Os03g0833100

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Revision as of 13:08, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0833100| Description = Similar to Tasselseed2 protein (Fragment)| Version = NM_001058341.1 GI:115456410 GeneID:4334683| Length = 1150 bp| ...")
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Gene Name

Os03g0833100

Description

Similar to Tasselseed2 protein (Fragment)

Version

NM_001058341.1 GI:115456410 GeneID:4334683

Length

1150 bp

Definition

Oryza sativa Japonica Group Os03g0833100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:35853678..35854827

Sequence Coding Region

35853705..35853718,35853832..35854615

Expression

GEO Profiles:Os03g0833100

Genome Context

<gbrowseImage1> name=NC_008396:35853678..35854827 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:35853678..35854827 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgaagacaaggatggacggcaaggtggccatcgtgaccggcggcgcgagcggcatcggcgaggcggcggcgcggctgttcgcgtcgtgcggcgcgacggtggtcatcgccgacgtccaggacgagctgggcgaggcggtggcggcgtcggtggcggggggcgggtgccggtacgtgcggtgcgacgtgacggacgaggcgcaggtggaggcggcggtggccgccgcggtggcggagcacgggcggctcgacgtgatggtgagcaacgccggcgtgctgctcccgacggggcccgtcgtggacatggacctcgcggctctggaccgggtgatgtcggtgaacttccgcggcgcggcggcgtgcgtgaagcacgcggcgcgcgccatggtgtcgcgcggcacccgcggcgccatcgtgtgcacggcgagcgtggcgtcgtgccagggcgggttcgggccggcggcgtacacggcgtcgaagcacgcggtgctggggctggtgcgcgcggcggccggcgagctcgggcggcacggcgtgcgcgtgaactgcgtgtcccccggcggcgtggcgacgccgctgagctgcgggctgacggggatgagccccgaggagatggaggcggcggcggagccccacaacgtgctccgcgggaaggtgctcaaggcggcggacgtcgcggaggccatgctcttcctcgcctccgaccaggccgccttcgtcagcggccacaacctcgtcgtcgacggcgccaccaccgccgtcaactacgccgtgctccagtccgtcggcctgtga</cdnaseq>

Protein Sequence

<aaseq>MSKTRMDGKVAIVTGGASGIGEAAARLFASCGATVVIADVQDEL GEAVAASVAGGGCRYVRCDVTDEAQVEAAVAAAVAEHGRLDVMVSNAGVLLPTGPVVD MDLAALDRVMSVNFRGAAACVKHAARAMVSRGTRGAIVCTASVASCQGGFGPAAYTAS KHAVLGLVRAAAGELGRHGVRVNCVSPGGVATPLSCGLTGMSPEEMEAAAEPHNVLRG KVLKAADVAEAMLFLASDQAAFVSGHNLVVDGATTAVNYAVLQSVGL</aaseq>

Gene Sequence

<dnaseqindica>28..41#155..938#gacacgaaacagcttttgcattgcatcatgtcgaagacaaggtgagtcactcgcagctactagtagtttttttcgtttgatttttttttagatttgaggatgttggattggtttgggtcgaattcgtttgatggatttgagcgggggcgtgcaggatggacggcaaggtggccatcgtgaccggcggcgcgagcggcatcggcgaggcggcggcgcggctgttcgcgtcgtgcggcgcgacggtggtcatcgccgacgtccaggacgagctgggcgaggcggtggcggcgtcggtggcggggggcgggtgccggtacgtgcggtgcgacgtgacggacgaggcgcaggtggaggcggcggtggccgccgcggtggcggagcacgggcggctcgacgtgatggtgagcaacgccggcgtgctgctcccgacggggcccgtcgtggacatggacctcgcggctctggaccgggtgatgtcggtgaacttccgcggcgcggcggcgtgcgtgaagcacgcggcgcgcgccatggtgtcgcgcggcacccgcggcgccatcgtgtgcacggcgagcgtggcgtcgtgccagggcgggttcgggccggcggcgtacacggcgtcgaagcacgcggtgctggggctggtgcgcgcggcggccggcgagctcgggcggcacggcgtgcgcgtgaactgcgtgtcccccggcggcgtggcgacgccgctgagctgcgggctgacggggatgagccccgaggagatggaggcggcggcggagccccacaacgtgctccgcgggaaggtgctcaaggcggcggacgtcgcggaggccatgctcttcctcgcctccgaccaggccgccttcgtcagcggccacaacctcgtcgtcgacggcgccaccaccgccgtcaactacgccgtgctccagtccgtcggcctgtgacacggaccgacgccattaatttaatttaaaagaaaaacatatctttacgataaattttaccgcgttttgactggaaagatgatccctttttcttattaggcgatcaatggtgacgtggtgtcatagcatgtggtttgtaaaattgtgtttgttcgtttgtaatattatatgttggttgccattgcatctcatcatgatgcaaccttttggac</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0833100, RefSeq:Os03g0833100