Os03g0821900

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Revision as of 13:07, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0821900| Description = Similar to Protein kinase APK1A, chloroplast precursor (EC 2.7.1.-)| Version = NM_001058265.1 GI:115456258 GeneID:433...")
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Gene Name

Os03g0821900

Description

Similar to Protein kinase APK1A, chloroplast precursor (EC 2.7.1.-)

Version

NM_001058265.1 GI:115456258 GeneID:4334605

Length

4760 bp

Definition

Oryza sativa Japonica Group Os03g0821900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:35353714..35358473

Sequence Coding Region

35354051..35354114,35356059..35356384,35356548..35356683,35356798..35356940,35357027..35357150
,35357709..35358190

Expression

GEO Profiles:Os03g0821900

Genome Context

<gbrowseImage1> name=NC_008396:35353714..35358473 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:35353714..35358473 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggaattgctgtgggtggggcgcgcggatcaaggatgggagcccgcaaccgggagcctctgggatgttctcaaggagtggtgctaaagatgggagtaggcttagtggctgcagtagtcgagcctcttcagcttccatgcctccaactgcgaaaactgaatgtgagatactgcagtcagccaatgtgaagatcttcagttttagtgatctcaggatagccacaaggaacttccgtcctgacagtgtacttggtgaaggagggtttggatctgtctataaaggatggattgatgagaatacattatctgcttgcaagcctggcactggaattgctgttgctgtgaaaagactcaaccaggagagtttgcaagggcaccgagaatggttggcagaagttaattacctaggtcagttttgccatcccaaccttgtgaagctatttgggtattgcttagaggatgagcatcgactgctagtgtatgagttcatgccacgtgggagcttggaaaatcatctgtttaggagaggttcgcatttccagcctctttcatggaacctaagaatgaaggttgcacttggagctgcaaaaggactagcttaccttcacagttcagaggcaaaagttatttatcgagatttcaagacttccaatattctgcttgacacagactattctgcaaagctatctgattttggattggcaaaggatggtcctgttggtgagaagagccatgtatccacgagggtgatgggaacatatggttatgctgctccagaatatctttcaacaggccatttaactgcgaagagtgatgtttatagctttggggtggtgctgctggagatgatgtcaggtcgtcgtgccattgacaagaaccggccccagggtgaacacaatcttgtggaatgggcccgaccatacctcacacataagcgcaagatattccgtgtcctggataccaggctagaaggtcaatactctcacgttggagcacaaacagttgccacccttgctcttgagtgcctgtcgtacgaagctaagatgaggccttctatggaagctgtggtcactattcttgaagagcttcaagaatccagccatgtggacaggaaaccagcagcagagaggcgtcaagaatccaccacaggtacaggcaaaaaagcccctactgcaaatgctagcaagaacagcggtaagcctcgtcggaaaagcttgggagaaactcgggaaaagattggtccgaatccaacagcattggtccgctcccattag</cdnaseq>

Protein Sequence

<aaseq>MGNCCGWGARIKDGSPQPGASGMFSRSGAKDGSRLSGCSSRASS ASMPPTAKTECEILQSANVKIFSFSDLRIATRNFRPDSVLGEGGFGSVYKGWIDENTL SACKPGTGIAVAVKRLNQESLQGHREWLAEVNYLGQFCHPNLVKLFGYCLEDEHRLLV YEFMPRGSLENHLFRRGSHFQPLSWNLRMKVALGAAKGLAYLHSSEAKVIYRDFKTSN ILLDTDYSAKLSDFGLAKDGPVGEKSHVSTRVMGTYGYAAPEYLSTGHLTAKSDVYSF GVVLLEMMSGRRAIDKNRPQGEHNLVEWARPYLTHKRKIFRVLDTRLEGQYSHVGAQT VATLALECLSYEAKMRPSMEAVVTILEELQESSHVDRKPAAERRQESTTGTGKKAPTA NASKNSGKPRRKSLGETREKIGPNPTALVRSH</aaseq>

