Os03g0805300

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Revision as of 13:05, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0805300| Description = Similar to Phosphoprotein phosphatase 2A isoform 4| Version = NM_001058162.1 GI:115456052 GeneID:4334494| Length = 4...")
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Gene Name

Os03g0805300

Description

Similar to Phosphoprotein phosphatase 2A isoform 4

Version

NM_001058162.1 GI:115456052 GeneID:4334494

Length

4534 bp

Definition

Oryza sativa Japonica Group Os03g0805300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:34472665..34477198

Sequence Coding Region

34472780..34472854,34473451..34473507,34474507..34474590,34474684..34474755,34474877..34474948
,34475120..34475160,34475626..34475692,34475782..34475973,34476056..34476145
,34476220..34476327,34476622..34476687

Expression

GEO Profiles:Os03g0805300

Genome Context

<gbrowseImage1> name=NC_008396:34472665..34477198 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:34472665..34477198 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagcagcccccatggcggcctcgacgaccagatcgagcgcctcatgcagtgcaagcccctccccgagcccgaggtcagagcactttgcgagaaggcaaaagagatattgatggaggagagcaacgttcaacctgtaaagagtcctgttacaatatgtggtgatattcatgggcagtttcatgaccttgcagaactgttccgaatcggtggaaagtgcccagatacaaactacttgtttatgggagattacgtggatcgtggttattattctgttgaaactgtcacgcttttggtggctttaaaggttcgttatcctcagcgaattactattctcagaggaaaccacgaaagtcgacagatcactcaagtttatggattctatgacgagtgcttaaggaagtacgggaatgcaaatgtgtggaaaacttttacagatctcttcgattacttccccttgacagcattggttgagtcagaaatattttgcctgcatggtggattatcgccatccattgagacacttgataacatacgtaacttcgatcgtgtccaagaagttccccatgaagggcccatgtgtgatcttctgtggtctgatccagacgatcgatgtggttggggtatttctcctcgaggtgctggatacaccttcgggcaggatatatcagagcagttcaaccataccaataatttaagacttattgctagagctcaccagttggtcatggagggattcaattgggctcatgagcaaaaagttgttaccatatttagtgcacctaattattgctatcgctgtgggaacatggcatcaatcttggaagttgatgattgcagggagcatacattcatccagtttgagccagccccaagaaggggagagccagatgtaactcgtagaacacctgactatttcctgtga</cdnaseq>

Protein Sequence

<aaseq>MSSPHGGLDDQIERLMQCKPLPEPEVRALCEKAKEILMEESNVQ PVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALK VRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKTFTDLFDYFPLTALVESE IFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTF GQDISEQFNHTNNLRLIARAHQLVMEGFNWAHEQKVVTIFSAPNYCYRCGNMASILEV DDCREHTFIQFEPAPRRGEPDVTRRTPDYFL</aaseq>

