Os03g0825300

From RiceWiki
Revision as of 13:07, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0825300| Description = Protein kinase-like domain containing protein| Version = NM_001058289.2 GI:297601921 GeneID:4334630| Length = 4841 b...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0825300

Description

Protein kinase-like domain containing protein

Version

NM_001058289.2 GI:297601921 GeneID:4334630

Length

4841 bp

Definition

Oryza sativa Japonica Group Os03g0825300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:35514108..35518948

Sequence Coding Region

35514325..35514391,35514968..35515194,35515287..35515422,35515965..35516098,35516184..35516289
,35516749..35516834,35516906..35516979,35517449..35517512,35518065..35518181
,35518369..35518611

Expression

GEO Profiles:Os03g0825300

Genome Context

<gbrowseImage1> name=NC_008396:35514108..35518948 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:35514108..35518948 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggagctcgctgctccaagctctccgtgtgctggtggccgccgcacttcaagtcgccgctgcttgagaatggcgccgccgcggacgacggcagcggcgtgccggtgttcgccgagtacagcctcgacgagctacgggtggcgaccgacgggttctctcccgagcgcatcgtgtcggagcacggcgagaaggcgcccaacgtcgtctaccgcggcaccctcttcagcaccggccgcaccgtggccatcaagcgcttcggccgctctgcctggcccgactcccgccagttcttggaggaggcgagggctgtcgggcagctgcggagtgtccggctggccaacctgatcggctgctgctgcgagaatggcgagcggctgctcgtcgcggagttcatgccgcacgagaccttggcaaagcatctcttccactgggagacaaagccattgagctgggcaatgagggtacgagctgcattctatgtggctcaggcattggagtactgcagtagcaaagggagagctctctaccatgatctgcatgcatacagggttctctttgatgtggatggtaaccccagactgtcgtgcttcggtctgatgaagaacagcagggatgggaagagctatagtaccaatttggctttcacgcctcctgagtaccttaagactggcagagtaattccagagagtgtggtgtacagttttggtactatcttgcttgatctcctaagtggaaaacatatcccaccaagccatgcgcttgaccttataagaggaaaaaattacctggtgttgatggactcttgcttagaaggccatgtctccagctctgatgaggttcatgagatgctggagaatgatggatattgtgaggatgaaagagcaacattcgaggtatctttccattcctggactggccaacaagtatctgatagtattcttgtcaagaaacatggagacagtgcttttcaatccaaggattttgcgactgcagttgagtgctactcaaggttcattgacactggtgtaatggtgtctccgactatgctggcacgacgaagtttcgtatacatggtgctcggcaagctgcaagaaggccttgcggatgcaaagaaagcagcagacatatctcctgagtggcctactgcacactaccttcaagggatggcatatctcgccatgggaatggagcctgaagggcatgaagaactcaagcaaggcgccgctttggaagctgaaaggaatgctagatag</cdnaseq>

Protein Sequence

<aaseq>MGARCSKLSVCWWPPHFKSPLLENGAAADDGSGVPVFAEYSLDE LRVATDGFSPERIVSEHGEKAPNVVYRGTLFSTGRTVAIKRFGRSAWPDSRQFLEEAR AVGQLRSVRLANLIGCCCENGERLLVAEFMPHETLAKHLFHWETKPLSWAMRVRAAFY VAQALEYCSSKGRALYHDLHAYRVLFDVDGNPRLSCFGLMKNSRDGKSYSTNLAFTPP EYLKTGRVIPESVVYSFGTILLDLLSGKHIPPSHALDLIRGKNYLVLMDSCLEGHVSS SDEVHEMLENDGYCEDERATFEVSFHSWTGQQVSDSILVKKHGDSAFQSKDFATAVEC YSRFIDTGVMVSPTMLARRSFVYMVLGKLQEGLADAKKAADISPEWPTAHYLQGMAYL AMGMEPEGHEELKQGAALEAERNAR</aaseq>

