Os03g0836900

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Revision as of 13:08, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0836900| Description = Similar to IAA-amino acid hydrolase 1 (EC 3.5.1.-)| Version = NM_001058363.1 GI:115456454 GeneID:4334708| Length = 3...")
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Gene Name

Os03g0836900

Description

Similar to IAA-amino acid hydrolase 1 (EC 3.5.1.-)

Version

NM_001058363.1 GI:115456454 GeneID:4334708

Length

3769 bp

Definition

Oryza sativa Japonica Group Os03g0836900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:36015439..36019207

Sequence Coding Region

36015439..36015714,36016788..36016913,36017254..36017565,36018552..36018680,36018806..36019207

Expression

GEO Profiles:Os03g0836900

Genome Context

<gbrowseImage1> name=NC_008396:36015439..36019207 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:36015439..36019207 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgacgacgctggggcgcgagctcctggaggcggcgagggcgccggagtttgcggggtggctgcgcggcctgcgccgccgcatccaccagcacccggagctcgcgttccaggagcaccgcaccagcgcgctcgtgcgcgcggagctggacgcgctcggcgtcgcgtacgtgtggcccatcgcgcaaaccggcgtcgtcgccaccgtcgccggcgctgccggccctggccccgtgttcgcgctccgcgccgacatggacgcgctccccatccaggaaatggtagaatgggaattcaagagcttggaagatggaaagatgcatgcgtgtgggcacgatgctcatgtcgcaatgctgctggtagctgctaagctgctgcaatcacgcagggatcatttcaatgggaaggtgaagcttgtgttccaaccggcggaggggggcgccggcgggtaccatgtgctcaaggaaggcgttctggacgacacgcagaccatcttcgccgtgcacgtcgccacggatttgccggcgggcgtagtgggctccaggccaggtccgttcctcgccggctcggctcgcttcacggcgaccatcaccggtaaaggcggccacgcggcggagccccacctcgccgttgatcccatcgtggctgcctcttccgccgtcctcagcctccagcagattgttgctcgcgagaccaatccactccaaggcgcggtggtgtctgtgaccaccatcaaaggaggtgaagctttcaatgtcattccggaatctgtcactctgggcggcaccttgaggagcatgacaaccgatggcttgtcttacctcatgaacagaatcagagaggtgatagaggggcaagcagccgtgaaccggtgcacggcggcggtcgacttcatggaggataagctccggccatacccggcgacggtgaacgacgaggggatgtacgcgcacgccaaggcggtggcggagagcatgctcggggaggccaacgtgacggtgtccccaatgtgcatgggggcggaggatttcgggttctatgcgcagaggatcccggcggccttcttcggcataggggtcggcagcaacggcaacgatggcggcgggatggcggagacgacaaagaatcagctgcactcgccgcactttgtcgtcgacgaggaagcgctccccgtcggagccgccttccacgccgccgtcgccatcgagtacctcaacaagaacgcctctggccgttcagcctga</cdnaseq>

Protein Sequence

<aaseq>MSTTLGRELLEAARAPEFAGWLRGLRRRIHQHPELAFQEHRTSA LVRAELDALGVAYVWPIAQTGVVATVAGAAGPGPVFALRADMDALPIQEMVEWEFKSL EDGKMHACGHDAHVAMLLVAAKLLQSRRDHFNGKVKLVFQPAEGGAGGYHVLKEGVLD DTQTIFAVHVATDLPAGVVGSRPGPFLAGSARFTATITGKGGHAAEPHLAVDPIVAAS SAVLSLQQIVARETNPLQGAVVSVTTIKGGEAFNVIPESVTLGGTLRSMTTDGLSYLM NRIREVIEGQAAVNRCTAAVDFMEDKLRPYPATVNDEGMYAHAKAVAESMLGEANVTV SPMCMGAEDFGFYAQRIPAAFFGIGVGSNGNDGGGMAETTKNQLHSPHFVVDEEALPV GAAFHAAVAIEYLNKNASGRSA</aaseq>

