Os03g0796000

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Revision as of 13:04, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0796000| Description = Similar to Ripening-associated protein (Fragment)| Version = NM_001058088.1 GI:115455904 GeneID:4334419| Length = 75...")
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Gene Name

Os03g0796000

Description

Similar to Ripening-associated protein (Fragment)

Version

NM_001058088.1 GI:115455904 GeneID:4334419

Length

7551 bp

Definition

Oryza sativa Japonica Group Os03g0796000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:33961343..33968893

Sequence Coding Region

33961487..33961506,33966098..33966341,33968101..33968221,33968328..33968515

Expression

GEO Profiles:Os03g0796000

Genome Context

<gbrowseImage1> name=NC_008396:33961343..33968893 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:33961343..33968893 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgatcccgagaagaaggttgttcgcggcgacggacgagatattctgcctgttccaaggcacgatcgagaacatcgcggtgctgaagcagcagtacgggttgcacaacaagggctccaccgagatcaacatcatcatcgaggcttacaggacattgagagacaggggaccttaccctgcggatcaagtcgtcagagacatcaacggcaagttcgcgttcgtgctctacgattgctccaacaactccgtcttcatggccaccgatgctgatggtagcgttccattttattggggagttgatcctgacagccgtcttgtggtttctgatgatgacgaaattgtgaataaggcttgtggaaaatcctctgcaccattccctaaaggtttcttcttcaccacatccggaggactgcagagctacgaacaccctatgaatgaggtgaaaccagtgccgaggctcgacagcaagggggaggtatgcggcacaacgtacacggtcgacgcgaaggcgaagaaggatagcagcattcctagagttggcagcgctgcggattggtcctcgcaatactaa</cdnaseq>

Protein Sequence

<aaseq>MTIPRRRLFAATDEIFCLFQGTIENIAVLKQQYGLHNKGSTEIN IIIEAYRTLRDRGPYPADQVVRDINGKFAFVLYDCSNNSVFMATDADGSVPFYWGVDP DSRLVVSDDDEIVNKACGKSSAPFPKGFFFTTSGGLQSYEHPMNEVKPVPRLDSKGEV CGTTYTVDAKAKKDSSIPRVGSAADWSSQY</aaseq>