Gene Sequence

<dnaseqindica>338..401#2346..2671#2835..2970#3085..3227#3314..3437#3996..4477#agcagccagcagcagcggcgtggctgcgcgggccgcctcgctccctctccctctccgcttggccgcttcccttgcccccgccattaactcctcactcgctcgcctcacctcacgcgccgcacgccacatctctcgccagcgagcgcacctcgtcctcgtcgctatatagccaacgcctccgcctccgcctccgcctcgcgcttggtgtcccccaaaaccctaggtggagctctcctcccccctcaccccatgcggcgccgccgggtcgggacggcgggagggttggttcgatcctgactgggctcggcgccgcgggcgagtcgcttgttggagggggatggggaattgctgtgggtggggcgcgcggatcaaggatgggagcccgcaaccgggagcctctggtatgcttcgcgatccttcctctctctctctctcttgctgcctgcgtgcgtgcttgctttgcctggttatggtgctgttttgtttcatgattcgatgggttgccggcttcaatcgcgtagatgcatgattccttcagtccgtttccattttactcggattgtttatgccacgagatgtgatggcatgttcgattagtttatggtgattccggtggagtttcgaagccgtggagtctttgttgctgcgcagaatttagcttgtgttgcaatcgtatgaacattagcattcgggttattttcttctagaaattttgatttccacagtacaggtgaataagctacttcgatcttgtttggatgatttggcttgttagataggcatactcctgatgatccaattgttaatttgactagatgatttcaaccctttagctacaccgtggcatcctcaatatgttaagctatgtgccaacgtaagactttacaatcactttttttttagagaagtttagttcaagcttcggctgtgctgtgcctgtaaggctctgtaggtggttgtgccattggagctaaggccttaaattattaggtgagggggtacattcttatgtgtattgatggggatatccaggcttcattcattgcttgatatcgttaactagtaccatgtgtagtaatgttgtactaccatctactggatagacccagtactggattcctccaaccatggcagctcgtaattggcatgacgatgtctataatatattgtgttgacgacgaaaggtaacatttgattgaagcaagtctgctagtaatgcgtatagtaacctttttatggcattctgttgtgaatatttgcagttgacatattatatgttcttgttgcaaaatgtctcaaaagaatttatgggacagcttgttaagaaaaacaatactgttagattagttgtttctctattgcaattgattttttttatgtgttgttagttcataaattattgatagaatgaggaaaaatcttagattcttatttagtttgaatttgatgctatggtatgagattggatcgtgtgtgttttttactcgtcctgtctatttaatttggtttgccgcccagatttagcaatgttctgtcaataattgattatgtactttacatggcttgaggcggttagacataacatcacaaaccttttctcttttccagttacaacatacactttttggttgtatcaagatcgattatttgcttagtattcagtaatctgaatatatgaaaatgaccgtgtatgcctcattaaagttctatgtaattacaaagactatagctcacttctatgtcaggtgcttcattttgatttgaacttagttgattcatatcataacggctacttaagaaatgtattattactaaagatagagtagataaatatgagctttctggagagccgcatggtagcggatgtacttctgatggaataaggttactagcgcatatgattgtttccagtttctggttgggtgggaactccccctgttcccattatattcatggctactactctatgcaaaatcgtcattttgttattttaaaccagagcacatcatcattcgtaagctgatagcaaatctagtatatctagtagtgctacatgtaggcgcgtggcaattggctgatagcaaatccttcatctgtcaggactcataccaaattttagcgaaggatcaactgatgattgatttagttgattcctaattaatgtgcaaagcttccttttaaaaatagaattgaacattcagaacattatatacattattactgtgctatcatactatggacctgggaaagattagtactgggacttttttctagagaacttctagattacagctaaatgcagtcatgtgctttctactcattataactgtaccaaatgtatgcagggatgttctcaaggagtggtgctaaagatgggagtaggcttagtggctgcagtagtcgagcctcttcagcttccatgcctccaactgcgaaaactgaatgtgagatactgcagtcagccaatgtgaagatcttcagttttagtgatctcaggatagccacaaggaacttccgtcctgacagtgtacttggtgaaggagggtttggatctgtctataaaggatggattgatgagaatacattatctgcttgcaagcctggcactggaattgctgttgctgtgaaaagactcaaccaggagagtttgcaagggcaccgagaatggttggtgagtatgactgctattctatgttgtgttgccttcaaatccatgcttgttttaagtataccattggatacagcttttgtcaatcatatacttgttttttttatccttttgaaaggttacttggatattttctaactttgatgtataaatattcaatatgtaggcagaagttaattacctaggtcagttttgccatcccaaccttgtgaagctatttgggtattgcttagaggatgagcatcgactgctagtgtatgagttcatgccacgtgggagcttggaaaatcatctgtttaggagtaagttaaaacaagacctgttccactgctcatctgggggcattcttttcatattgcatacactattgccacgtgttccttttatcataaattgctatctgaatcatgttgcaggaggttcgcatttccagcctctttcatggaacctaagaatgaaggttgcacttggagctgcaaaaggactagcttaccttcacagttcagaggcaaaagttatttatcgagatttcaagacttccaatattctgcttgacacagtaagtgaaagtaaatctttgataaccaacttcacttcagtgcgcatgtatccctgctgaaaggaatgtattatattactgttcaggactattctgcaaagctatctgattttggattggcaaaggatggtcctgttggtgagaagagccatgtatccacgagggtgatgggaacatatggttatgctgctccagaatatctttcaacaggtaacctgtgaagtgtagtttttggtattcagttttctccatgttttctgatcttggattagaaaattcatacattggcaggccaggtagttgtctacagtaaattacatgaattgttatagctataagcatattaataacgtggaattgttttttacgcatcctccacatcggaaatgtcattttatgacattctttgcattgttgactttgggaatgtgatctagcttagaatctaactcatctaagcatgaacatatgaacactccaatgtattgctttccatgaatttcatatacaccttttctgcatgcgcactccttggggaatgatatatatggcttgatgtttagtttaatctcaattgcaaaatgtacatggaaggatgttgggaaacaaatcattgtttgccatacgttgtgagcttttatttactgtggacctgttgcaattatgtgcatttagtgatttacatcaccgtgttatttttagaacgatgtaccagaagtgcatgtacaatatgccttgagctttgttttattgtatcaatactttcaggccatttaactgcgaagagtgatgtttatagctttggggtggtgctgctggagatgatgtcaggtcgtcgtgccattgacaagaaccggccccagggtgaacacaatcttgtggaatgggcccgaccatacctcacacataagcgcaagatattccgtgtcctggataccaggctagaaggtcaatactctcacgttggagcacaaacagttgccacccttgctcttgagtgcctgtcgtacgaagctaagatgaggccttctatggaagctgtggtcactattcttgaagagcttcaagaatccagccatgtggacaggaaaccagcagcagagaggcgtcaagaatccaccacaggtacaggcaaaaaagcccctactgcaaatgctagcaagaacagcggtaagcctcgtcggaaaagcttgggagaaactcgggaaaagattggtccgaatccaacagcattggtccgctcccattagcaaggcagaatgtgagtgtcattagttggtatttggtagtttgtaaatatgttgtgcatattccttgttgtcatcagtcttttggcaacaagtcctttttgtgcattatcatgagcttcttaacttcagctaactagatgctgttgtatgtcgaaactcatggcattaaagtagagctcatgttacaaatctggcgtggctgtctcaatgggttcaagctttcctggtagctcatcgatcagcatgcaccataggtacattgtcatcaacacatcattggatc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0821900, RefSeq:Os03g0821900