Os03g0799200

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Revision as of 13:04, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0799200| Description = Protein of unknown function DUF593 family protein| Version = NM_001058110.1 GI:115455948 GeneID:4334441| Length = 37...")
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Gene Name

Os03g0799200

Description

Protein of unknown function DUF593 family protein

Version

NM_001058110.1 GI:115455948 GeneID:4334441

Length

3776 bp

Definition

Oryza sativa Japonica Group Os03g0799200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:34166526..34170301

Sequence Coding Region

34167375..34168341,34168441..34169657

Expression

GEO Profiles:Os03g0799200

Genome Context

<gbrowseImage1> name=NC_008396:34166526..34170301 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:34166526..34170301 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctccaagaactagtactgttataacctggagatatcagcagctctttgttgtactatcttcagtaatcctggaatgggttttgatgcttcttctgctttttgaggggctactatcctatctcgttacgacattcgcaagcctttgcaagctccaccctccatgcccaatgtgcacaaggctagatcatgtctttggcatggcgcaaccaggcttctaccgtgaccttatgtgcaattctcacaaggcagaagcatcatcatgggcattctgccacattcaccaaaagcttgtagatgtccacagcatgtgtgagtcctgccttctttcatttgccaccaacaagaagtcgaaccttgcgacataccggtccctggcggggaagctcggtgtcggcatcggcaatgaaggtttcaggcctagcttcagtttggacaattcatctgaagcatcagttatcaaggaagatattactaatattttgtgttcatgttgctcaagcccattgaaagtgaaatcatatccttctatggttcttcagaacatagctagtgccattgacactgaggtgaatactagacatgtctcaagagatcagcttattgaggagatcagtcttgtcaggtatagtgagctgaagacttctgactctgaatcagagccctggcaacatggtggtgttgctagcttgctggatgatgcagttgataatttgaaggaagattttactttgagccatccaaaaacaaaatttgcaggtgttattcctacagatgacattgcacaggatcaagtggctaagaactctgacttgatacaactccagaatggtggttctgacagtaagaattctcaagtttcagcagagttgtaccacttcagagctgatggcaatgcagatcttcagtcaactgacttttccagcaaaactgttcagcatcctaccgaagattcagacacaacagataaatctgaagatgatgtttggcacaatgctcttgattccatcagtgaattatcagtgactgataagcctgccgaaaccagtaccgcggagaatgaaccgaaagctgaatttaccgatagaactgcaatgaaggattctttcaaagctcatgaagatctgcagttactgttgtcacaagtttctccaaatgatgccatcaatatccctggtgtacaagagcaagccatactgaacaatatcactagagcactctctcttgacaggaattattcaggtagtatttctgagagcatggccattgatgaagctgaagaacattgtacagttgatcaactgaagaagcaaatcgaattggaccggaagtcgataagtcttctctggaaagagctagaagaagagaggaatgcttcagccattgccacaaaccaaaccatgtccatgatcaccaggctacaagaagagaaagcagcaatgcagatggaaaccttgcagtatcagaggatgatggaagagcaaagccagtacgaccgtgaggatcttcagaagatggctgccatggtgcaagagctcgaagccgagatcgaaggctacaagaccaagctgagagaccaatcgctcgttaacgagatacgcgacgcgatgcgcatttcacgttcagaggaatgtgagactagcatgtcaagaacagctcgatcgctctcattgttcgaagacgagaaggcgtatatatcaaaacacctgaagaaactaagacagaatctccaccaattctcaaacaacggcaagttcatcgacccgaaaaagattgacgacaaagaagacacatttgatgtcacaaacagtgaggatgtataccaagatgctgatgaagattcagaaatgaccaattcagagaattcagagatgaccaatgtgataagaaatggtcgcaacttcaggtacttatctaatggtacagagggattgacaaatggtaaagatgatcctgagggtcagtactatgcaatggtcagtgagaatgacttggttaattttgaagatgagatctctgaactcactgcaaagctgaaggcactggaagaagatcgtagcttcctagagcacagcataaactcgctgagaaatggccaagaaggcaaggagctgatccatggcatcgcttgcagcctcagagagctccggaagatggggatcacttggaaggattgtgattag</cdnaseq>

