Os03g0821300

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Revision as of 13:07, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0821300| Description = Similar to TA11 protein (Fragment)| Version = NM_001058261.1 GI:115456250 GeneID:4334600| Length = 3655 bp| Definit...")
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Gene Name

Os03g0821300

Description

Similar to TA11 protein (Fragment)

Version

NM_001058261.1 GI:115456250 GeneID:4334600

Length

3655 bp

Definition

Oryza sativa Japonica Group Os03g0821300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:35325449..35329103

Sequence Coding Region

35325724..35325839,35325977..35326241,35327311..35327424,35327518..35328942

Expression

GEO Profiles:Os03g0821300

Genome Context

<gbrowseImage1> name=NC_008396:35325449..35329103 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:35325449..35329103 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcaactccctcgcctgcttctgctgcggcggcggcgccggcggccgaggcggccgccacgtcgcccccgccgcgctcccctccgacccggcctacgacgagggcctgggccactcgttctgctacgtccgccccgacaagttcgtggttcccttctccgcggatgatttggtggctgacgcgaaggcggccgcggcggcggagggggaggcgaccacgttccgggcgatatccggggcggcgctcagtgccaacgtatccacgccgctgtccacgtccgtgctgctgctgatgccggaggagtcgtcggcgtccgccaccgcgtcgtcggggtttgagagctcggagtcgttcgctgctgtgccgctgcagccggtgccgaggttctcgtccgggccgatctccgcgcccttctccggcgggttcatgtcggggcccttggagagggggttccaatctgggccactcgacgccgcgctcctctcgggccctctccctggcaccgccacctccggtcgtatgggtggcgccgtccctgcgctccgccggagcctctcccacggtggccgccgcctccgcaatttcacccgcgcgctcctcgcgcgcaccgagaagtttcaggattctgcggatctaggctcgccggacgccgccgccgccgccgtcgccgcctgtgggggcgatccctgtggtctgcagtgggcgcaggggaaagccggcgaggaccgcgtccacgtcgtcgtgtcggaggagcgaggctgggtgttcgtcggcatctacgatgggttcaacggccccgacgccaccgacttcctggtatccaacctctacgccgccgtccaccgcgagctccgcggcctcctctgggatcagcgggagcagaacgtgcagcacgaccagcgccccgaccaacccggctcagccccaagcaccacggcctcagataaccaagaccagtggggtcgccgccgccgcacccgccgctcaagaccgccgcgtggcgccgacgacgaccagcggcggtggaagtgcgagtgggagcaggagcgggattgctccaacctgaagccaccaacgcagcagcgtcttcgttgcaacagcgagaacgaccacgtcgccgtgctcaaggcgctgacccgtgcgctgcacaggaccgaggaggcttacctggacatcgccgacaagatggtcggcgagttccctgagcttgcgctcatgggctcttgtgttcttgccatgctcatgaaaggagaggacatgtacatcatgaatgttggcgatagccgggctgtgttggcaacaatggacagcgtcgatctcgagcagatcagccagggttcattcgatggatcagtcggggattgcccgccatgcttgtcggccgtgcagctcacgtcggatcacagcacttcagtggaagaggaagtaatcagaatacgaaacgagcatcctgatgatccatctgccatctccaaggatcgcgtgaagggctcgctgaaggtgaccagagcatttggtgctgggtttttgaaacagcccaagtggaatgatgcactcctggagatgttcagaattgattacgttgggtcctccccatacatatcatgcaatccatccctttttcatcataagctcagcacaagggatagattcttgatattatcttcagatggactttaccagtatttcaccaacgaggaggcagttgctcaggtcgaaatgttcatcgcaacaacccctgaaggcgaccctgcccaacatcttgtggaggaagttcttttccgtgctgccaacaaagcaggaatggactttcatgaactgatcgagataccacatggtgatcgtcggcgataccatgacgatgtatctgtcatcgtcatctctttggagggcaggatttggagatcctgcgtgtaa</cdnaseq>

Protein Sequence

<aaseq>MGNSLACFCCGGGAGGRGGRHVAPAALPSDPAYDEGLGHSFCYV RPDKFVVPFSADDLVADAKAAAAAEGEATTFRAISGAALSANVSTPLSTSVLLLMPEE SSASATASSGFESSESFAAVPLQPVPRFSSGPISAPFSGGFMSGPLERGFQSGPLDAA LLSGPLPGTATSGRMGGAVPALRRSLSHGGRRLRNFTRALLARTEKFQDSADLGSPDA AAAAVAACGGDPCGLQWAQGKAGEDRVHVVVSEERGWVFVGIYDGFNGPDATDFLVSN LYAAVHRELRGLLWDQREQNVQHDQRPDQPGSAPSTTASDNQDQWGRRRRTRRSRPPR GADDDQRRWKCEWEQERDCSNLKPPTQQRLRCNSENDHVAVLKALTRALHRTEEAYLD IADKMVGEFPELALMGSCVLAMLMKGEDMYIMNVGDSRAVLATMDSVDLEQISQGSFD GSVGDCPPCLSAVQLTSDHSTSVEEEVIRIRNEHPDDPSAISKDRVKGSLKVTRAFGA GFLKQPKWNDALLEMFRIDYVGSSPYISCNPSLFHHKLSTRDRFLILSSDGLYQYFTN EEAVAQVEMFIATTPEGDPAQHLVEEVLFRAANKAGMDFHELIEIPHGDRRRYHDDVS VIVISLEGRIWRSCV</aaseq>

