Os03g0818300

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Revision as of 13:06, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0818300| Description = Zinc finger, PHD-type domain containing protein| Version = NM_001058242.1 GI:115456212 GeneID:4334579| Length = 3589...")
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Gene Name

Os03g0818300

Description

Zinc finger, PHD-type domain containing protein

Version

NM_001058242.1 GI:115456212 GeneID:4334579

Length

3589 bp

Definition

Oryza sativa Japonica Group Os03g0818300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:35193880..35197468

Sequence Coding Region

35194230..35194487,35194568..35194688,35196741..35196963,35197095..35197127,35197253..35197361

Expression

GEO Profiles:Os03g0818300

Genome Context

<gbrowseImage1> name=NC_008396:35193880..35197468 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:35193880..35197468 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaaatggcccccgcggcgcaggtggcgtcgaacccgcggacggtggaggacatcttcaaggattactcggcgcggcgcggcgcgctcgtccgcgcgctcacctcagatgtggacgagttcttcgggctctgcgacccagataaggagaatttgtgcctgtacggcctcgccaacgggagctgggaggtggcgctgccggcggaggaggtgccgccggagctgcccgagccggcgctcggcatcaacttcgcccgcgacgggatgaaccgccgggactggctctccctcgtcgccgtccactccgactcgtggctcgtctccgtcgccttcttcttcgccgcgcggctcaacggaaacgaacggaagcggctcttcaacatgatcaatgatctacctactgtatatgaagcattggttgacaggaagcacgtcagggataggtctggtgtcgatagcagcggaaaatccaaacattcaacaaagagaacaggcgaagggcaggtaaagcgctccagggttgtcgcagaggagtacgaggacgacgacgaagaacacaacgagacattctgcggaacttgcggtggcctctacaacgcgaacgagttctggatcgggtgcgacatctgtgagcggtggttccacggcaaatgcgtcaggataaccccggctaaggcggagcacatcaagcactacaagtgccctgactgcagcagcagctcctccaagaaaaccaggctatag</cdnaseq>

Protein Sequence

<aaseq>MEMAPAAQVASNPRTVEDIFKDYSARRGALVRALTSDVDEFFGL CDPDKENLCLYGLANGSWEVALPAEEVPPELPEPALGINFARDGMNRRDWLSLVAVHS DSWLVSVAFFFAARLNGNERKRLFNMINDLPTVYEALVDRKHVRDRSGVDSSGKSKHS TKRTGEGQVKRSRVVAEEYEDDDEEHNETFCGTCGGLYNANEFWIGCDICERWFHGKC VRITPAKAEHIKHYKCPDCSSSSSKKTRL</aaseq>