Protein Sequence

<aaseq>MAPRTSTVITWRYQQLFVVLSSVILEWVLMLLLLFEGLLSYLVT TFASLCKLHPPCPMCTRLDHVFGMAQPGFYRDLMCNSHKAEASSWAFCHIHQKLVDVH SMCESCLLSFATNKKSNLATYRSLAGKLGVGIGNEGFRPSFSLDNSSEASVIKEDITN ILCSCCSSPLKVKSYPSMVLQNIASAIDTEVNTRHVSRDQLIEEISLVRYSELKTSDS ESEPWQHGGVASLLDDAVDNLKEDFTLSHPKTKFAGVIPTDDIAQDQVAKNSDLIQLQ NGGSDSKNSQVSAELYHFRADGNADLQSTDFSSKTVQHPTEDSDTTDKSEDDVWHNAL DSISELSVTDKPAETSTAENEPKAEFTDRTAMKDSFKAHEDLQLLLSQVSPNDAINIP GVQEQAILNNITRALSLDRNYSGSISESMAIDEAEEHCTVDQLKKQIELDRKSISLLW KELEEERNASAIATNQTMSMITRLQEEKAAMQMETLQYQRMMEEQSQYDREDLQKMAA MVQELEAEIEGYKTKLRDQSLVNEIRDAMRISRSEECETSMSRTARSLSLFEDEKAYI SKHLKKLRQNLHQFSNNGKFIDPKKIDDKEDTFDVTNSEDVYQDADEDSEMTNSENSE MTNVIRNGRNFRYLSNGTEGLTNGKDDPEGQYYAMVSENDLVNFEDEISELTAKLKAL EEDRSFLEHSINSLRNGQEGKELIHGIACSLRELRKMGITWKDCD</aaseq>

