Os03g0826000

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Revision as of 13:07, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0826000| Description = Conserved hypothetical protein| Version = NM_001058296.1 GI:115456320 GeneID:4334637| Length = 4575 bp| Definition ...")
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Gene Name

Os03g0826000

Description

Conserved hypothetical protein

Version

NM_001058296.1 GI:115456320 GeneID:4334637

Length

4575 bp

Definition

Oryza sativa Japonica Group Os03g0826000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:35551573..35556147

Sequence Coding Region

35551811..35552421,35552932..35553121,35553732..35555192,35555296..35555310

Expression

GEO Profiles:Os03g0826000

Genome Context

<gbrowseImage1> name=NC_008396:35551573..35556147 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:35551573..35556147 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaacagatttcacttgagcatcggtacaaggagtgcaggccacgaagaaataacagctgtccaaccaaaacacttgtcgggaaggatcagttgaaggaattggagcacaggagaccatcacctagtgtgattgcaaaactgatgggacttgatgtgttgccacctgcttatgtagcccacaatcagcaccaggaattcaaggatgtattcgaagtgtcagaggaaccacaagaggccgtcacgaaagagagatcacataatttccctaaagggttgccaagcttgaagcgaagtgcattaaagctaagaaagcttatgccatcaaagtctccctacggcgatgaaacatttgataacaatgtagtgaaccaagatggttttgatcgcttgaactcgctagagataaataatcctttgtttgagaagcacccctatgatgtgaattgttccccaaattatcgatatgagaaagatagtacttcaagtactttcaggaagtaccctgttggtttaggtaactcttcacttaaagaaattgttgttctggagctaggcttaggggaagtccaacattcaggtaatgccttttctacaccagaaccctctgatgtcaataagaatttcaggagaaagatgaagcaggctgagttttctactacgaacaggggttcgcaaaatcttttaggcactaaagatattaatgtgcctagaataaaaggagaaagacacttgactagcaatgctgtagattcactgttaaagcgacaagattcatcacttgatcaatataacacagtggatacggataacactggatcatctcagaagtgtgttagcagtgaagttaactccagaaaaagcaacaggtcatcatcaaatagctcaccctggaaaatccgccgcaagtatgaggaaggtgccattggttcaaaaactcttgcagagatgtttgctttatctgattcagagaggttgaagagggattcagactcacatgtgcagattcaagacaataaacttaaccggggcaacaacaatgacaaggaaggatgctttatagtgttgccaaagcatgcacctcgattgcctcctcacagtttgttggacaagaattcttcctgtgaaaggtcccctcacgatatttttttctcaaatacatcaattagtcacaacagtggtcagtttcacttcgattctttctgggataaaccaacacggcagcaaatttcaagtcccacccaagatgacttgaggaatgcttcttgtgcaagatatcacaccttggagcaacatagatcttctttcccttcttatgataataccagaaacaactcatggcatttaactgatgacttttcaacttttgcctgcataaatgagaaagtacttttcacaacagatgaagacttgttgagaaaacctactgaaacagtgcattcttcgtttggatcacgattatctggggaacaaaaggtttcagcatcgcctttccattgcggtgtatatgaagccataactatttctgatcatacttgtgcggcaaagtctcgtagaagcttgaaagaggttgaccgaccaagcccagtgtctattcttgagcctccaactgatgaagacagttgttgttctggatacttaaaaaatgactcgcaagtcatgcctagcatcgataaacaaatatatggctgtgagctccgatatgagcaagaagtatccttgtccagcgacaatgacaatgattcttctgaccagtctcttgaagcatttgaagttgaggaggaaaaggaattctcttatctacttgacatacttataagctccggtgtgatagtcgcggactcacagctcttgttcaagtcatggcaatcttctggttaccttgttggtcctcatgtcttcgacaagcttgaggggaagtacagcaaggttgctacatggccaagaccacaaaggaggcttctgtttgatcttgcgaattctgttctttctgagatcctcgcaccatgcatcgacacgcatccgtgggcaaagttgagtagaaattgctgccctgtttggggccctgaaggacctgttgaggttgtatggcaaacaatggtcaggcagcaggaagagcttgctgtagcacatcctgatgacaagattcttgatccagaatggctggaattcggtgagggcatcaacatggtgggatggcatatagccaggatgttacatggtgatctcttggatgatgtcatactggaattcctctcaggatttgttgcttcatga</cdnaseq>

