Os03g0806500

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Revision as of 13:05, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0806500| Description = Thioredoxin domain 2 containing protein| Version = NM_001058170.1 GI:115456068 GeneID:4334502| Length = 3054 bp| De...")
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Gene Name

Os03g0806500

Description

Thioredoxin domain 2 containing protein

Version

NM_001058170.1 GI:115456068 GeneID:4334502

Length

3054 bp

Definition

Oryza sativa Japonica Group Os03g0806500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:34543872..34546925

Sequence Coding Region

34543885..34544067,34545164..34545345,34545454..34545578,34545967..34546382

Expression

GEO Profiles:Os03g0806500

Genome Context

<gbrowseImage1> name=NC_008396:34543872..34546925 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:34543872..34546925 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgcgctgcgccgtcgtcgccgccgtcgcggccgtgctcctcgtcgccggcgcggcggcggcggggggtggggaggaggaggaggccccgtcgacctgcgcgcggaggggcccgggtttcgtcgacgcgctcgcgtcgcgctgcccctgcatccggatcgagccatccccgcctgtagaggtgagaggagaggctattgctaaagagttgaaccttcgccacagaggtgttacgtactccgttctcttctatgctgcttggtgtccattttcaagcaagttccggccaatatttgaagctctcagcactatgttccctcagatatatcactttactgttgaagaatcatctgcaatgcctagtttgttttcaagatatggtgtccgtggattcccggccattcttcttgtaaatgagactacaatggtacgatactggggcccaaaagatctcagctctctggtggacttctataaagaaactacaggcttcgatccaattgcatattttgatgtcgatcatcaagacagtactggagatttcagaccagtcacaccaggggaccgatctctgcgtaaaattgcaaaagatgagccatttgtgttgcttgcggtgctttttatcatcctgaaggttgcagcgcatttcgtccccatcgtcgtctcccatctgaaaacgttcttggtcgtgcgtgttcagaacttgaacttagggatccgtaggggatcaagccaactgttggaacgagcgctgaatgtacttgatgtgaagaggctttgtagcaagcttagactgagcaataagacaagggaccttaggaaaggcgcaagcaatgctcgagcttgggcttcctcgtttacttctgtttcactgggtgaatcatcatcctcacggcaagcttaa</cdnaseq>

Protein Sequence

<aaseq>MTRCAVVAAVAAVLLVAGAAAAGGGEEEEAPSTCARRGPGFVDA LASRCPCIRIEPSPPVEVRGEAIAKELNLRHRGVTYSVLFYAAWCPFSSKFRPIFEAL STMFPQIYHFTVEESSAMPSLFSRYGVRGFPAILLVNETTMVRYWGPKDLSSLVDFYK ETTGFDPIAYFDVDHQDSTGDFRPVTPGDRSLRKIAKDEPFVLLAVLFIILKVAAHFV PIVVSHLKTFLVVRVQNLNLGIRRGSSQLLERALNVLDVKRLCSKLRLSNKTRDLRKG ASNARAWASSFTSVSLGESSSSRQA</aaseq>

