Os03g0818000

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Revision as of 13:06, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0818000| Description = Conserved hypothetical protein| Version = NM_001058239.1 GI:115456206 GeneID:4334576| Length = 5081 bp| Definition ...")
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Gene Name

Os03g0818000

Description

Conserved hypothetical protein

Version

NM_001058239.1 GI:115456206 GeneID:4334576

Length

5081 bp

Definition

Oryza sativa Japonica Group Os03g0818000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:35178024..35183104

Sequence Coding Region

35178024..35178610,35181441..35181613,35182196..35182380,35183012..35183104

Expression

GEO Profiles:Os03g0818000

Genome Context

<gbrowseImage1> name=NC_008396:35178024..35183104 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:35178024..35183104 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgcccgccgcggcccgcacgtaatcaagctgcacgactccgccccggcgctgctcggccgcgcgccgatgccgccgccgcctggcccccgagacgagctcccgccgccgtcggccgtgctggtccaccacccacgaggggggctcgcgccccaccccgccgtcgcggcgctcgaggaccggctcgccgtccgcgaccgcgacatccaggagctcctcgtcgacaaccagcggttcgcggccacccacgtcgcgctccagcagcagctcatcgcggcccagcacgagctccgggtggtgtccatcgccgccacgagggcgcgtgccgagcgcgaggatgaggtccgcgcccttgcggagcaggccgcgcgcatagaggccgaggctcgggccgccgtcgccgcgcgcgcggaggtcgaccaggtccacgcggacgttcaggtgctcgccggcgcgcgcactgaactcgtggaccggttgcaggacctccgcgggcagctcgcgcgcttccaggccgaggcgggtaagactgagtccgtccgtgcccaggttgaaaccatgcgccgggagatccagaagggcagggctgcggttgaatttgaaaagaaggcacatgctgataaccttgaacaaagtaaagcaatggagaaaaatatgattgctgtagccagtgagattgagaagctaagaggagatcttgcaaatgctgaaaagcgggccactgctgtcaccgcaacagcacctgtagctaatcctgggttccctacaacatatggcaattctgaggcaacatatccagcacctgcagcatatggtaactctgagacaacatatgcaccaacgtatggtaatactgaggcagcatatgcatcaacatatggaagttctgaggcagcatatgcagcagcatatggaaattctgatgcttatagcactaatcaggctcatacccgcaccgatggcaatcctcattacatggctccacctgttcattatgcgcagtatgacagccagcacaccaatgtgcaaagatga</cdnaseq>

Protein Sequence

<aaseq>MAARRGPHVIKLHDSAPALLGRAPMPPPPGPRDELPPPSAVLVH HPRGGLAPHPAVAALEDRLAVRDRDIQELLVDNQRFAATHVALQQQLIAAQHELRVVS IAATRARAEREDEVRALAEQAARIEAEARAAVAARAEVDQVHADVQVLAGARTELVDR LQDLRGQLARFQAEAGKTESVRAQVETMRREIQKGRAAVEFEKKAHADNLEQSKAMEK NMIAVASEIEKLRGDLANAEKRATAVTATAPVANPGFPTTYGNSEATYPAPAAYGNSE TTYAPTYGNTEAAYASTYGSSEAAYAAAYGNSDAYSTNQAHTRTDGNPHYMAPPVHYA QYDSQHTNVQR</aaseq>