Gene Sequence

<dnaseqindica>2982..3239#2781..2901#506..728#342..374#108..216#gtccggctcggctcgtcggcgacgcctcgcaccgtcgccgctcaccggcgctcctccgccgccgctcgccgccggaggagggatagagtgctcgtcggtgcggtttgatggaaatggcccccgcggcgcaggtggcgtcgaacccgcggacggtggaggacatcttcaaggattactcggcgcggcgcggcgcgctcgtccgcgcgctcacctcaggtaaggtctccccgcgtccgcgtccgcgtccgcctccgcctcctccagttcgtgcggcactgactccctgcgcagatctaacgctaggcttcgcgtctgtctgtctctcgtgtgctgccgtgcagatgtggacgagttcttcgggctctgcgacccaggtgagttgagtgagggggtggattcgatttccgctcgcggcgaggtgttcgtccgggtgcgtgtgggcggcggtggatccgggtggtggtggtggtggggggactgagcggatcggatttgccttttgtagataaggagaatttgtgcctgtacggcctcgccaacgggagctgggaggtggcgctgccggcggaggaggtgccgccggagctgcccgagccggcgctcggcatcaacttcgcccgcgacgggatgaaccgccgggactggctctccctcgtcgccgtccactccgactcgtggctcgtctccgtcgccttcttcttcgccgcgcggctcaacggaaacgaacggtactactcgctcgcatccgcaattccgcataccttccccgaattcaatttcttggctggaaaaaaaagaaagtcagtaaaattttcagtgtctctttcctgacagaaagatttgtgcagttcaaagctgcctttcggtacagtagtttgcttgattgttaggtgaaggaggattcgcgtgatcgatttcatggtctaatttttgtttcagttggcgcatgtgtctgcatgtgcacatgtatcccgtgctcttctttttgtttcctttctttgctttgagtgaattggagtcatgcgttctggatgtgctggctgtagtgtactggccgttctatgtgagttttacatccttacccttctttcatgatagaattatcaattcatactctagggttcatattgattcatggtagctgctcgtaagaatttagtgcctatcctatcccattttagtttttgaattgaaaaacttttccagaacttgatttaatgagtcgcagagtctagcaaatgcaggctttaaagattgaagtagcacctacaagactcttatattaaatgaagggccattcatttctgcatttttctggcatgtcaactgcgccacaacttactccatttcattgtggttggagaaggtgtacatttactagtactagttgatataggagtaatgtgtatacggagcaaatatgacaatacgtgtatatgcctacatagtactattcccgtcttaaaataagttcacttttatacataaatctagacacttattttgggacagaggtagcaagccattacttgattccttggtcaagtgctatgcaagtaggtctctattattctccttttagagcttttggcattttagctggcatgatatatcatatatgaccaaattattctaagattttcgtagcatttgttaccagaaattttagattagtagtggagtttagcacacaatgcatgccagaaaaatatgctttccatctacttatgtacttcatgatgtatctgtgctgaagttaaattttctttactaaggtgaataaatcaatgaggtcatgacaaaaggagtacttgatgctcgcatcgatgttaagcatcaaaatgccccttatttcagctttcttgttcatcccatcgttgttcatttgtctagagacagttgtagctaattgcgggtatgggatgttatatctagaacttaggagcacataatgacattttctgctagacataatcctaccacttttattccaatatagtctactgctggtatgtcgacaatgcaatcaaagggattaggcaacatatttaggctttacttattgttcaactctgcgcatatagtttgtggcagaggtgttctgttgataaaagcgataacttgtttcttcttagtttaagaagtctgcgtatgctatgtcctggtatgctattagggtcgtaatccagaatctcgtgttttccacatcaatgtatttctctgtactagtttagttttatgttattcatttttttcttcttatttttcaggattagatgtgtattttaactgaagaaatgatgtatagtatttctgtttatgctactgagctactctattatactacatgttagtcacttagtctcgtctttggcatgctatccatgatggtgtgttactattctcatgtacatgtatctgccccatcaccttaaaattcaatgtttgccaaaaaaaaaaaagttccgcaatgcttacgagtagtttctttgctgctgactgtatgttgactttaggctgttactgaatactctcccgggctaataatattagtcattttgaacaagggtaaagtcaaactttaaaatctttgactatctaaaatatttatcttaaaaatatggaaacatatgtgtagattagtcttaaaaaatacttcaataaaattatatatttgttgatatttctatatatattataatagaaaatagttgctaaagttactttttggagaccatgcgcttggagggagttacaatattgctccttttgtttctcaggaagcggctcttcaacatgatcaatgatctacctactgtatatgaagcattggttgacaggaagcacgtcagggataggtctggtgtcgatagcagcggaaaatccaaacattcaacaaaggttagtatttccctcccccaaaattcagaaacttcaaatgcagttacttcagattttgtaacctaagctacaatacacagagaacaggcgaagggcaggtaaagcgctccagggttgtcgcagaggagtacgaggacgacgacgaagaacacaacgagacattctgcggaacttgcggtggcctctacaacgcgaacgagttctggatcgggtgcgacatctgtgagcggtggttccacggcaaatgcgtcaggataaccccggctaaggcggagcacatcaagcactacaagtgccctgactgcagcagcagctcctccaagaaaaccaggctataggttaaattgtggtgtgtgcaatctcctctgaccaatctgatcaaacgacaatctgtcctgccactaggaaaaaaaagatggtgaagctgttcttcggtccaatgtcgtagcttagctagatgtgaagtcatctagacattgtgctgtgtggtagatgaggcaaaaaagagtgaactgaaaagacgggaaaaacgtattcgatctttagctttgttttataaatgttttcttcattgtcaccgatgtgctttgggttttttcagacttcagagcatgggtatcgttgttgaattgtagctgcatgcattgcatgatatatttgtcaagtgctcaacaactggagcattccc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0818300, RefSeq:Os03g0818300