Os03g0822100

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Revision as of 13:07, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0822100| Description = Similar to Transposase (Fragment)| Version = NM_001058267.1 GI:115456262 GeneID:4334607| Length = 4190 bp| Definiti...")
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Gene Name

Os03g0822100

Description

Similar to Transposase (Fragment)

Version

NM_001058267.1 GI:115456262 GeneID:4334607

Length

4190 bp

Definition

Oryza sativa Japonica Group Os03g0822100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:35372481..35376670

Sequence Coding Region

35372885..35373039,35373493..35375176

Expression

GEO Profiles:Os03g0822100

Genome Context

<gbrowseImage1> name=NC_008396:35372481..35376670 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:35372481..35376670 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggcaccggcgggcggcggctacctgcttggtggccaaccggcgaggtgctccggaggacactccaccggcagcaacggcgagggtttcggaggacacccggccacatcgccaccttcttccagctgggtttctctaactcgtgagcacaatgaggaaatgcggacacccaacgcattttttggacttggcactaacagtggtgaagatattgagatgggtgatggtgatagtgactctgaacaagttggtcctgtagatgagcatgtgaatccagtaatacaagctttaacaaggaaattcagatctgaggcttggaaagagtttgtgccgatactcattgataatgaagttggtgcaggaaaatgtaagcactgtgatacagagatccgtgcaaagcgtggagcgggaacaagttcattgaggaagcatttgacaagatgcaagaagcgaattagtgctcttaagattgtgggaaatcttgactctacacttatgtctcctaatagtgtaaggttaaagaattggagctttgatcctgaagtttctagaaaagagctcatgcgaatgattgtattacatgagttgcccttccagtttgtggagtatgatggatttagaagttttgctgctagtcttaacccctacttcaagattatttcgagaacaactataaggaatgattgcatcgctgcttttaaagagcaaaagttagcaatgaaggacatgttcaagggtgcaaattgtaggttctcattgactgcagatatgtggacttcgaaccaaacaatgggatacatgtgtgtgacatgtcatttcattgacacagattggagagtacagaagaggattataaagttctttggagtaaagacacctcatactggagtgcagatgttcaatgctatgctcagctgcattcaagattggaatatcgcagacaaaatattcagtgttactttggattatgcttcagccaatgattcaatggctaagttgttaaagtgcaatttgaaagctaagaaaactataccagcaggagggaagctacttcacaaccgatgtgcaacacatgtcatcaatctcatagccaaagatgggttgaaggttattgattctattgtttgcaacatccgtgaaagtgtgaagtacagggataattccctatctcgcaaagaaaagtttgaggagatcattgcccaagaagggatcacatgcgagttgcatcccactgtggatgtatgtactcgttggaactccacatatctaatgctcaatgcagccttccctttcatgagggcttatgcttcattggctgttcaagacaaaaattacaaatatgcaccctctcctgatcagtgggaaagatcaaccatagtctctggaattttgaaggtgctttatgatgcaactatggtggtgtctggatctttatatccaacatcaaacctttatttccatgagatgtggaaaatcaaattggtcttggacaaggaacactctaacaatgacactgaagtggcaagtatggttcaaaagatgaaggacaaatttgacaagtattggcttaagtcttacaaatatctgtgcattcctgtcatttttgacccaagattcaaattcaattttgtggaatttcggcttgggcaagcctttggtgaaaatgctaaagagaggattgacaaagttaagaagagaatgaacatgttgtttaaggagtactctgataaactcaaggatagcaatgctaacccactgcgccaagctgaacatgtgatggctatctctgaaaatgatcctatggctgattgggttcaacacatctctgaacaatga</cdnaseq>

