Os03g0792800

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Revision as of 13:03, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0792800| Description = Glycoside hydrolase, family 17 protein| Version = NM_001058061.2 GI:297601805 GeneID:4334391| Length = 2285 bp| Def...")
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Gene Name

Os03g0792800

Description

Glycoside hydrolase, family 17 protein

Version

NM_001058061.2 GI:297601805 GeneID:4334391

Length

2285 bp

Definition

Oryza sativa Japonica Group Os03g0792800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:33821607..33823891

Sequence Coding Region

33822562..33823761

Expression

GEO Profiles:Os03g0792800

Genome Context

<gbrowseImage1> name=NC_008396:33821607..33823891 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:33821607..33823891 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gccgctgctctgcttcgccctcgccgccgttcatggcgccgccgcccgtggcgtggtgatgtgacttgtgtgaggttcttgtgcaggtacgtcgccgtcgggaacgagccgttcttggcggcatacaatggcacgttcgacaaggtgacgctgccggcgctgatgaacatccagaacgcgctgaacgacgccggcctcggcgacagcatcaaggccaccgtgccgctcaacgccgacgtatacgactcgccgcaggaccagcaggtgccgtcggcggggcggttccgcgccgacatcgccgacctgatgacgcagatggtgcagttcctggccaacaacagcgcgccgttcaccgtcaacatctaccctttcatcagcctctacctcaacgacgacttccccgtcgacttcgccttcttcgacggcggcgcgacgccggtggtggacaacggcatctcctacaccaacgtgttcgacgccaacttcgacacgctggtggcggcgctcaagggcgtcggccacggcgacatgcccatcgtcgtcggcgaggtcggctggcccaccgacggcgacaagcacgccaccgccacctacgcgcagcgcttctacaacggcctcctcaagcgcctcgccgccaacgccggcacgccggcgcggccggggcagtacatcgaggtctacctcttcggcctcctcgacgaggacgccaagagcgtggcgccgggcgacttcgagcgccattggggcatcctccggttcgacggccagcccaagtaccccgtcgacctcaccgggcagggccagaacaccatgctcgtgccggccaagggcgtgacgtacctgcccaggacgtggtgcgtcatcaacaccaacgccaaggacaccagcaagctcgccgacaacatcaacttcgcctgcaccttcgccgactgcacggcgctcggctacggctcaacctgcgccggcatggacgccaatggcaacgcctcctacgccttcaacgcctacttccaggttcagaaccagaaggacgacgcctgcgacttccaggggctcgccatgcccacgcagaccgacccctccaccccggcctgcaacttcacaatacagatcgccgccacctcggcgggtcaccggcggcgagccggcgccgccgtgctagcgctgctggctttgttccgtttgttcttgctgcattag</cdnaseq>

Protein Sequence

<aaseq>AAALLRPRRRSWRRRPWRGDVTCVRFLCRYVAVGNEPFLAAYNG TFDKVTLPALMNIQNALNDAGLGDSIKATVPLNADVYDSPQDQQVPSAGRFRADIADL MTQMVQFLANNSAPFTVNIYPFISLYLNDDFPVDFAFFDGGATPVVDNGISYTNVFDA NFDTLVAALKGVGHGDMPIVVGEVGWPTDGDKHATATYAQRFYNGLLKRLAANAGTPA RPGQYIEVYLFGLLDEDAKSVAPGDFERHWGILRFDGQPKYPVDLTGQGQNTMLVPAK GVTYLPRTWCVINTNAKDTSKLADNINFACTFADCTALGYGSTCAGMDANGNASYAFN AYFQVQNQKDDACDFQGLAMPTQTDPSTPACNFTIQIAATSAGHRRRAGAAVLALLAL FRLFLLH</aaseq>

Gene Sequence

<dnaseqindica>956..2155#tcccatccatccatcaatccaccgccccgccgcgtcttctcctcgtcggcggcggcggcggaaatctcaacagtttaatgctctcgatcgcgtcggctccccgtgtacccatcaatccgtcaccgtctttttgcttggttcggtcggaaagttacgcggctttcttcttcttcttttcttcttctcccatccgtccctgtccctggggattgatacatttactccgatttggttgctggaattcgcagcgtttacacgtgaattcatccgctttcccgtgctgtttttttcgtaaatgggcggcagttgccagtgagaagtaaccgcgtttccggtgttgtatttcagctctccacctccaggttgtggtcaggcgccattgctatttcttggcttgttcgagctccgcgttttggtttataggatttcagttcattctttcataggccgccattggttggtgttttgatcgagcttgcctctgttcggatcgggagatctttggagcttcttggttgggttccaattcttggattcccaatcatccaggaggccgtataaatcgcctgctgcgattgggaggaacggaatggcggatctcgccgtgctccagtggtggctcggcgcgatggtggcaatggcggcggccgcgtcgtggtccggcggtgtcctgccggcggcggaggcgctggggatgaactggggcacgcaggcgtcgcacccgctgccgcccaagatcgtggcgcagctgctccaggacaatgggatcaagaaggtgaagctgttcgacgccgaccaggacaccctcagcgcgctcgccgggaccggcatcgaggtcatggtcgccatccccaacgtcatgctcgactccatcacggactacgacaccgccaaggagtgggtccgccgcaacgtctcccgctacaacttcgacggcggcgtcaccatcaagtgagccgctgctctgcttcgccctcgccgccgttcatggcgccgccgcccgtggcgtggtgatgtgacttgtgtgaggttcttgtgcaggtacgtcgccgtcgggaacgagccgttcttggcggcatacaatggcacgttcgacaaggtgacgctgccggcgctgatgaacatccagaacgcgctgaacgacgccggcctcggcgacagcatcaaggccaccgtgccgctcaacgccgacgtatacgactcgccgcaggaccagcaggtgccgtcggcggggcggttccgcgccgacatcgccgacctgatgacgcagatggtgcagttcctggccaacaacagcgcgccgttcaccgtcaacatctaccctttcatcagcctctacctcaacgacgacttccccgtcgacttcgccttcttcgacggcggcgcgacgccggtggtggacaacggcatctcctacaccaacgtgttcgacgccaacttcgacacgctggtggcggcgctcaagggcgtcggccacggcgacatgcccatcgtcgtcggcgaggtcggctggcccaccgacggcgacaagcacgccaccgccacctacgcgcagcgcttctacaacggcctcctcaagcgcctcgccgccaacgccggcacgccggcgcggccggggcagtacatcgaggtctacctcttcggcctcctcgacgaggacgccaagagcgtggcgccgggcgacttcgagcgccattggggcatcctccggttcgacggccagcccaagtaccccgtcgacctcaccgggcagggccagaacaccatgctcgtgccggccaagggcgtgacgtacctgcccaggacgtggtgcgtcatcaacaccaacgccaaggacaccagcaagctcgccgacaacatcaacttcgcctgcaccttcgccgactgcacggcgctcggctacggctcaacctgcgccggcatggacgccaatggcaacgcctcctacgccttcaacgcctacttccaggttcagaaccagaaggacgacgcctgcgacttccaggggctcgccatgcccacgcagaccgacccctccaccccggcctgcaacttcacaatacagatcgccgccacctcggcgggtcaccggcggcgagccggcgccgccgtgctagcgctgctggctttgttccgtttgttcttgctgcattagcattgatctactgcagttatattacacaggcttttgattttgttgcagcattcttggtgttgttagtaattagtaaagcctttgtactggagatacgttttcagtatatacatactgagataattttcac</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0792800, RefSeq:Os03g0792800