Gene Sequence

<dnaseqindica>850..1816#1916..3132#atcttctgttctcttccagcctgtaatgacgagttctgagaggctccccatctcgaattcatgctccatttgacaactctttctatgccctttttattttttttttgataaagaatgtagttattgatgcaaagtaaatttcttattttatgatttgtctattggtacctttggtagttgacgagtagtgctgcaaggacaaggaaaaggggagatctgaggagcagtttcttctttcctcattcctctctcctaccctagaacaagaaatgatccttgatcccttctaaaattcagacgcaggtatgctagatgagtcattttatttctcttcctttagtcaccgaggcaattggagaattcttgtttagtttgatttgctttacatttccgactagattttgttctgtgaacatgggaggcttgggctatgcaatgggttcctcatgtgggttttttgtgctaatttttgtagatgattttgaaagttaaaattgtccgcattcttgctatcttgcctgcttactggaagttggtcataattcgtccgtaattttggaccgttcagagttgtaagttgtggaaatagtacaagataatttactgaaattttactttgggaaatttgatattgaggaaattctcttgttctgctgcacagctgcaaccctaattcttgctaaaacccttgaccctgattctctctacaaaatggtagtttactgggatatatcaatctttagccgaactttttagtgatataacctcatactttgctgctctcatgcaaaatattatctttcaggaaatataaattcagtgacaaattttcatccaaaattgacattaatggctccaagaactagtactgttataacctggagatatcagcagctctttgttgtactatcttcagtaatcctggaatgggttttgatgcttcttctgctttttgaggggctactatcctatctcgttacgacattcgcaagcctttgcaagctccaccctccatgcccaatgtgcacaaggctagatcatgtctttggcatggcgcaaccaggcttctaccgtgaccttatgtgcaattctcacaaggcagaagcatcatcatgggcattctgccacattcaccaaaagcttgtagatgtccacagcatgtgtgagtcctgccttctttcatttgccaccaacaagaagtcgaaccttgcgacataccggtccctggcggggaagctcggtgtcggcatcggcaatgaaggtttcaggcctagcttcagtttggacaattcatctgaagcatcagttatcaaggaagatattactaatattttgtgttcatgttgctcaagcccattgaaagtgaaatcatatccttctatggttcttcagaacatagctagtgccattgacactgaggtgaatactagacatgtctcaagagatcagcttattgaggagatcagtcttgtcaggtatagtgagctgaagacttctgactctgaatcagagccctggcaacatggtggtgttgctagcttgctggatgatgcagttgataatttgaaggaagattttactttgagccatccaaaaacaaaatttgcaggtgttattcctacagatgacattgcacaggatcaagtggctaagaactctgacttgatacaactccagaatggtggttctgacagtaagaattctcaagtttcagcagagttgtaccacttcagagctgatggcaatgcagatcttcagtcaactgacttttccagcaaaactgttcagcatcctaccgaagattcagacacaacaggtttgcactatcctctccaaatgttaaaaaaaaaaacattgttggattaactattcacttgcttagagtattgacactggtttttcttttcttaagtagataaatctgaagatgatgtttggcacaatgctcttgattccatcagtgaattatcagtgactgataagcctgccgaaaccagtaccgcggagaatgaaccgaaagctgaatttaccgatagaactgcaatgaaggattctttcaaagctcatgaagatctgcagttactgttgtcacaagtttctccaaatgatgccatcaatatccctggtgtacaagagcaagccatactgaacaatatcactagagcactctctcttgacaggaattattcaggtagtatttctgagagcatggccattgatgaagctgaagaacattgtacagttgatcaactgaagaagcaaatcgaattggaccggaagtcgataagtcttctctggaaagagctagaagaagagaggaatgcttcagccattgccacaaaccaaaccatgtccatgatcaccaggctacaagaagagaaagcagcaatgcagatggaaaccttgcagtatcagaggatgatggaagagcaaagccagtacgaccgtgaggatcttcagaagatggctgccatggtgcaagagctcgaagccgagatcgaaggctacaagaccaagctgagagaccaatcgctcgttaacgagatacgcgacgcgatgcgcatttcacgttcagaggaatgtgagactagcatgtcaagaacagctcgatcgctctcattgttcgaagacgagaaggcgtatatatcaaaacacctgaagaaactaagacagaatctccaccaattctcaaacaacggcaagttcatcgacccgaaaaagattgacgacaaagaagacacatttgatgtcacaaacagtgaggatgtataccaagatgctgatgaagattcagaaatgaccaattcagagaattcagagatgaccaatgtgataagaaatggtcgcaacttcaggtacttatctaatggtacagagggattgacaaatggtaaagatgatcctgagggtcagtactatgcaatggtcagtgagaatgacttggttaattttgaagatgagatctctgaactcactgcaaagctgaaggcactggaagaagatcgtagcttcctagagcacagcataaactcgctgagaaatggccaagaaggcaaggagctgatccatggcatcgcttgcagcctcagagagctccggaagatggggatcacttggaaggattgtgattagctgaagcttcatcagaggatacacgtttgacagaggtaatgcagattcagttaggtagaagttcacaagtactgatctatataaattcatggcacattatacaatgattgttccttaattgatttctttatctctctcatgattgacatggatcacttatcatctcaatggcctcttattatttatctgttagcttatcagtcgcacagacaaaatttaaaatttcaaacttaatttatttacagttgattttcgagtctttcgtcgtagtctatttttcacctctgacttttaaacaactaacatcatgaatatagaagttttacacataaattatttttagttgattcttcttttttttacaatttatcagctgtagcttgaccgatcacttatcatctctaattgacagttgaccacgtggctgcaggatgtaaactgtaaagagtgatggattaagctgctgactgtatatgtgctaatgtgcatgtgcacacggcggttgctgtcatgtcatgcggtggtggtaggttttgggccgttgcaagtgcgccgtgctcttcgcgtggagtgttccttgtacaaatgcagtgtggattttttgagtgctcagaattgaccaatatgcatacacaccttttctc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0799200, RefSeq:Os03g0799200