Protein Sequence

<aaseq>MEAPAGGGYLLGGQPARCSGGHSTGSNGEGFGGHPATSPPSSSW VSLTREHNEEMRTPNAFFGLGTNSGEDIEMGDGDSDSEQVGPVDEHVNPVIQALTRKF RSEAWKEFVPILIDNEVGAGKCKHCDTEIRAKRGAGTSSLRKHLTRCKKRISALKIVG NLDSTLMSPNSVRLKNWSFDPEVSRKELMRMIVLHELPFQFVEYDGFRSFAASLNPYF KIISRTTIRNDCIAAFKEQKLAMKDMFKGANCRFSLTADMWTSNQTMGYMCVTCHFID TDWRVQKRIIKFFGVKTPHTGVQMFNAMLSCIQDWNIADKIFSVTLDYASANDSMAKL LKCNLKAKKTIPAGGKLLHNRCATHVINLIAKDGLKVIDSIVCNIRESVKYRDNSLSR KEKFEEIIAQEGITCELHPTVDVCTRWNSTYLMLNAAFPFMRAYASLAVQDKNYKYAP SPDQWERSTIVSGILKVLYDATMVVSGSLYPTSNLYFHEMWKIKLVLDKEHSNNDTEV ASMVQKMKDKFDKYWLKSYKYLCIPVIFDPRFKFNFVEFRLGQAFGENAKERIDKVKK RMNMLFKEYSDKLKDSNANPLRQAEHVMAISENDPMADWVQHISEQ</aaseq>

