Os03g0836000

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Revision as of 13:08, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0836000| Description = Similar to Actin 7 (Actin 2)| Version = NM_001058357.1 GI:115456442 GeneID:4334702| Length = 3687 bp| Definition = ...")
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Gene Name

Os03g0836000

Description

Similar to Actin 7 (Actin 2)

Version

NM_001058357.1 GI:115456442 GeneID:4334702

Length

3687 bp

Definition

Oryza sativa Japonica Group Os03g0836000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:35976361..35980047

Sequence Coding Region

35976706..35976771,35977181..35977793,35977887..35978281,35978371..35978430

Expression

GEO Profiles:Os03g0836000

Genome Context

<gbrowseImage1> name=NC_008396:35976361..35980047 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:35976361..35980047 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgacggtgaggatatccagccacttgtatgtgacaatggcactggaatggtcaaggctggttttgctggtgatgatgcccccagagcagtgttccctagtatagttggtcgccctcggcacactggtgtcatggttggaatgggccaaaaagatgcctatgtgggtgatgaggcacaatcaaaaagaggtatcttgaccttgaaataccctattgagcatggtattgtgaacaactgggacgacatggagaaaatctggcatcacaccttctacaatgagctgcgtgttgctcctgaggaacatccaattttgctgacagaagctcctctgaacccaaaggctaacagagagaaaatgacccaaatcatgtttgagacattcaatgcaccagcaatgtatgtggctattcaagctgttctttcactatatgccagtggtcgtacaacaggtattgtgcttgattctggtgatggtgtgactcacacagtgccaatctatgaaggatatgcacttcctcatgctattcttcggttggatcttgctggtcgtgatctgactgactgcctaatgaagatccttacagaaagaggttattcctttacaacaactgcagagcgggaaattgtgagagacataaaagagaagcttgcatatattgctcttgattatgagcaggagctggagactgccaagagcagctcctctgttgagaagagctatgagttgccagatggacaagtcatcacaattggcgcagagaggttcaggtgcccagaagtgctgttccagccctcgctgattgggatggaagctccggggatccatgagaccacctacaactctatcatgaagtgtgatgtagatatcaggaaggatctctatggtaacattgtgcttagtggaggaactaccatgttccctggcattgctgacaggatgagcaaggagattactgcccttgcaccaagcagcatgaagatcaaggtcgtggcacctcctgagagaaaatacagtgtctggattggaggttctatccttgcctccctcagcacattccaacagatgtggatatctaagggagagtatgatgaatccggcccttcaatcgtccacaggaaatgcttctaa</cdnaseq>

Protein Sequence

<aaseq>MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG VMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEE HPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDG VTHTVPIYEGYALPHAILRLDLAGRDLTDCLMKILTERGYSFTTTAEREIVRDIKEKL AYIALDYEQELETAKSSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSLIGMEAPGI HETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAP PERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF</aaseq>