Gene Sequence

<dnaseqindica>145..164#4756..4999#6759..6879#6986..7173#gtatagaggatctcaatcccttgctggttgcaatagcacgagaaatatatataaaattaaggcaaaacggtgggagggcggaggtggttgaggtgaagcgaggcctcgccgcatctaccggagcggcgtagccggcgatcggagatgacgatcccgagaagaaggtgagtcggcgatgccccccccccccccccccccccccccccccccccccccccacactagcgaagtagcgctaatttaggattttaggtgatgtccaatcggagaggattttagggtttgtgcgcttgcaacatcgcgtgatgagctcatccgaggatgacttgtacttggcctgtcgagcagcacatcccctccgtgatctgctccaggacgccgcgcctctcctcgtcgctccacgcgtcgtctctcgccgccgcggcctcccaggcgccggggcccttgtgctcgacgtgcccacgcttgtacagcgcgacgcggcgcagcgccgacgtcgacgcctccatggcgaacctcacgagctggacatgccgcctctccgcgctccggaagcccatcaccaccagctccttcaaatggcggtgccgcgaagccgagttcggccatggcccggctgcaccacctcctcttcgctgtgatggtggacatggagggtctccagcaatggcgtcgcctcgacgaggaggcgtggccacgatgcgtcccaggatggaggcacgtcggcgacgaggagccgccgcagcttgggcatcggggcgaaagggctcgtcggcaagaacaagatccacatgtacggcccggtgaagcgcaggacgagatcggtgatgccattggcgttctggaggaactccctgatgctggggatcaagaagcgcagcctcctgcgctctatggccgggaacagctcgtccccttgcagggagccaatggcgtgctcgaggctcacgcgctggaggtacggcgcggcgtcggggtgcgtcagaaacacggcgtctccattgctggcgaggctctccagcatggggagcgacctgatctcgaccgccatgtagccgccgtcgacgacgagctccctgatccgcgacatcggcgcgtccaaggtgagcgggcacccgaatttccgggacctgcaggagctgagatgcagggattgcagctgcgggcacgcggcgaccacgcggtacacggcgggccgcgtcgagcacggcaatccttgcaggacgagagtggcgagcgagccaaacccctgcagcggagggggcaggcagttgcgaagcttgagcctccgcagccgcgacgcgccggggtcgcggctgatgcggcgaagggggaagctgtagaccggcggcgggtgcatgatcggccccgtcggcacggcggacacctcgaggtccgtgacgccccaggaatcgacggcggtgacgaccagctggttgatgcagggggaggcgtcgaagtcgaacacctccagcgacagcctggtcgcacgccggcgagccgccaagagggccctgacggagccggccatggcgcgcatggcgcggcgctcgtaccgcccggtggcggcgtctagcctcgcgcattctcctcgcgcgcggtgaccgacctcctggccttgccgcggatggcaaggcaccggcggtagcgcggcggcagcaggtcggtgactcggaaatcgagggcggggagctcgcgcgggacggccgcccagcgccttgacagcgcggcggtggcgagcgcgtcgcgggtgtcgaggcggcgcaggatgaggtggagcaggtcgtccgggagagcgctgaggcggtcctcgccgcaggctcgccgtcgccgccgatccttgttgctcctagtcctagccatcggagaacaaccccccaagtggagtagtattgctcttgctctgctctaatttctaaaattcagtgatgattcgtggtggggaatttgcgatcgatttatatagatgcgtcgacttgtcgaggggagggatccgattccgatctggggttgtggaccaccaatccgaaccgggcaagggatttggtatttttccccaaactcaagtacaggatttttaaacctaccaagattccaagaagatactagtactatttggaagagttttgtagggttggattcaaagtttcacaattctaataccatgcaccttccatgccggacgttggggttgtatacttttcatgaaatccgatcgaaaaccgacaaatttcgaacaaattttgtagaccaaaacttaattcaaattccctgtttcggtctatcttgtgtcaagtaccgatcgtttttttctgaaatttcgaatgggagcattgaaatttcaaccgacaattgaaagtatacaatagaagtaaacacatcgactagaaatttcaattcgtttataatcttatgttctaaaatagtcctcggtattcagtaccgatagggtttacttggccttcaattgagatctggtgacataccgtcacacagtttataaaacatatattgatcgaattatcatattagattatatatataaactacagctatataaaataaacattttgataaataaaactaacaaatattccttcgatcccacaatataagtatttctaattatgaatatgaaacagttgtctgtttagatttatagctaaaaattgctatttttttgaacggatgtagttatattttaggatagaggtaatagcttacaacaaggatctaagaaatgtatttttttaatgcgggaagaaataatcaggataatagttagatgtagcagataaaaagaacatttcttaagtatattttttaaaatatttaatatatcattataatcgagtagatattttttcgctcaataatctgaatcaaagtaggccaaacttagttattttcgattactttgctagattaattatttgatctacatctctaaacatatgttttctaaaaaaacacttttcactgtatttttagaccacttatttcatgctatatattttgttgagtctgtctaaatttgttaaatttgtcactctattcgagtaaataatccgcaataatagtctgacctacaatttttttcaaacatgatgttaaaccattttcagtttttaatttttgtttttctttgttagttctgcaaacaccttgtgttctcgtgattcagctaaatctcttcctgaagaacggtctgatatatgatgagtcattcttcccaacttataaaggattatcacgagatatctagcattatctaggatgccagattgctactccacgtacgctactcaagtactcatccaacgtattggccatggccaacattaacaacatgcctaaggctaaggttgtcatacagctcagagagacattttactaatgtcaaaatttacaaagttactcccttcgtctcaaaatataacaacttttagctctcaggatttgttccaaaatataacaacttctccatcaacattgttttcccaaccaatcacaatcttgcacaattcacttttctcacctaccttcactactcattcaattataacccctataattcacttctacatactttcttaataactgtgtccaactctaaaacttcttttatattttaagacggatggagttttttttttctctttgatcggaaaaatttacgatggttggaaaacgaaacaagcccatattgctcttgcacaccacggttcggccatttctgaagggcccctcatgcctccccctcttcatcttttccttttcttttttcatttgaggcccacctgttaggaataagaggtttgttctcgtatttattatacttttcagatcgggttgaaaacacatatttttcatcaaattaaaaaactcaaattatttttttaacttttttataaaatttatttgaattacatcaacttttgttgggtaatcaatgaattccacgaaatcctatgatacgctggcgacggattttggtccgcaagggactgtgaagtgtgattgtgtgaaccctggtattcaccgtcagatgcgaatactagaaaaaaaacctaatcccctagtataaaataattataagaggtgaggcttcgaagctagatcatctccaccaccttatagagctagccggatgacacctgcacttttctcaaggtcttcaccgtcagtcagtcacctcgttcctcgtcgtgtgcctatccattttcgcgccctacggctacgagtgcggtggtcgtcacagcccacagccacaggcgctttgtagcgacgtgtggatccgtctcgatccttcgcgtcgccaccgtccttaccgccacacgccttccgtatatagctctcccgcggacgaacacctgtcgtgcactgcgcgcggggggtggcggacgatcggatcgggagaggacgcgacgcgaggcgggctgcgttgtgagggagagaagggatgctggcggtgttcgatcgggcggtggcgccgagccctgaggggctccggcatcccggggcggcgggggacggcgcggcggggctcgccgagaggttccgcgacgcgcgccccggcgccgtcaccgtcgccctcggccccggcggcgccaactccctcgcctactcctcccacggccagagccccctcctccccaggtgacccgctcgctcgatcccccccccccccccacctcgtgcgttctcgtttccaaatccgtggcgcgtttcgtctcctgatttgtggttgattaggttgttcgcggcgacggacgagatattctgcctgttccaaggcacgatcgagaacatcgcggtgctgaagcagcagtacgggttgcacaacaagggctccaccgagatcaacatcatcatcgaggcttacaggacattgagagacaggggaccttaccctgcggatcaagtcgtcagagacatcaacggcaagttcgcgttcgtgctctacgattgctccaacaactccgtcttcatggccaccgtaagtgaatttcagtctcagcgattaattcaatcatgttatatatgtttccatttctctgtttatgggtggacaagctagatttttattgttgcattaccagtatcctaatcgactgttctaatccaatttataggctttattaggcgtttaatagatcttgtgaatctccttttgagatgcatttggattggtattggaattatgcgcagtacatcagcttcctcaaggtggcaatacatataattgcacatttcagataacatttctttggattagatcgtcataaatgttcagataatgccttctttggataaatcacataaatggatgatcattcaacagtttcaacgtactatacctgttggttccatcctaaatctatattcagaacacacacacacacacacacacacataggtaaattaattggttctacatggagtatgggctccaagattcaaattgagtatatacccaatttgaatgagtatgaaatttttttaaatgtttagatatgaacattaacttctttactaacaagttcaaacaagtttgaactgagtttgaacttttttttttgttagattttggttctaggtatataacatccaaacatataattcgttaggtatgtaataatgaattgtgaaataaagttgagtttgagttgttttgctgttaggtatttgtatgaatcgaattcatatacctagatatatactccatggtgcccgggctccaaggtataaaacacacaaattctctcaaatttttaaaaattttcaaattgtgagtatatatctaggtatatgaattcgattcatacaaatacctaacagcaaaacaactcaaactcaactttatttcacaattcattatatgtatacccatatgggactccatggtgcccgggctccaaggtataaaacacacaaattctctcaaatttttaaaaattttcaaattgtgagtatatatctaggtatatgaatttgattcatacaaatacctaacagcaaaacaactcaaactcaactttatttcacaattcattattacatacctaacgaattatatgtttggatgttatatacctagaaccaaaatctaacaaaaaaaaaagttcaaactcagttcaaacttgtttgaacttgttagtaaagaagttaatgttcatatctatctaaacatttaaaaaaagttcatactcattcaaattgggtatatactcaatttgaatcttggagcccatactccatgtagcactagttaatttacccatatatatatacatacatatatatataatttcttgcttgacaaatactagactgccctgttcctggttagctgcagggcagaaccactttataagtgttgagatttcaaatcctgaagattgtcggctgacatctcaacaagatgcaagttgatgcatctttgacaaatactagactgccctgttcctggttagctgcagggcagaaccactttataagtgttgagatttcaaatcctgaagattgtcggctgacatctcaacaagatgcaagttgatgcatcacgaaatcacattccgtctgtttttgctagaaggaattttcgtgatacgcatataacttatcagatgtcactatgtcagcatattgcaccaatgtactatatgttctttcatttgttccggtcgtcgtctgttgtgattcgtagcattgagttgttgacagatgaattgatagctaagtcgatcttcttgcaggatgctgatggtagcgttccattttattggggagttgatcctgacagccgtcttgtggtttctgatgatgacgaaattgtgaataaggcttgtggaaaatcctctgcaccattccctaaaggtaatgaatgataagcttaatcaaccaatcaacaatatcacatcaattctcaaggcctggaactatgcctcttttatcaacacctgacgtgtaatggcttcatcaggtttcttcttcaccacatccggaggactgcagagctacgaacaccctatgaatgaggtgaaaccagtgccgaggctcgacagcaagggggaggtatgcggcacaacgtacacggtcgacgcgaaggcgaagaaggatagcagcattcctagagttggcagcgctgcggattggtcctcgcaatactaaaaccgtataaatcgtcagaagcatatggtatgatgacctagaaacctttgctgcaattacatggagagcactaggcttccgggttgtccacggttacaagtgggcatttgccatctgaaatgttcatctggatggtcagccttgtgctgtgctgctgtctgaaatttctgtcctgtccaccattactgaagaatgagagcgtgtgggtcttgaatttccaataaaacgcaatgccttacagatgtgtaaatagatgtttttgcttactacaatattttctgaacaatcagcatatctataactgtggctagaatgaatcatctctaacgatgtgtgttctgttacttctgtatgtgaagtgatcttcccttctgcttg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0796000, RefSeq:Os03g0796000