Gene Sequence

<dnaseqindica>405..559#1013..2696#gggtttttgggtcggccttgttcgagcgctccacttgctcgcgttcaaatggcggcggcggctttagggctcccggcctgcggcggtgcggctccacggcggatcgagccggcggcggtggctcccagcggaggcggcagcggtgtcggcgcagctccaccgcggatcgaggtggcggcggcggcagcttcggcttcgcggtgtgctccaccgcgggttgaggcggcggcggctgggcgtgctccttcagtcctcctcccatctccaactccccccaagactggtactgtggttcacatcatagcaactagcaacggattctttggttcttgattttctttttattttctttggttcttgattctttagttcctcttctatgcagttccttctttcggcggcggatggaggcaccggcgggcggcggctacctgcttggtggccaaccggcgaggtgctccggaggacactccaccggcagcaacggcgagggtttcggaggacacccggccacatcgccaccttcttccagctgggtttctctaactcgtgagcacaagtatgatttcctccatgaaccctgtcttgttcatctgtcttgctcggttttggtttgatttgtatatatagtgtctcattcaggagaaagtttcagtgactgttatagctaggctttcatgccattttgctaggcccagatttgtatgccaggaaaaagtttcattttgctttcatgccattcaggagaaagtttcagttactgctaatttaaagtttcctactgccttgtgtaaaatagatggtcttttactttgtctctatataacctggattttctcaatattcaggatatactgaacgaaacactgaataagtagcatttttgcatgcttctgacaacatgctgttgtgcagatttttacaccaaaatttcctttccatacattatgtgatagaaaattattttagatggcaaatgatacatttgtgttgttcgttgctttgtttcaagtgaggaaatgcggacacccaacgcattttttggacttggcactaacagtggtgaagatattgagatgggtgatggtgatagtgactctgaacaagttggtcctgtagatgagcatgtgaatccagtaatacaagctttaacaaggaaattcagatctgaggcttggaaagagtttgtgccgatactcattgataatgaagttggtgcaggaaaatgtaagcactgtgatacagagatccgtgcaaagcgtggagcgggaacaagttcattgaggaagcatttgacaagatgcaagaagcgaattagtgctcttaagattgtgggaaatcttgactctacacttatgtctcctaatagtgtaaggttaaagaattggagctttgatcctgaagtttctagaaaagagctcatgcgaatgattgtattacatgagttgcccttccagtttgtggagtatgatggatttagaagttttgctgctagtcttaacccctacttcaagattatttcgagaacaactataaggaatgattgcatcgctgcttttaaagagcaaaagttagcaatgaaggacatgttcaagggtgcaaattgtaggttctcattgactgcagatatgtggacttcgaaccaaacaatgggatacatgtgtgtgacatgtcatttcattgacacagattggagagtacagaagaggattataaagttctttggagtaaagacacctcatactggagtgcagatgttcaatgctatgctcagctgcattcaagattggaatatcgcagacaaaatattcagtgttactttggattatgcttcagccaatgattcaatggctaagttgttaaagtgcaatttgaaagctaagaaaactataccagcaggagggaagctacttcacaaccgatgtgcaacacatgtcatcaatctcatagccaaagatgggttgaaggttattgattctattgtttgcaacatccgtgaaagtgtgaagtacagggataattccctatctcgcaaagaaaagtttgaggagatcattgcccaagaagggatcacatgcgagttgcatcccactgtggatgtatgtactcgttggaactccacatatctaatgctcaatgcagccttccctttcatgagggcttatgcttcattggctgttcaagacaaaaattacaaatatgcaccctctcctgatcagtgggaaagatcaaccatagtctctggaattttgaaggtgctttatgatgcaactatggtggtgtctggatctttatatccaacatcaaacctttatttccatgagatgtggaaaatcaaattggtcttggacaaggaacactctaacaatgacactgaagtggcaagtatggttcaaaagatgaaggacaaatttgacaagtattggcttaagtcttacaaatatctgtgcattcctgtcatttttgacccaagattcaaattcaattttgtggaatttcggcttgggcaagcctttggtgaaaatgctaaagagaggattgacaaagttaagaagagaatgaacatgttgtttaaggagtactctgataaactcaaggatagcaatgctaacccactgcgccaagctgaacatgtgatggctatctctgaaaatgatcctatggctgattgggttcaacacatctctgaacaatgaagtgagcaagttgatactgaattggatatctacctcaaagagaatcctattcaggaatttgggaacaaatttgacattctaaattggtggaagaccaatcactcaaagtatccaactctcgcttgcatagcacaggatgtgctagcatggcctgcttcaacagttgcatctgagtccgcattcagcacaggatctagagtgatcagcgatttcagatgtagccttacaatggattcagttgaggcgcttatctgcctccaagattggtttcgagcttctgccggtatacacgactgccctcgttcatttacttctagtatttatcttgctaaaactaatttatttttatgttttgattgctaggtcctaacataaatgtgagctcagtaaatgaaatcaactacagtgataattttgtggttagtaaattgcttgtgctcttcttatcatctgtctatttaattttctgaaagagaaagatgtctatttattcagtatttgcttgattgcttgcaagatctcttccagcttttctctttctatttatccagtattgaacaatgcctatatgggtttgttgtcctacttgctagctttctgtaaaattggaatatgaagtttcaatgtctctatcatgtattcatctttatctatagaacctggacctggaggattccatggatggacaggatggtggaagcttgtgaatgcccaaacaaaggatctggatattgatggttagtaatctatcatgaacttgtattatactatttataatctgagctagttcaactcttgtacaacatatgagaagctctagatgtacaaaaggaataaacctcatttctggtattgcaatgctctgctttctgaaataaaacgatagcctaaaaatagactgtactgcactactgctagataaatgaagaaaattagtaaaatctgcaaaatttgtgtagcacttgttagatgattcttgtattccttaatctctgattgtgaatactattgagtgactgcagattacttctgtttttcaagcatgttttatatgtcaaatactcaaatgcttagaacacctactgcgttgattcctctgtctgtctgcatatgctcatgtctttgattcagttgttgcccataaaacataaatgcaccatttctttttctgagagatattgcaggttattacctttttaaaacaattattgtatattttcttcctgttattataccatgatcattcgatctctccatcatgttaacctgcagaatctggacctgggtgattcaacgaacagtgcaagctagggaatgccaaatgatgcccactttgatcttggaaggctgcattttgtttgatctcaatataatgaaccggatatttgggttgttcaaatcgatttttgtgaatgatatgagtacatgcatgtacttagttttaattgaactgggtgccagtacccagtgattgatgtttgtacttttgaatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0822100, RefSeq:Os03g0822100