Gene Sequence

<dnaseqindica>116..190#787..843#1843..1926#2020..2091#2213..2284#2456..2496#2962..3028#3118..3309#3392..3481#3556..3663#3958..4023#agaccttttgcccccctcctctcctccgcctcctccacacacgagcgcgtcccccgacgccgcgccgagatctagggttgggcgcgcgcgacgccccccccccgcggcgaggaggatgagcagcccccatggcggcctcgacgaccagatcgagcgcctcatgcagtgcaagcccctccccgagcccgaggtacccaccacccacacggcctgctctccctctgctggctgttcgttcttcctcctcctccgccgccgctcgacctcgcgctgttgctgtctgttctttcggttcgggcgtggcgggtgtggccagatctggcggatttgcgggcctttcgggggagatcgggcctcgggttgcgctcggctccatttcgttttttttttgttgaagaaaaaaagtttgctcggattttcggttgttgtgatttggtggagcgaacgctgtgtgtttactctccgggttgcaaagcgacgaggtttgcatctcacaggattagatgcggtgagatgacgaaattattttctgtctgaggcccctggcttttgcatgaagtgccaatgttctctggatgctcgtcgtcaatggcagaattttggcagctggttgaattgtgaaagaaaaaatgagtcttggcaggaaaatgtttagggtgttattggtcttccaaaccgatagatttatgccttttgccaaattcacacctctctcgattaaattctttctggttaattagtgagccaccatagatttgctctcattcttgagtatttttcgtacaggtcagagcactttgcgagaaggcaaaagagatattgatggaggagagcaacgttcaagtatgatattttacagctctatgatgtctttcttgattcgctaggattagccaggatctcatttttgggcctgcttttgttcatcgcagtataatttaggtggtaatagttaagggaaaacatcagatctatttctcatgaaaactcaatgaaaaagccaacaatatcttatattcttatggcttttgagactaaggtcatctctaccagactagtcttctatgctgtgatggtgtcatctgttacaataccttgcatggaaaacttccaaaatttagtttgtctaaatgtgcaatactccagcttgttttcttggatcacttgcatgaaatgatggtactatttgactgacgaattagcttctatagtctttgaagtaatgggaacctatgagcatggtttgtctttgacaaggatgaatatttcatgttggcagtgcaacaatcacacttcattaatctcttaaatttgtcatggatctttgctcagatcactagaaatattcatctaggatcaaattcttttgtaagtcaaccagaaacgaaaaaaaaattaaattgtacatcaaacttggttacaaaatataataattaaagaatagaacaacaatagcaaaataagttgcgggtaatctagaggaagttggggtagtcttgagacgaaacccaggttgaaccacacaaggatttagtcttcagatcatgtatatgcatgtctcctcggaaaattttattctagtttcttgttctgaatttatgtaaatccataatattgacagaagtacttatatttggttttgttctgtattatgtgttgcatggtatagccttacaggttttgttttgttttgaaactgccgtgcaaacgaaagttaaagcagctttattttgtatacttttaacttacagtgattccttgagatggttatgtgcctcccatataataaattatgaattcttttgttgataatttaacattttctttgccatgcttctgcagcctgtaaagagtcctgttacaatatgtggtgatattcatgggcagtttcatgaccttgcagaactgttccgaatcggtggaaaggtatcagttgtattttcctgttcgttgtcccctttgcatatcttgagtccatcaaacttcaaatatatttatgctttctcttcactttaccagtgcccagatacaaactacttgtttatgggagattacgtggatcgtggttattattctgttgaaactgtcacggtaagagtagtttaagcatcaacatggctgattatcattttgttttggtgggcacatttaacttacaaatacttctaaaattaatagttcttgattttaatgtattcctttacaaaaacagcttttggtggctttaaaggttcgttatcctcagcgaattactattctcagaggaaaccacgaaagtcgacaggtatgtactttttttaaaatgcagattcttgatgtttgcttactgtcattatatgaaagttaaagcttttgttgcatctcttcattctttgttatcctttctgtgtacaactgtacatgctcacaagtcacaactgatgaactgaatgatgctttttgaatcattttgcagatcactcaagtttatggattctatgacgagtgcttaaggaagtaagtgccttttgttatgtgttgtaactaaagtaaatttgttctaggcaagcttttatctagtcttgttctgataaatgacagcggtggtaaaataatatgatccattagtaactaatttacttctatataattttatgatgggtcagcttggtccattgaccattaaggatatttgtatcattcatgtgtatagttgtttgcaacttgcaactattgttactaagacataagatgaacctactgcaatgttctaaaaggccattttgtgctgataaaaatatagtgatgaatcatgtgtaaaaaggtatttaggctatttttcaacaatttgtttcatacaataaacttcactgctgcttgtattatatcaattacctttttaatttgagactgaaatttattctcccttttcttggtgaattaagcttacaagaaccgtttttttttctgtatttcttgcaggtacgggaatgcaaatgtgtggaaaacttttacagatctcttcgattacttccccttgacagcattggtgtgtattcagcattttcatatgtatatgccaacatccttcccacattatctagtgaatctgacagaagctgttcatttgttctgtaggttgagtcagaaatattttgcctgcatggtggattatcgccatccattgagacacttgataacatacgtaacttcgatcgtgtccaagaagttccccatgaagggcccatgtgtgatcttctgtggtctgatccagacgatcgatgtggttggggtatttctcctcgaggtgctggatacaccttcgggcaggtaacattttatataagaaaaagaatctctatatttagctgtgcacctcatgttcatcgacttatcaattctatcatttcaggatatatcagagcagttcaaccataccaataatttaagacttattgctagagctcaccagttggtcatggagggattcaattgggctcatgtaattatctctacttgaactcagtatttttggtttccataccggttcactaacattttgcaaacactgaacaggagcaaaaagttgttaccatatttagtgcacctaattattgctatcgctgtgggaacatggcatcaatcttggaagttgatgattgcagggagcatacattcatccaggtaatggttgaacattcattgacttttagtttatagaaacaaactaagactattaagaaacatgccccttcatggtttatagaaacaaactaagactattaagaaacatgccccttcatggtccccagtgacaggtatttgactaatgaaacatgaatgcatgattggtacatgttctgcttttgcaactctcattctatgtgttgggttcccattttgcttatgcctttgtgatctggctccacggttattttctgttgcaccttatgagctatatgttgtttcattctgcagtttgagccagccccaagaaggggagagccagatgtaactcgtagaacacctgactatttcctgtgatgtaaaagtggtggactgtctctgcagcaaatgtttgatagctaggtgaagttccctggttgcagatatttttttcccctcgaatctcctgtgtgttattcttactacctttgcccgtggcgcttggctatcgcgagctgctttgctgcatcatgattcaagtgtatacctacagctgggaggattcatcgtgttctcacttatctctaattggctgatgcttggcttgggggctgcagtggtgactcgaagcatcaagtagcaaatttgtattatgaaaggaaaactattctctttgtattcattttgttcgcctttcttccccacaaatttcacctaattttcttttttcttttttcatgatccttgtagagatgaacaatgtagttgtatggctccctgttgagccggtaggtctttctgagtacatcttgatttgccgtacataattgcttgaaaaacaagtattagaattctttgtgaccaacacttgagctccgatttttctttc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0805300, RefSeq:Os03g0805300