Gene Sequence

<dnaseqindica>218..284#861..1087#1180..1315#1858..1991#2077..2182#2642..2727#2799..2872#3342..3405#3958..4074#4262..4504#acgccactccacccccctccccctcctcctctctcccacccctcctcgcgtagtagtagtagtagtattagtctattcgagtcctaccagtagctagctaagcagccgagacggtggcggtggaggaggtggtggtggtggtagtagtagtacgccggggagagagagccgttgctgctgctgtgaggtgagggcgagatctaggagggaggcgtccatgggagctcgctgctccaagctctccgtgtgctggtggccgccgcacttcaagtcgccgctgcttggtatggtgctctcgctctcgcattgggttgggtttgggggggggggggagggatttggttgctggtttcggatgtgcgcgtgttgatgatggagtggggttgttgcggtggcgccctgcatttgggcctggttttgctgcgttttttctggggatcttttttttttttttggggggggggggaactcggtttgcgtctctaattctcctgctttggtttgcggtcgtggagctgttgatcctgctggaattcgctgtgaaatgggtctgatccagtgggtggtttttgtgtgaacgctcatcaacgatcccattttttttttcactctctctctcgctctagcaacctgttgctgatttgatgtttttttttgtttgtttttttttgtcggttgggttgacgaattcggttgctcttgcgagtgtttggagttggttgcgtttgattcagtggggtaatctcttggcgtcgagagcattgcgacctcttcgcgagaatccgtggttgattccgacgcgcgcgtcgtgcttttttggtgctgatccgagctatctgtgtggttttgttgacgtgcagagaatggcgccgccgcggacgacggcagcggcgtgccggtgttcgccgagtacagcctcgacgagctacgggtggcgaccgacgggttctctcccgagcgcatcgtgtcggagcacggcgagaaggcgcccaacgtcgtctaccgcggcaccctcttcagcaccggccgcaccgtggccatcaagcgcttcggccgctctgcctggcccgactcccgccagttcttggttcgtgcagctttgctccatctgcatcagtgcttgccttgccttcgccgcttcgattgaatggctccgttcttgcgtgtgtgtgtgtgcaggaggaggcgagggctgtcgggcagctgcggagtgtccggctggccaacctgatcggctgctgctgcgagaatggcgagcggctgctcgtcgcggagttcatgccgcacgagaccttggcaaagcatctcttccactgtatgtgtttggtgctcaccttttttttcttcttgttctatactagctgcagctacatattgggctttggcaaatgttgtttccgatttggtagtacaaatgtaggcatcaaagatgataagattgggccccttatttaaggatggatgtgtttttgtcacctgaatctaatgttgaattgttgctttcagttggagacggttgaagtaattccttcaacaaactctttttgctgtttcttttgtctggtcctacatttgttcttctgggttaactagaaattaatgcatttattcttctataaatgcttgttattagtgttctgtttggagtactacactagtagttggcatcaagatgttttcattatttattgcctttctagaatatatatccaactcaattgcatctaaggttcttagtatgggttatggtaaattggagagcttttgcctcctgttgcatttaacgttttcagtaggagtagacactttgcatttggattatctacattttgcgctcatggtggttatccttggcaggggagacaaagccattgagctgggcaatgagggtacgagctgcattctatgtggctcaggcattggagtactgcagtagcaaagggagagctctctaccatgatctgcatgcatacagggttctctttgatgtggtgagtcagtacctgtgctacttagtaacttcttagcttgggcttccagtaataaggcatgtaatgttttgatgataaatcataggatggtaaccccagactgtcgtgcttcggtctgatgaagaacagcagggatgggaagagctatagtaccaatttggctttcacgcctcctgagtaccttaagactggtatgtgttgtgcatacaagcaagtttttttctgtgagttatgcatttcatgaattttatttgttaatgtttgatcatgaagtaaggacttgtaatatgagcgtaatatgagctaactcttagacacttgttgagtatgtccatgttctttgctagttattttccccagtggggtaaatcattctatgcaaatgttattgctgggtttccattgtttatttttagctattcacaccttgtttatttttagctatggtaccatggttatgaaccacagacattaggcaacaacgtaagctgcacggacttgtttttcatgaagggatagtatttagcattcgacctctctcatagtgaagcaacagaattctgtgttgcaaaatctacctcgttttcttatgactttgtccatcaaagacacagtctctatttctttactaaccactacattttctgcaggcagagtaattccagagagtgtggtgtacagttttggtactatcttgcttgatctcctaagtggaaaacatatcccaccaagccatgtaagttatctatccttcctgcttttctgcttacccaagataagtattcactttgcttggttttgctgtaggcgcttgaccttataagaggaaaaaattacctggtgttgatggactcttgcttagaaggccatgtctccagctctgatggaactgagttgatacgattagcatcccgttgcttgcagtatgaaggtcgtgaccggccaaacctgaaatcggtggtgtctgctcttggaaacctccagaaagatgcttctgtaatgtttctttttcttgctactttctagactagtaacagtattgtgtaatattgaaaaagctgcaggaaaaaaactccacacaatcgtttgataactattttgtcttctgtcaacgtgctacctttgcttttcatttgatattatgttagcataaatggttttttgaagtatgcgccaactcatctttctccttattaatgtgtcgcgcctgccagcttaatatttcttactcgatgtttaattgtctgtgcaggctccttcacatgctttactaggcatacaacatgataaggaaaatacagagcgaatttcgttatctgctatagcgaaagtttatgccagagcagaccttgatgaggttcatgagatgctggagaatgatggatattgtgaggatgaaagagcaacattcgaggtattaactttttgtcagttaagcttatcataatgaaatattcttgttggtaccatagatccttccctaactcattgctgccatttccctaaaaaggaataaactgccggaacttattactacattattgtcatcttggaatatttcaattgtgtagatgaaacaaaatatgttgaaagcccacacattttgtggcataggataggaagaaagtagatggtctatgttgatgcccatgctcttcgaccaatgaaacctaatggttagctcatgttttaagtgccattcttttgagctcgaggctaaacttttaactagtttgaccatgcttatttttattgctctataggtctgaaagtacaatagaacatttatgtatcttttgaagatatattatacatccatcagttgacctgtaatatatcccatacaaaacttaacttctcaccatgttggctggtccaagtttttttaacgtgaaggttttccatgttttcgcactgctcccgttcatatctgacccataccttaaaaatttggtgtatataacaggtatctttccattcctggactggccaacaagtatctgatagtattcttgtcaagaaacatggagacagtgcttttcaatccaaggattttgcgactgcagttgagtgctactcaagggtatgtattagagtatcaaatgttgtccatgaatctaattcactttcctgtatctatactctgttttcgatagcctcgctgcttgtacattaacaattacttttcctcaaattaagattatggttaaaaaaactgtgttcctgattgattttcaggttgctaagctgtgtttttaaacattttgcagttcattgacactggtgtaatggtgtctccgactatgctggcacgacgaagtttcgtatacatggtgctcggcaagctgcaagaaggccttgcggatgcaaagaaagcagcagacatatctcctgagtggcctactgcacactaccttcaagggatggcatatctcgccatgggaatggagcctgaagggcatgaagaactcaagcaaggcgccgctttggaagctgaaaggaatgctagatagagatgaactgtatagccctcaaacatgatgtgatgcctcctctcttctgtacctagatcgcctgcattttgggtgtcctccagtgctttgccaccaatagggctgttttttggtcttccctaacttgtattggtatttccagtggttttacaactcctaggttggctgttatgacacctccaatatattcataagtacaaaaaatgggcaactagcattcaaatagcaaaccgtggatgtgagattgtaaagctttaatgttatttcgtcacaattcatgtatatacacaacttgcagacttttctgaggcgtcaagagttaaagactgttgtgagt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0825300, RefSeq:Os03g0825300