Gene Sequence

<dnaseqindica>3277..3342#2255..2867#1767..2161#1618..1677#ctgacttcgcccgccgactccgccgccgccgccgatccccatccatcccgcgagcagagcaggaggagcgcgagcgcgagcgccgccgttcatccgcccttctgcttccgccgcgtcgcatcccggtgagcatcccatcctcttcctcattctctctctctacccacgcatcttctccaattttgcgttagccccttgtttctcttctagacatggaaagtttttctcttaattttgcttaatctaactaatagcagtttttttgttcgccaaaaaagtttttgggttgaactgaaacccccatgtcccattagatccgcccctgcgatatcgtctttgtgcggatctgccatttcgtcagtgttcttagcttttttggttgatctactgaacctcagatcggggatgagacactggttgtgaacactaccaatacgaatttgcggttttttaagctattttcagttaaacttctcttcttcagctttgcttatgttggttggatcgggggatcggccatgcaatatgtggaaggaaactggggaggtcccttcgttccaacttgcaagggtatccgtttggatcattgcgtccatagaaacagaattggatttggatcatctgtttggaggaaaagatctaactaggatttagtacagatttaaaacaaatcgcagccgaatcaatccattggaacattcatgatcatgaatgttagttcaagtgtgtcttcttcttctgtacatgttatgaaaatgaaaaaaaaaacgtaaatgggacttttccgttctgcatagagtctgtagtagtaaatgtttatttttatggtgtgctggtttgcatcgggcaggatggtttgtgttttactgcagagcttttcttttttcgttactgcaagaatctatgtgctatttgttagtcacaatatcttgtcagttatagcacaacctatatattgcatattacttcctaactactaagtttgtacatacaaaatgtcatgttcaggatttcgtgttgccactaggaactagaacgtgaatgccactacttgctggcacttcaactttaaacctccacatttgtatgtttgctggacagatcttgatatctaactactaggctggatgttcagaaactgcaataattgtgatctagtactgttgtggttttattcaactttggtaggcacactggcacagttgcacatgggtaagcatgtccctgcctgacaggacagcttattttctctttagtttcttgagtataaagggaccattaataccatttaagtgttatatgctttcatcttcaaacctgttattagtcattttgtaatgaaaatacatactatgactaaagctagactagaggagtagagctgagttgtgctaaatgcctaaatacaacagtgactttcatatatttgcttatgataaaactgtcttagtttttattggatagctgaatttatgtaaaacattgtaagctgttctttgtttttgtgctcatcaatcatagttctggcctgcaactagtctagcaagaaatatggtaaaaatttattctgtaacaagtaaatgatggagatggcttatgatttccttgttcagattaatggccgacggtgaggatatccagccacttgtatgtgacaatggcactggaatggtcaaggtttgattcttataccattgtccattcgttttttttaattcatggaatgagttgttcaaaaataataataactctcactctctctctaggctggttttgctggtgatgatgcccccagagcagtgttccctagtatagttggtcgccctcggcacactggtgtcatggttggaatgggccaaaaagatgcctatgtgggtgatgaggcacaatcaaaaagaggtatcttgaccttgaaataccctattgagcatggtattgtgaacaactgggacgacatggagaaaatctggcatcacaccttctacaatgagctgcgtgttgctcctgaggaacatccaattttgctgacagaagctcctctgaacccaaaggctaacagagagaaaatgacccaaatcatgtttgagacattcaatgcaccagcaatgtatgtggctattcaagctgttctttcactatatgccagtggtcgtacaacaggcatgtgtccattttctactattcaaaatgagtctttgtacacttacatctcttcattggtgatatgaccccagtgcgttgtggcttgtgcaggtattgtgcttgattctggtgatggtgtgactcacacagtgccaatctatgaaggatatgcacttcctcatgctattcttcggttggatcttgctggtcgtgatctgactgactgcctaatgaagatccttacagaaagaggttattcctttacaacaactgcagagcgggaaattgtgagagacataaaagagaagcttgcatatattgctcttgattatgagcaggagctggagactgccaagagcagctcctctgttgagaagagctatgagttgccagatggacaagtcatcacaattggcgcagagaggttcaggtgcccagaagtgctgttccagccctcgctgattgggatggaagctccggggatccatgagaccacctacaactctatcatgaagtgtgatgtagatatcaggaaggatctctatggtaacattgtgcttagtggaggaactaccatgttccctggcattgctgacaggatgagcaaggagattactgcccttgcaccaagcagcatgaagatcaaggtcgtggcacctcctgagagaaaatacagtgtctggattggaggttctatccttgcctccctcagcacattccaacaggtacttgcatgcattctctttaattctgggggttcatggcatgttggtacttatctgcagcattcatttaattctggggagtcctggcatttgggcacctagcggtcatcctgaggaaatttattttatgttctcctttaacatcttccaactttgaagttttaagtgaacaactatgtagcaaatttcttttgtgattcctggtaaataggaaggcatcttatagtttggttatacacgatgtgatcaacatttatttatattccaaaactatgattagaagaaatgaaagaaaaagaaaaggtagtcatttgctatttgattatgccctaataaactagattacacattaattttgaatgcaaaatgttagataaagacacttatcctgttctttttcctgtcgcagatgtggatatctaagggagagtatgatgaatccggcccttcaatcgtccacaggaaatgcttctaatccgagccttgctctgagtattttcggtgtgcctctctgttgtctgtactgtcagtcttgtgagctttgcatggttgggcgtgtgtcggtactttcgtcgtcagtatattttcaagtttctgagagcgtttttttgcatatatgctagtactactggatgaagaaaaggtagatccaagctcgtttgtttgagatatatcctgctttagtgatttcagatgccgtgtgttctagtgatatgttgatattagtgagtgagaattgtatcggtttggccgcctcggccgttctgtgactgcggaacattagctatgtatgtatatttgcctaagtattggctatatt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0836000, RefSeq:Os03g0836000