Gene Sequence

<dnaseqindica>14..196#1293..1474#1583..1707#2096..2511#agagagagaggctatgacgcgctgcgccgtcgtcgccgccgtcgcggccgtgctcctcgtcgccggcgcggcggcggcggggggtggggaggaggaggaggccccgtcgacctgcgcgcggaggggcccgggtttcgtcgacgcgctcgcgtcgcgctgcccctgcatccggatcgagccatccccgcctgtagaggtaggtgttccccaatccccacctcctctccggcagatagcttgtcaattcaattatcccatgttgttctagaagcagcgagtatctgcgcgtgttcctcttcgtgtggaatatctacttgtcaaaatgcgggcaaacgacagtggcgtattgtgtgtatccgttatcaaaccaccggatagatgtgcgatttgtggttagaaatatattgcaccattaatttgtgcatatgtgcgtttgtttgttgccaacaattagctgattaacgggggaattgattgagggaaggtaacaaaacaatgattggcagcgcaaacgacattcaaggcgcccaggtgctagcggtagggagggactacatcataggtgaaacgggcgggcaggactcaggagggattttcagtgtcttatgtaagattggaaaggcagacataggaggaagtagctattgagatgatgatgttaacatagttacgaaatataaattcactaaagttcccagatcgatgggttgaggaatgagatcaaggaatattgtatgctactttgaaaggttttaacaattgttcctgggacggagacgacgatcccgggccaagttatgtggtgtcatttcatgttccgggtgaataacattaggctgactggatgccccaaagcttagaaaatgttaaatatcttgttggagtgttgctatgtgctgtatttcttgtgaaggcgcttcctcaacgtgtttgaaggatatcttgtagatttgttgcttttcaatatgcagtctagggcaaatttggcattatcctgcatttccaaatttcttatgggtagtctttaaaattgatgaattgtgcaatgtgtgttgaccatattaatgttcctcaggatatctctaaaccaactttaatgtcagtcactattgatatttttttttcttaactgaagagtttgtccccatttgattatctagcaatggtaattaaatacccttccaggctggcactgtaaataatgctcgatagtccgtattgcaaagtttgcaaacctctggattgtagttattgtttatctgtaaataacttatgcatttttcttactgaaggtgagaggagaggctattgctaaagagttgaaccttcgccacagaggtgttacgtactccgttctcttctatgctgcttggtgtccattttcaagcaagttccggccaatatttgaagctctcagcactatgttccctcagatatatcactttactgttgaagaatcatctgcaatgcctaggtatgtaaatgttgactcctatgttgtctatatgtctctttaagtgaggcatcatgcccccttttaagtcgactcgtctgcttattatgctgtttctgcttattgtagtttgttttcaagatatggtgtccgtggattcccggccattcttcttgtaaatgagactacaatggtacgatactggggcccaaaagatctcagctctctggtggacttctataaagaaactacaggtacaagcattgctcttcttttcctgcatacaagaatcgtaacaactttcaaatatattaaacccagaaatgagaacatagcctttgggtgctatttagtttggaaactatacagttccctcgctggtaattagctgcacctgttaggattgccatgatgctttctcgatattacacaccaggatctccatcttactataatgttttaatctttcgaacctttttagtatgaaatattgatgcttgtgaatgcagacaaccattaattgtatagaatcgattccattgtccaatcaactaaacagggatatgctattgatgattagatttttttgggttgcctttgttgcttcagagcatttcttgaagtaaattatttatattgcaggcttcgatccaattgcatattttgatgtcgatcatcaagacagtactggagatttcagaccagtcacaccaggggaccgatctctgcgtaaaattgcaaaagatgagccatttgtgttgcttgcggtgctttttatcatcctgaaggttgcagcgcatttcgtccccatcgtcgtctcccatctgaaaacgttcttggtcgtgcgtgttcagaacttgaacttagggatccgtaggggatcaagccaactgttggaacgagcgctgaatgtacttgatgtgaagaggctttgtagcaagcttagactgagcaataagacaagggaccttaggaaaggcgcaagcaatgctcgagcttgggcttcctcgtttacttctgtttcactgggtgaatcatcatcctcacggcaagcttaagtgcttaaccttttcggggctgtttgtttagtgtagctgcacatgtgatccaaagttatttaatcttgcttccgcatccagctatatatgatagttgctttgttgcgccattcaggcatgtgggaacctcatggtcatgtaaattctgagggcctcaccttgttgtatactaggaataccttttgcgttgcggatgcaatgcctaatcttgttgtcaagataactactgtaaatttgagatgtgtggtgccagtttgagtagcctttagatgaatttttgttgctcctgctgctgtatgaatcattacagtgttaacctttgaagaactcttaacttggtcgttgtctgcaccagcctgaagctggggccgccgactcatgccttatttactgtgattgttatatgtacatcaccgtttataagaagctaacaaaatgtttctggaagatgctccttttgtatgtgaatctattgtttactggagatttgtgagtgcgtgccctgttcataaatctgcttctataaaattgtgggttctatct</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0806500, RefSeq:Os03g0806500