Protein Sequence

<aaseq>MEQISLEHRYKECRPRRNNSCPTKTLVGKDQLKELEHRRPSPSV IAKLMGLDVLPPAYVAHNQHQEFKDVFEVSEEPQEAVTKERSHNFPKGLPSLKRSALK LRKLMPSKSPYGDETFDNNVVNQDGFDRLNSLEINNPLFEKHPYDVNCSPNYRYEKDS TSSTFRKYPVGLGNSSLKEIVVLELGLGEVQHSGNAFSTPEPSDVNKNFRRKMKQAEF STTNRGSQNLLGTKDINVPRIKGERHLTSNAVDSLLKRQDSSLDQYNTVDTDNTGSSQ KCVSSEVNSRKSNRSSSNSSPWKIRRKYEEGAIGSKTLAEMFALSDSERLKRDSDSHV QIQDNKLNRGNNNDKEGCFIVLPKHAPRLPPHSLLDKNSSCERSPHDIFFSNTSISHN SGQFHFDSFWDKPTRQQISSPTQDDLRNASCARYHTLEQHRSSFPSYDNTRNNSWHLT DDFSTFACINEKVLFTTDEDLLRKPTETVHSSFGSRLSGEQKVSASPFHCGVYEAITI SDHTCAAKSRRSLKEVDRPSPVSILEPPTDEDSCCSGYLKNDSQVMPSIDKQIYGCEL RYEQEVSLSSDNDNDSSDQSLEAFEVEEEKEFSYLLDILISSGVIVADSQLLFKSWQS SGYLVGPHVFDKLEGKYSKVATWPRPQRRLLFDLANSVLSEILAPCIDTHPWAKLSRN CCPVWGPEGPVEVVWQTMVRQQEELAVAHPDDKILDPEWLEFGEGINMVGWHIARMLH GDLLDDVILEFLSGFVAS</aaseq>

