Os03g0828300

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Revision as of 13:07, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0828300| Description = Similar to (1-4)-beta-mannan endohydrolase-like protein| Version = NM_001186766.1 GI:297722662 GeneID:9266557| Lengt...")
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Gene Name

Os03g0828300

Description

Similar to (1-4)-beta-mannan endohydrolase-like protein

Version

NM_001186766.1 GI:297722662 GeneID:9266557

Length

1818 bp

Definition

Oryza sativa Japonica Group Os03g0828300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:35642758..35644575

Sequence Coding Region

35642824..35643159,35643265..35643498

Expression

GEO Profiles:Os03g0828300

Genome Context

<gbrowseImage1> name=NC_008396:35642758..35644575 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:35642758..35644575 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcgatgacggtgaggccacggccggccgccgccgcgatcatcatcgccgccgtcttcggcgccgccgcggcggcggcgggcggcggcatggtgggcgtggacgggacgcagttcgtggtggagggcggcaggacgatctacttcagcgggttcaacgcgtactggctgatgatgatggcgtccgacccggcgcgccgcgccgccgtcgtcgccgcgttcgcccaggcgtcatcgcgcggcctcaacctcgcccggacctgggccttcagcgacggcggcgaccagccgctgcagtcgtcgccgggcgtctacgacgaggccatgttccaggggctggactttgtgatcgccgaggcgagacgacatggcatataccttctcctctgcctcaccaacaacttcgacgatttcggcggcaagcgtcagtacgtccggtgggcggccgacgccggccacaacctcaccgccggcgacgacttcttcaccagctccgtcgtcaaatcctactacaagaaccacgtcaaggtacgtcacaatcgatatatacatacatcgatatactag</cdnaseq>

Protein Sequence

<aaseq>MAAMTVRPRPAAAAIIIAAVFGAAAAAAGGGMVGVDGTQFVVEG GRTIYFSGFNAYWLMMMASDPARRAAVVAAFAQASSRGLNLARTWAFSDGGDQPLQSS PGVYDEAMFQGLDFVIAEARRHGIYLLLCLTNNFDDFGGKRQYVRWAADAGHNLTAGD DFFTSSVVKSYYKNHVKVRHNRYIHTSIY</aaseq>

Gene Sequence

<dnaseqindica>67..402#508..741#gttgcatatttgcatgaacaagtcacaagtgtagtagaagtgcagggcgcaagctgtgcaacacacatggcggcgatgacggtgaggccacggccggccgccgccgcgatcatcatcgccgccgtcttcggcgccgccgcggcggcggcgggcggcggcatggtgggcgtggacgggacgcagttcgtggtggagggcggcaggacgatctacttcagcgggttcaacgcgtactggctgatgatgatggcgtccgacccggcgcgccgcgccgccgtcgtcgccgcgttcgcccaggcgtcatcgcgcggcctcaacctcgcccggacctgggccttcagcgacggcggcgaccagccgctgcagtcgtcgccgggcgtctacgacgaggccatgttccaggtcaccaccattcgtcgtatatcaatgaccatttgtcacgtggaatggtgaacaaaaactcacagtttttgtttgattttctctggttttcttttttgcttgcaggggctggactttgtgatcgccgaggcgagacgacatggcatataccttctcctctgcctcaccaacaacttcgacgatttcggcggcaagcgtcagtacgtccggtgggcggccgacgccggccacaacctcaccgccggcgacgacttcttcaccagctccgtcgtcaaatcctactacaagaaccacgtcaaggtacgtcacaatcgatatatacatacatcgatatactagatgttaaagagctggagctcgatctctcgtgcaggcggtgctgacgagggtgaacacggtgacgggggtggcgtacaaggatgatccgacgatcttcgcgtgggagctcatgaacgagccgcggtgcgacgccgacccgacgggcggcatggtgcaggcgtgggtggaggagatggcgccgtacgtgaagcgcgtcgacggcggccgccacctggtgacggccgggctggaggggttctacggcgacggcgagcacgagagcaaggagctcaacccgtggggcatctactacggcaccaactacgtggccacgcaccgcgccgccggcgtcgacttcgccaccatccacctctacccggacgtctggctatggggctccaccgccgacgagcaggccgccttcttccgcaactggacgcgctcccacgtccacgacacggcggcgttcctcggcaagccgctgctcgtcaccgagtacggcaagttcctctggaagggcggcggcgccaacaagacgcagaggaactacttcctcgacgtggtgctcgacgccatctacgcctcggcgtcgcgcggcggcccgctcgtcggcggcgcgttctggcagctgctcctcgacgacgacgtcgtcgccggcatggacgacctcagggacgggtacgagatcatactcgccgaggacagccgcgccgcgagcatcatcggcgagcactccgagcagctggccagcctcaacggccaggacgcggaggcgcttcgccgccgccgccggcggccggcgagctcgcaccggaagacgcgtcttggcagcggcggcgacagcgacgcactccgactcccccgaacgctcttgattcgcttcatctctttgtctagatcgatctcttcatttattcaagacaattttgttcttttctagtttgtatatagcttgcatccttctccttaggtatagttgttcgttggcacatcttgcaactgtaacctgtcgaaatcatcaggaacgcttcaggatggctgttctgacgatgtatgttttgtaccatagtttcctgtataaggtgttttgcaacggtt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0828300, RefSeq:Os03g0828300