Gene Sequence

<dnaseqindica>1..276#1350..1475#1816..2127#3114..3242#3368..3769#atgtcgacgacgctggggcgcgagctcctggaggcggcgagggcgccggagtttgcggggtggctgcgcggcctgcgccgccgcatccaccagcacccggagctcgcgttccaggagcaccgcaccagcgcgctcgtgcgcgcggagctggacgcgctcggcgtcgcgtacgtgtggcccatcgcgcaaaccggcgtcgtcgccaccgtcgccggcgctgccggccctggccccgtgttcgcgctccgcgccgacatggacgcgctccccatccaggtcaattaatgcgctagctctagcaccattatatcttatgtaaatcgtacctctaaattgttttattaaggttcaagaagaaagaatatgatacctcttactaaatggtgtataggtaatagtagaaggtactaaatggtgtataggtaatagtagaaggatacttgatggtaaaatatagagaaatttaaatgatactccctccgtttcacaatgtaagactttctagtattgcccacatatatatagatgttaatgaatacaaacacatacatatgtctagaatcattagcatctaaatgaatgtgggcaatgctagaaagtcttacattgtgaaacggaggaagtaggtgattagtgtgagtattactattcttttgtgacaattattttaggataaatttaaatattaaaaatacaattattatatatgggatatatatagtattattatactacactgtacgagagctaccacattattcgaagatcatagtggaccaaattataacgatgtaatttaattgcaatagttgtacatatatacaatcatgtactccatccgtcccaaaataagtgcagccatggttttccgcactcaactttgacaactcgtcttatttaaaaaaaatttaaaaaaaaaataaaaacataattcatgagtaaagtagtattcatgttttatcatcttataactacaaaattgctaattataaaaaaaatcaaataagacggatgatcaaagttaggcgctgaaactcatggctgcacttattttgggacggaggtagtatatagaaaaagaagataatatttgtatattaaatttaatcatactttaatgcatattattattattattattattattattattatttaacaaatgtaattaaatttattagttctcaatcaatcaatagaaaattagccacgctggtctcacccggcctttttttattatttttttcgtgataccaacctatttttttaaaaaaaaaatcgtgatgttgctaggctagctagctacctgtgaattatgatggctaagtttattggcatttaattggcaggaaatggtagaatgggaattcaagagcttggaagatggaaagatgcatgcgtgtgggcacgatgctcatgtcgcaatgctgctggtagctgctaagctgctgcaatcacgcagggatcatttcaatgtacatacatacaacaccacctagttttttttaatttaaaaaagaccaatgtataatactccctccgcttcattttaagcgctccatcttatttggaattttgtatgattagtatttttattattgttgttagataataaaatatgaataggaactttatacatgactaatgtttttaatttttttttaaaaaattaaataaaacgaataatttaagttgaacaccatgactgcgcttaattgggacagaggaagtagtactagtttaatttcaaaatgcaagctgatcactatggagattagagaaataaaaacagtcctgtcactacaaaataattaggggaaggtgaagcttgtgttccaaccggcggaggggggcgccggcgggtaccatgtgctcaaggaaggcgttctggacgacacgcagaccatcttcgccgtgcacgtcgccacggatttgccggcgggcgtagtgggctccaggccaggtccgttcctcgccggctcggctcgcttcacggcgaccatcaccggtaaaggcggccacgcggcggagccccacctcgccgttgatcccatcgtggctgcctcttccgccgtcctcagcctccagcagattgttgctcgcgagaccaatccactccaaggcgcggtatgtgcggtacattaattcattaattaactcgctcttctatactacagtgttataaccctcccctatactttccacttctacattgttacttcaacccattaaactctataaattaacatgcaaatgtgatacactatcattcattaacaattatcacatcttaaaactcgtacaaatacatcacatcatctactccctccatctaatataagctcacataatattagatgttgtactatgaaatatcatatttgatcctaatgtatttatattagaatggagagagtacaatttattactccctccgttccaaaatatagctatttttagctatgaatctggacacacatgtatccagatgtgtgtctagattcatagctaaaaatagctatattttaggacagaggtagtatatattagagcttaacatatgctagcatgatacgtgaatcattctttcgatgtcattttcataatgtttcaacatatatcaatagatcattttcataacatttaatgtacatatttcacgggaaagcacgaacaccatctagtaaaaaaagaaatcatcaagttagttgcgtgcagtgtgttcaactgtatcccgttatttatttatactaaaataaggctgtgtttgagggagaggagattgagagaattgggaagatacgcaaaacgagatgagccattagcgcatgattaattaagtattaactattttaaattttaaaaatggactaatatgattttttaaaacaatttcatatagaatttttttttgcaaaaaatacatcgtttagtagtttggaaagcgtgcgcgcggaaaacgagtgacaatctacccaatctctccccaatctcttttgaaagaacgcaggctaagtgtgtttcacgtgtctgaacaatgcatgtaatgcaataattaatgatgaacaattaacaaacagtgatgcacatgcattgttgggtcttgcatgcaggtggtgtctgtgaccaccatcaaaggaggtgaagctttcaatgtcattccggaatctgtcactctgggcggcaccttgaggagcatgacaaccgatggcttgtcttacctcatgaacagaatcagagaggtagtaaaattgtgctgataatcagagaagtactagtacatgcatataatgtcttttttagtttttttttcttcttggggaaaacagaaattttttgttgaacttacatactggaatatatgaaggtgatagaggggcaagcagccgtgaaccggtgcacggcggcggtcgacttcatggaggataagctccggccatacccggcgacggtgaacgacgaggggatgtacgcgcacgccaaggcggtggcggagagcatgctcggggaggccaacgtgacggtgtccccaatgtgcatgggggcggaggatttcgggttctatgcgcagaggatcccggcggccttcttcggcataggggtcggcagcaacggcaacgatggcggcgggatggcggagacgacaaagaatcagctgcactcgccgcactttgtcgtcgacgaggaagcgctccccgtcggagccgccttccacgccgccgtcgccatcgagtacctcaacaagaacgcctctggccgttcagcctga</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0836900, RefSeq:Os03g0836900