Gene Sequence

<dnaseqindica>1..587#3418..3590#4173..4357#4989..5081#atggccgcccgccgcggcccgcacgtaatcaagctgcacgactccgccccggcgctgctcggccgcgcgccgatgccgccgccgcctggcccccgagacgagctcccgccgccgtcggccgtgctggtccaccacccacgaggggggctcgcgccccaccccgccgtcgcggcgctcgaggaccggctcgccgtccgcgaccgcgacatccaggagctcctcgtcgacaaccagcggttcgcggccacccacgtcgcgctccagcagcagctcatcgcggcccagcacgagctccgggtggtgtccatcgccgccacgagggcgcgtgccgagcgcgaggatgaggtccgcgcccttgcggagcaggccgcgcgcatagaggccgaggctcgggccgccgtcgccgcgcgcgcggaggtcgaccaggtccacgcggacgttcaggtgctcgccggcgcgcgcactgaactcgtggaccggttgcaggacctccgcgggcagctcgcgcgcttccaggccgaggcgggtaagactgagtccgtccgtgcccaggttgaaaccatgcgccgggagatccagaagggcaggtattctgttggtttatctcaacccccagttttaatgctaccatttcaacactaaatgtctgcttggattattcgtgatttcgtgtttacattttgtgaatgcacatgagtgttccatctcatgcattgcaaggaagaaattgtgcacttcatagcttaactttaggcctgatgaggataatgtttcacagagttggcgtgagcccgtgacttgagcacattgcttaagcgagttgtgttctttgttagtcaatcgagctgcttagagcttctacattttagcaagtcagtttgtgtttagttagagtaggttgatgatgcctcagaatttcacttagacatgtagcctgtttagatgctagtatatttgatcaatctggttttccagaacctttcgatttctgcttgcttatgtttgtatgagtccaaacctgtggcctatacatgatcacagtactgtgtttctttgtccagcaaattgctagctctatatggcactgttgtcattttaagcataattgaagtgtattagataggatgtccagggtgagttgttgaacatgctttgctcatgatttagctggagactagaaatcacttctatttcacatgttatcagcagtagttattttcacaaaaaatattcacatatacctgactaagtccagatagtctaggcctaggaataggattcttgctaagggtgttaattctgataagcctagtttccatggatatgccactgcatcggcgcttccacgcacaattcttaactcttagtcacaacactttcaagttcgaaattactaaaatgagctttgctcatcataaggcataaattataatattgtatgctggcagatgattctttgatgattggagtggtaatgtactgcccttgaaagatgaaggtggtgagaactacctattgctttcaagcactcccagctagtgttctaaaaagtggtcgtgcagccgcttaaatatggatggccatatcccatccatgcatgaccatgaaccaaacacaccctaagtgtacaaggttgccaaacctttctgagtattgtaatcgcttcgttttcaaggcttatgatgttaagtgggcagcacatgcggatatgcaacccatttaccgcatacaaggccgattaaggatgtatttggttggagggattagagtgtataggatgcgatagtacatgatacaactcagttatttgcttagaggtatggaaacgtacaacagtttgtctggttacttgtatgatatgggatggtatcgtacgggaattcgtttggtaggatgaatgaatttgatttggtaatacaaattaaccccatacagtaatgagctccatcttttgcctttcagcttattagccgttgccaaaatttgaattttaaaacttaatttgagagtttattttgaggttttttcatcgtagtttatttttcagcattggttttaaatcgctaaggacacacatataaaagttttacccacaaaattatttttgattgctgataagccattatggcttataatcagcatatgccaaacgatgggactgattatttccttttcatctatcttgtcattgcattttttttccttttttttcttaagcttcagagatcagctattaatgatgtgttgggttttcacttttgattagtccagatgtctgcctcctcctcctaggcaatgcagctagtccaccagcgaatgtttgggtgaacactgtcccgtacggcattatttttgattttttgtcgaacaagaccatccaggattttgagataatattctctaaagttggatcctaccatcccagacggattgatttggttcatccaaccaaacactgcgatcagccgaatccttgattgatcctatccatcttgaccttcacgtatcaaatggcccatgtacttttgtatgactttcatcctataaacctatgttcattgttcacacagaaagatgggttagatggtaatattgtattgtattagtgtataaaaatgcatatgtatgttcaatatatgtgtgtgtatatacttcacattttagattaaaaaaacccttaaaaccacttacaaggtcgctttccgcttaagcactacaagttgtagtgaccgcaccacaccgcttaccgcttttagaaccttgctcccagctgatgcagaattctggtgtagggttgttggatcatttaggacgtgtcttgagccccaattctggtactaccttttcacacattcacaaagctcaccagtcagcaagctttctctgagatattttatgtcatttgaacaatgccaatgcattgtgatggttctcaaataaatacaccggaagttctgagtttaagaaaagaaaaagaaaaccctctagtctagataatttcccaaatggcctcggttaggggatttccaggtaaggatcatagtgtgtagctgaggctggtgggatgggagggagggagtcctgctctcaagcttgtggagaagccatgatggctggcacaccagccgtgtggggcacaccctttgctgtgcgcctaccactgtaggtgtggacccacatgacgcaaatatagatatatcatattaatcagcgactacatctgcacatgtgcaaataaggcagtactttaccaaaagatcccaattaacacatacaggtctatataaatccacccacaaattatcctaattgactggcatagaatgcgccatcaccaccaccaactcctttttaagcagtacaggtccagatctatggataagctattttctctaaggatcttttaaattttggcagggctgcggttgaatttgaaaagaaggcacatgctgataaccttgaacaaagtaaagcaatggagaaaaatatgattgctgtagccagtgagattgagaagctaagaggagatcttgcaaatgctgaaaagcgggccactgctgtcaccgcaacagcacctgtagctaatcctggtattgcactggatctcaggagtctattgtcacttcccttttctgtgtaatcggggtgggtagccttaaattattatattcccagttttttgcatagccttttttaatagattacaattactgaacccaatggcaaatgtgaaagtttcgttcataaaattgctagttagggagacatcatgggattgcagcatttgcttttagtagtcaattagtcaatttgcagttgatgccctccattctgaaatataggtacttagttacttgtgggaatctatacccagtccaattagacaatttcctgccatggctaacaaagctcctttcaaccatatagaaacctgtaaaggcattggtatttggtaagagtgttaacttgcaagggtgattggttgggagaggtttagaagcatagcataaaagccactatccatgtctcttagcttctttcaataggtaggcttgaacttctcaaaaagttgtatggagatatttggctggacactattgaattgtcactctgaattgcattgatttgattgtatcattattttgaattggttctttcatatcctatttcagggttccctacaacatatggcaattctgaggcaacatatccagcacctgcagcatatggtaactctgagacaacatatgcaccaacgtatggtaatactgaggcagcatatgcatcaacatatggaagttctgaggcagcatatgcagcagcatatggaaattctgatgcttatagcactaatcaggttggttacattcccttatcattgttctcttgtttcatttctggtgtcaagtatatctttttgctttcattgttatgcatgtcaaaggatacgcactcaaggactgaaatccattattacttgaacagatgtattttagttagtagtttgaatatttgctcctctttttatttcactgttggtcttgaaatgattcgttgtgccatgtattgtttctgaagttttccacccctccataaggaattcaacgaaatatgtctttttagtgaaggaaaacatggatggtagcccattgtattctataacctataggtgtaactcttttacatcttcccctgtcaacgtcaacagcattaggtatttacaagctacattttgtggtctatgctataggttaattagtatgggtaccacttgctctaaactgtaaagtgtaaacatatgctctgttctattagggactaatagttcctggtgagggaaaaccattaaagcttctctcccttaattgttggatcatgggtgtattttgaatttggtttctgttccaggcttgaaaataccaaattatgctccaacttcctagtgcctctatatattattagtgattgctgtgtcttctttatcacaggctcatacccgcaccgatggcaatcctcattacatggctccacctgttcattatgcgcagtatgacagccagcacaccaatgtgcaaagatga</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0818000, RefSeq:Os03g0818000