctgttgcaggctgtgcttcattttatgtacagggacaatcttgttggtgatgatgagttgtctgcatcaagctcggactgctctatctttgatactttagctgggaaattattggctgctgctgacagatatgagttgccaagactacggttattgtgtgaatcttacttgtgcaagcatatttctgtaaactctgtggcaactaccctagcattggctgaccgacatcatgctatggagcttaaatctgtttgcctaaaatttgctgctgaaaatctttcaggtaaaaatacttcacatgcaagttagattcatcacatcttatatagaactattaaatttttgcccctttccagctttgccctttctataaagagtaaaatctgaataagtattctacatgacagcaggctagatttgattctatgaataacatgagtatgaggctttgagcatgtttagtccaccagaagttcccctttatgctgaactgtagcactactatgtatatgttcattcctagcagactacggtttgtaaataacatgtcacctgagctatgagtttctgcactatgaactagtataaagtagtctgctcaaaccaatcttcaatcttcatccatttccttcttttatatcgactgatactgcatagaccatcgtaataatcccatcaagagactacttcatcctacaaatttctgtaattccatttttggctttgtactgctactaagaaaatactttgcatacccacaattttgtacacatttgttctaggtggagccccctataacattccagatgcccactaaaagttcccctttatgccaaactggtttgtacatcaaggcaagggttagtaagggtatgtttggttcctcgctgggctaggacatatcccagctagctgagctagcccacatgggcatggctatgtttgctttagctaattgtttagttaatttgctttgactgtctagttagttggattgctgcacaatctttcttttttgaacgcacatgtcctctgtttcactgcacgcggtgatcttgctgtcgaaggcgagtcgatttggctctccttcctgggcaaggactttttggctcaatcaggctagttggccctcaaaaactagtttatgttggtagttccaaacctgtttctgctgaagatccaaacgtaccctaaatgcttgcacatacatttacatgcacctcaactgcaaatacccatggaagaataccatatatgttgcgtttgatttgatgttcttttagcatagtcagtacgaaaaaggtgtatctatatactccctctgtctcaaaatataagcatttttagcatagtgacaagtcaaacattttaaactttgactattaatagcaaaaatataaaaaagatcaatcatgtaaaattgatgttattagatttatcattaaacaaactatctaatatgcaattctttttatttaaaaaatcttctatagatattgttgggtcaaagtagcatctcagagatcgtgtcagagtccaaaaatgtttatattttgggacggagggagtactcatgactagcatagttgtgtttttgtaaatagcatattaactggcctattagttagacgggggaatatccagtgaaaaccatcaaataagtaaaaactcgtgaaaaccatatctaaaagttttgtaaattcatgaaaaaaaatactagagataggtataggcatgaaatacattcataccaaatctcaagtccaaactcgacttcatttgagagaaaaaaaaacactattcacctcaaatttgtcttttttgtttctctcaaatgaagttgagtttggacttgagatttggtatgaatgtatttcatgtctatacctatctctagtaattatttcatgaatttacaaaacttttagatatggttttcacgggttttcaattatttgatggttctcaccggatatgtccctagttagaccactagcatgaacaatgaagtagttggctcaagccaatcttcataattttccgtcttaataatcccatcaagattcaatatattacaccatcctactactttcagtaattccatttttggcttttgcgctactgctaagaaacaaagaaaaaacttacttcgcatgccctccattttttacacgtttgtttcttggtggatctcaattaagtgcgttgaactgttataacattccagatgcccttatgtatctgcagctgtaatccggaccgacgggtttgattacctcaaagacaactgccccgcgctgcaatcggagatactgaggacggtcgccgggtgtgaggaggaatgcagcagcggagggaagagccagagcgtgtgggggcagctctcggatggcggcgataccagcgggcgcagggtgaggccaagggtctgaacacccagccactgctatgccaaaagcggcttgttttaaagtgtaactgtgtaagcgaattgctgctgtacaaatgggacggctaattggtttgtggcgacatttaaaataatagcatcagtctgttatactacccctacattcgttcaaatttcaatagctggtttgggcagtagctccgcagatggaagggattatgtttagtgatctgagacagtgatgtgtagtcagtagtcagctattctagtttcgatttgcaatttataaacttcagtttttagcctgc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0792500, RefSeq:Os03g0792500