Gene Sequence

<dnaseqindica>3727..4337#3027..3216#956..2416#838..852#actactcccctctcctcccctcccgactcgacgaggatcctcccgtccccacgtcggctggcgattttgactcgcccgccgccgcctgcgccgatctccctccgacgactggcggcggcatcttcttccgccgctgcattgagcacccacgcgtgaggcatcctctttctcatctctctttctacacggtcctaaccttttttttccctgtttaaattaacctctgcatctcctctggatctggaagcttttttcttttttcctcctttgccttaacctgtctaggaatagtagcactttgtttcccaaaagatataataatcataataataataatattggggagccccacgttaggtccgtccctggccttttgatgcgtattgcgtagaaagtgcgtttaaatgcaatagttgggtgggtctatgtgtatcttgaggactttgttatggtatgcattatccattatgggatattattattattttgatgatattattattattttttttgttctagtactactgatttaattgaattgctttaggcaagaaatattggcgttgtacttggagatctagtgcgctctatgttcttgggacagtttgttgtgttgtgatttgtgatgttcagttcagcacaagatgctctctgcgagcattcattagttaagggaaaatttatgcgcatttattagttttctctctgtatagaagtatagaacccccataactttataaatgttccatgaatatgtgtaggcagaagttctcttcacctgtgggatgatgtagcaacattttatctcaactgatcctccatacagtaatctccaagatggaacagatttcagtgagttaattctttctctttcattgtattgctcttgcgatgaaatgtcaaaagtaaagattgagaaatatgtatccttttttgtttttaataacttttgtagcttgagcatcggtacaaggagtgcaggccacgaagaaataacagctgtccaaccaaaacacttgtcgggaaggatcagttgaaggaattggagcacaggagaccatcacctagtgtgattgcaaaactgatgggacttgatgtgttgccacctgcttatgtagcccacaatcagcaccaggaattcaaggatgtattcgaagtgtcagaggaaccacaagaggccgtcacgaaagagagatcacataatttccctaaagggttgccaagcttgaagcgaagtgcattaaagctaagaaagcttatgccatcaaagtctccctacggcgatgaaacatttgataacaatgtagtgaaccaagatggttttgatcgcttgaactcgctagagataaataatcctttgtttgagaagcacccctatgatgtgaattgttccccaaattatcgatatgagaaagatagtacttcaagtactttcaggaagtaccctgttggtttaggtaactcttcacttaaagaaattgttgttctggagctaggcttaggggaagtccaacattcaggtaatgccttttctacaccagaaccctctgatgtcaataagaatttcaggagaaagatgaagcaggctgagttttctactacgaacaggggttcgcaaaatcttttaggcactaaagatattaatgtgcctagaataaaaggagaaagacacttgactagcaatgctgtagattcactgttaaagcgacaagattcatcacttgatcaatataacacagtggatacggataacactggatcatctcagaagtgtgttagcagtgaagttaactccagaaaaagcaacaggtcatcatcaaatagctcaccctggaaaatccgccgcaagtatgaggaaggtgccattggttcaaaaactcttgcagagatgtttgctttatctgattcagagaggttgaagagggattcagactcacatgtgcagattcaagacaataaacttaaccggggcaacaacaatgacaaggaaggatgctttatagtgttgccaaagcatgcacctcgattgcctcctcacagtttgttggacaagaattcttcctgtgaaaggtcccctcacgatatttttttctcaaatacatcaattagtcacaacagtggtcagtttcacttcgattctttctgggataaaccaacacggcagcaaatttcaagtcccacccaagatgacttgaggaatgcttcttgtgcaagatatcacaccttggagcaacatagatcttctttcccttcttatgataataccagaaacaactcatggcatttaactgatgacttttcaacttttgcctgcataaatgagaaagtacttttcacaacagatgaagacttgttgagaaaacctactgaaacagtgcattcttcgtttggatcacgattatctggggaacaaaaggtcagtaggcccttacatttcagtaatccaaaacagaaagagagttagttgggggaaatttgcttcaatctggcgtactttcatggtatttttcttatttcaaggatcatgaattttctgaaatgacaagaatgctctactatgaagttattaataaacttaaacatttatttttactctaattttaattttaaaaagggttcaattgctgttcctgtatcatttcttatttccttttttttgtttaacattagatcgcttctttcttatgtttttcaaagcagtaagcacttaagaaagtacactctactgtgaacccagaaacatagacattgctcttttcttaatttttcttctttatcaatagtatggcttctttgtttaagtttttcttgagtgcggacatgtgctattctagtatggtactaagtacttggtttgtgtacatactgcaataccttacttagccttcattttgtccaatataatgatgaactgggagttaaccaattttcatttgttgacatctttggagccttaaaacgtctggtgttgtcatactatatgcataaatttgtggttaccactcacccagtgctccccctttcaggtttcagcatcgcctttccattgcggtgtatatgaagccataactatttctgatcatacttgtgcggcaaagtctcgtagaagcttgaaagaggttgaccgaccaagcccagtgtctattcttgagcctccaactgatgaagacagttgttgttctggatacttaaaaaatgactcgcaagtcatgcctagtaagtgagacagaccagcaccatttggaacaaagaaacattcccttcttcataaaagaattttattgcttcaaaggagaagtctgtactgcgtttatcagctatcctaacaatgttgaagttgatacaaatatttatgaaattaagctaaaccatttctgtagtctatagcacatgactggagcatcattcgtgattaacatactctagaaaggcatttgctatctagtaaatatgactagttaactaactaatgataaatttcttttgtagtatcactgagttaaaagttggaaagttcaaagttcagccctttaatttaactagtttgtaattagcatacactgaaaaggattttagtttaactaatttagtttgtaattaacatactcttaaaaaggaattttctacccagttgaatgttttactagttatgaaatgttcattgcctctgatcaatgaactttcagagcactaaattgattgttgaatcttttatgttggcctcaggcatcgataaacaaatatatggctgtgagctccgatatgagcaagaagtatccttgtccagcgacaatgacaatgattcttctgaccagtctcttgaagcatttgaagttgaggaggaaaaggaattctcttatctacttgacatacttataagctccggtgtgatagtcgcggactcacagctcttgttcaagtcatggcaatcttctggttaccttgttggtcctcatgtcttcgacaagcttgaggggaagtacagcaaggttgctacatggccaagaccacaaaggaggcttctgtttgatcttgcgaattctgttctttctgagatcctcgcaccatgcatcgacacgcatccgtgggcaaagttgagtagaaattgctgccctgtttggggccctgaaggacctgttgaggttgtatggcaaacaatggtcaggcagcaggaagagcttgctgtagcacatcctgatgacaagattcttgatccagaatggctggaattcggtgagggcatcaacatggtgggatggcatatagccaggatgttacatggtgatctcttggatgatgtcatactggaattcctctcaggatttgttgcttcatgaggaaaattaatcaaattagtttgtacttcgtgttattcatcaatactagtaacagtagtcgagtgcaatgacgagccaggattttgcctgaagaaacttgaaccacattgggtggtgtctgtaacagcgtttcaagtgcacatatgttgccttttttctggtccatgatagaggctcagtataacatttcataactctttgaaggccgaagatgtatgcacaacaccataacatgtgt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0826000, RefSeq:Os03g0826000