Gene Sequence

<dnaseqindica>3265..3380#2863..3127#1680..1793#162..1586#atattccggcatttcaaccccacccactccgcacccccgcaagtcaactctcttccttcctcctccgtgcttaatgctctccgcattataaccacccacctctcctcctccccccacctcctctctctctatctccatctccaccgctacgcttcccagccatgggcaactccctcgcctgcttctgctgcggcggcggcgccggcggccgaggcggccgccacgtcgcccccgccgcgctcccctccgacccggcctacgacgagggcctgggccactcgttctgctacgtccgccccgacaagttcgtggttcccttctccgcggatgatttggtggctgacgcgaaggcggccgcggcggcggagggggaggcgaccacgttccgggcgatatccggggcggcgctcagtgccaacgtatccacgccgctgtccacgtccgtgctgctgctgatgccggaggagtcgtcggcgtccgccaccgcgtcgtcggggtttgagagctcggagtcgttcgctgctgtgccgctgcagccggtgccgaggttctcgtccgggccgatctccgcgcccttctccggcgggttcatgtcggggcccttggagagggggttccaatctgggccactcgacgccgcgctcctctcgggccctctccctggcaccgccacctccggtcgtatgggtggcgccgtccctgcgctccgccggagcctctcccacggtggccgccgcctccgcaatttcacccgcgcgctcctcgcgcgcaccgagaagtttcaggattctgcggatctaggctcgccggacgccgccgccgccgccgtcgccgcctgtgggggcgatccctgtggtctgcagtgggcgcaggggaaagccggcgaggaccgcgtccacgtcgtcgtgtcggaggagcgaggctgggtgttcgtcggcatctacgatgggttcaacggccccgacgccaccgacttcctggtatccaacctctacgccgccgtccaccgcgagctccgcggcctcctctgggatcagcgggagcagaacgtgcagcacgaccagcgccccgaccaacccggctcagccccaagcaccacggcctcagataaccaagaccagtggggtcgccgccgccgcacccgccgctcaagaccgccgcgtggcgccgacgacgaccagcggcggtggaagtgcgagtgggagcaggagcgggattgctccaacctgaagccaccaacgcagcagcgtcttcgttgcaacagcgagaacgaccacgtcgccgtgctcaaggcgctgacccgtgcgctgcacaggaccgaggaggcttacctggacatcgccgacaagatggtcggcgagttccctgagcttgcgctcatgggctcttgtgttcttgccatgctcatgaaaggagaggacatgtacatcatgaatgttggcgatagccgggctgtgttggcaacaatggacagcgtcgatctcgagcagatcagccagggttcattcgatggatcagtcggggattgcccgccatgcttgtcggccgtgcagctcacgtcggatcacagcacttcagtggaagaggtgattgaatcgactcatatcatggttcaatcctattggaattgctgttcttaatgttgcttaagtctcatatttgtttctgcctgaatacaggaagtaatcagaatacgaaacgagcatcctgatgatccatctgccatctccaaggatcgcgtgaagggctcgctgaaggtgaccagagcatttggtgctgggtttttgaaacaggttagttcatttgaatatgccctttttttttgcagaaagacatttttttgtgctccgttatgattaagcgttttgccattggccaagtttcaaagttgcgtatgtggatttattttttggcaagtaatatgcaatttcagaatgacacaattagtcaatgtatgaaataagtatgtgacctgacttccttccttgaatttgggatctgtattgatgataaagcatacggtccaaacttgattataccaggagcggaataattaaggtcagttttgctgctatcctgagtcaaacacataattaaggtcataattaaactaggtcagaaaaaggaaaactggatctggtctaattggtccaaagtttgaaaagtaaagtgagccactctaaattctcacttctttggggtgagaaatatgaccatcctacactgaaactgaccatgtctgacggggacatcataaaccatatgctaatttcaatgggcaaaaacttcaacgcatgaaaactaattagttaaattcttgagtcaccgcgtgtatagccagttcaaaattttgaatgagaagctgctccaagagaaaatgaagtttcttttgcttctgtccaagtacaaagaatctgcttgtgcagtactaaaatgtggccagaaaagagtgagttgagtggctttgaaggaaggtacgtttctcctcccatgcgaagaactattctctattgtcaactgcacaaatctatcttgctgctatgcaagagggaagtctctttcttggacataaagtgagctatctgatgagacagacatggcgatctgcgatattttgtcaatgaagaaatcccccaaagttaagcagcacagagaattgaacaagtgcatgaggcagccctttctactgatttagttgtcggtacaattttcagatagcctggttggaagttgcaaatagttaattttacaagcaaatccatagcgaacaatacatgcatcatttgtttttgctctctgtctgcaccttatatcataattccttagcattttgatctcacaattctctctcttttttaacagcccaagtggaatgatgcactcctggagatgttcagaattgattacgttgggtcctccccatacatatcatgcaatccatccctttttcatcataagctcagcacaagggatagattcttgatattatcttcagatggactttaccagtatttcaccaacgaggaggcagttgctcaggtcgaaatgttcatcgcaacaacccctgaaggcgaccctgcccaacatcttgtggaggaagttcttttccgtgctgccaacaaagcaggtgtgtttgcaaagaagtcaccatacatgtcaaatgtgtcgacctcattttgcagtaacttttgaacttctagaacatgatgctgaattttgtcagtcaatgacctgacctcatttttacatctattgctgttgcaggaatggactttcatgaactgatcgagataccacatggtgatcgtcggcgataccatgacgatgtatctgtcatcgtcatctctttggagggcaggatttggagatcctgcgtgtaaatagaaacaatagtaggctagtgaaacaaaacgtatagagggggttcttcccatgccttccttgagctgagaggtgttcttgcggctactctactcctcttcccccagttgctactgtacaatatcaaccaagcactgtggggggttggattcggcttgggctctcggcacatccagctgaatcgccatgaatcgcccgcagggctggccgcgtggtataatatgttgatgtaaatgaggatttgttcaattattaataatttataaaatcgacc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0821300, RefSeq:Os03g0821300