Os03g0819900

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Revision as of 13:06, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0819900| Description = Similar to RAB8C| Version = NM_001058251.1 GI:115456230 GeneID:4334590| Length = 3282 bp| Definition = Oryza sativa...")
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Gene Name

Os03g0819900

Description

Similar to RAB8C

Version

NM_001058251.1 GI:115456230 GeneID:4334590

Length

3282 bp

Definition

Oryza sativa Japonica Group Os03g0819900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:35257826..35261107

Sequence Coding Region

35258098..35258170,35259561..35259633,35259719..35259819,35259905..35259970,35260059..35260156
,35260473..35260535,35260681..35260773,35260844..35260921

Expression

GEO Profiles:Os03g0819900

Genome Context

<gbrowseImage1> name=NC_008396:35257826..35261107 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:35257826..35261107 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcgccgccggctagggctcgggccgactacgattatctcatcaagctgctcctcattggcgacagcggtgtaggaaaaagttgtctcctcctacggttctcagatggctctttcacgactagtttcattaccacaattggtattgacttcaagataaggaccgttgagttggatggtaaacggattaaattgcaaatctgggatactgctggccaagaacgctttcgaactattaccactgcttactacaggggagcaatgggcattttactcgtttatgatgtcaccgatgaatcttcattcaacaacataagaaattggatcagaaacatcgaacaacatgcctctgataatgtgaacaaaattttggtggggaacaaagctgatatggatgaaagcaaaagggctgtacccacttcaaagggacaggctcttgctgatgaatacggaatcaagttctttgaaacgagtgcaaagacaaacctgaatgttgagcaggttttcttttctatagcaagagatatcaaacaaagactctcagagactgattccaagcctgaggaccgaaccatcaagatcaaatcggaaggggaagccgaggcagcggcggctcagaaatcagcttgctgtggatcttag</cdnaseq>

Protein Sequence

<aaseq>MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSF ITTIGIDFKIRTVELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESS FNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSA KTNLNVEQVFFSIARDIKQRLSETDSKPEDRTIKIKSEGEAEAAAAQKSACCGS</aaseq>

Gene Sequence

<dnaseqindica>273..345#1736..1808#1894..1994#2080..2145#2234..2331#2648..2710#2856..2948#3019..3096#gcggtgcttcgatccccctctccgcctcgcgaatctcctcccctcccccacgcaactcgccgcctgcgctgccgctgctcgtgagggggagacgacgccggaggagatcgccgccgccgccgccgccgcctcggacggccgcgcccccccgccgcgcgtgtaccacggtattgcggctcgccattgctcgttttcggcttgctgtttcgttgcttgatccgatctgatcgatgttgattgtgtgttagggcttgggggattgattggtagcgatggcggcgccgccggctagggctcgggccgactacgattatctcatcaagctgctcctcattggcgacagcggtgagtagccgcgggcccctcctctctctctcactccctcgatctacgcgcgcgagatctggttcctccggcgtgaagtgtgttgtttcgtttgatccgaggattcgagcgggatctgttatctggatcagtttgtggggatttttttttgtgtgtgtgtgtgaaatttgaatgggtgaatgaatcgaagcatgcgaaaccgttggcaacaattgtttcagttttctacgcataagtgttttgtaatagcgattctgttcctgcttgcgacaatcatgtgattatgacctgatatattctcaaactgagacacacattaaaatgctggtattgttagattgatcgccatatgaagtcatgaatagtttattggtgaaactaacgcctgtaagtagctgttgtggttacttttgtttgttgtaagggttctcattaagtcattataagagaactgacaatggtttcaacactttcacctgatgacctgacgtgcactgttggaacctcgctctgtgttttttttagccgttgaggcaagccaagttcaaggctgtggttcgtctcaggcctgggagctgctgagattcatatgttttagaattttgcgcaggcttaggctccaagtatattctatgatattttcacccagcccagccctcccaccacagtattttgaggctcgaataatatttgtaccacataaaagtttactaaagggtttctgtaatcatgctgtttgttttctactatgtgaaagcattgttcattttcatccttgaaagagtaaatatttgaggatatgtgtaaaaatcatacaataacatttccttcccactcactagcagctttgcaagcagagttcaactaaactatcttccttgtgcttatgtggcctggtccatatttacggtatggtggtcttctagtttgacaataaaatgaaactggtacctccgtttcataatataagtcactttgattttcttttcctagtcaaacttaattaagtttggccaagtttatagaaaaatataacaacattttcaatacaaaacaaacatgctatcaaaatatatttaattttagttctgatgaaactaatttggtgcagtagatattgttaaatttttctatagacttggtcaaacttaaggaagtttggctagaaaaaaagtcaaagcgacttataatatgaagcggagtgagtaaatagcatctgtctggttctgtgtacctaggggagccctttaactcatgttgattttgtttccacatcaatgttttttcttgtatttgtatttccttttgtggccttacttgatattcatactatgtttcagtgtttagtggcacgtacattctatttaaaaggtttatatacattatacaggtgtaggaaaaagttgtctcctcctacggttctcagatggctctttcacgactagtttcattaccacaattgggtatgtcctgtaaaaagtccccaaaggaaacatctgaatgatagcatcaccttatatattgtcctcactgaattctctgaaacagtattgacttcaagataaggaccgttgagttggatggtaaacggattaaattgcaaatctgggatactgctggccaagaacgctttcgaactattaccactggtatgtttgtttactttcaacaaagctaagtttgcttctggcaattgcattgatcaagcttctgaaatgggcttcattgtttcagcttactacaggggagcaatgggcattttactcgtttatgatgtcaccgatgaatcttcattcaacagtattgaccactttacttcagatgctttgtttgatatagtacttaagctcaaaaatttctgaatatttccattgttgctggatttcagacataagaaattggatcagaaacatcgaacaacatgcctctgataatgtgaacaaaattttggtggggaacaaagctgatatggatgaaagcaaaagggtataatctacttggcttagctgtttccacatgtttattctgtcatctcatttttatttcatgctctggaatggttagtttcatatgcagtatgaaaaacatttcgtgaataagatttgcatcctgtggtgttactctgatccatctagcatggtcatcactagatatatttatgttgtgtcaaagcgtaaacataatagaaaacgtgttcgacattatgcacctaccattacagttcccaatgaccttctcaaattgtatgtttggaatatttcttagctctcttattcatatcggctgaatttcattcgtgcaggctgtacccacttcaaagggacaggctcttgctgatgaatacggaatcaagttctttgaaacggttagtgcgaagtcacaacttctgttctggtattccttcatcgtaacttgttggtgacaataaatgttgctttctcctaagcattgatgcccgaacctctgtagccaatcccatgcataatttcgtttcattatgactactgcagagtgcaaagacaaacctgaatgttgagcaggttttcttttctatagcaagagatatcaaacaaagactctcagagactgattccaagcctgaggtatgaattaactggtttgacatactttttttcaataacgcctttccttattgtgttcttttgattgcaggaccgaaccatcaagatcaaatcggaaggggaagccgaggcagcggcggctcagaaatcagcttgctgtggatcttagaagggttctcactacatggataaaatggtggtgaaatggtgcttgtaatttttatcatttcattctttgtcagctactctctttgtgcgttatttaacttattgcaattgtcttgatttggacaaatgggtgttaagtgagaacaattactttgaatattggtggaaagtaactcttgctcttgat</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0819900, RefSeq:Os03g0819900