Os03g0840900

From RiceWiki
Revision as of 13:09, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0840900| Description = Protein of unknown function DUF543 family protein| Version = NM_001058385.2 GI:297601963 GeneID:4334733| Length = 31...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0840900

Description

Protein of unknown function DUF543 family protein

Version

NM_001058385.2 GI:297601963 GeneID:4334733

Length

3177 bp

Definition

Oryza sativa Japonica Group Os03g0840900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:36206478..36209654

Sequence Coding Region

36206827..36206841,36207696..36207841,36209373..36209592

Expression

GEO Profiles:Os03g0840900

Genome Context

<gbrowseImage1> name=NC_008396:36206478..36209654 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:36206478..36209654 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggagtcgcccgagaacgccgccccggccgcggctccggccccagcgcccgcgcccaccccggccccgccgccgccgccgtcatctccgcccaccaagtcggggatcccgccgcggtacgacctggacgccaagtgggacgcctgcctcgacatctccatccgccgcgtcgcctactccaccctgggtggcaccttcgcgggcctcctcctcttccgtagcccaactactcgctgggcatcagttgcgctcggagctggtgtggggataggagctgcgtacactgaatgttcatacttattcaatggtgctcctccaaagtggtcacccaaagtttcgaccgttccttctgctcattctgaaggggaagacaagtaa</cdnaseq>

Protein Sequence

<aaseq>MAESPENAAPAAAPAPAPAPTPAPPPPPSSPPTKSGIPPRYDLD AKWDACLDISIRRVAYSTLGGTFAGLLLFRSPTTRWASVALGAGVGIGAAYTECSYLF NGAPPKWSPKVSTVPSAHSEGEDK</aaseq>

Gene Sequence

<dnaseqindica>2814..2828#1814..1959#63..282#gttcgcgtctcctctccttcctcccccacctccgtctcgcgaaaccctcctcccctccccccatggcggagtcgcccgagaacgccgccccggccgcggctccggccccagcgcccgcgcccaccccggccccgccgccgccgccgtcatctccgcccaccaagtcggggatcccgccgcggtacgacctggacgccaagtgggacgcctgcctcgacatctccatccgccgcgtcgcctactccaccctgggtggcaccttcgcgggcctcctcctcttccgtaaggagtttcccccctcccaaactcgcccttgccttcccattgcgtgcgatttcgtgagatctggttgcggcgcgctcgttgttccggcattggcctagggttggcgccgttgctctcgttttaccgttccgatcggcctactctgatgagggattggctaattagggttacatccaagtataatgcacgttatgtaggaactggttgctttatattccgagtaattttttttcatgcaatatcatgtgattaggtgtcgcatttagcgtggatgagttttttgtgtgccacaatgattctgggatttgacatgtgcagatgaaaattccttggtcttagtttactgtatgacattgagagcgaaataagtacaaacaagcagaatgtgaggatgcctgaatcacgtatcgatatccttgtttcattgtgggggctatgcctggattgcttgtaaggctttggtgaacatttattacaacattgtgtttctttcgtatgggcagcttccatgtgtggtagcttgtttacgagaagtttttgttaaatggtattggttttcagcacgtcacggtttagatcccttctaattcatgtttagccattgatagtattagttctcatactgcctagaatatgtttgaaatgtgatcagtggtgaactggtggtcctccttagggggatcaatcgtagtaacttttgtgtgccaagtgctgaggttttgtatgatttgtggtctggtactaatccttaatcttggagtgttgactgtgctttatgtgatcaacacttagcattttagcttgatgtctctccagttattttttcctaatggtgatgagcacacattatagcatgcatgtttaggatcttttcctaggtgaacctcaaatgctcaatctcaaatatgaagggcttcacatgatatctattctgaagtcattattagttattaagttttcctgtatcttttttttttaattttttcttgcattcagcacggatttgacatccagatactctttaaacaatggaacacgtttgctgagatctccttttacatcttgagtactttagctatgacaatttaccatcttgacaatacaactaacaatacgttctctttgaaccttcttgaattactattcatcatattttatcctgaatttgttagaaatggcatatgtccaaaaaaaatgcaaagggagtagttctgccttaaaataccagtgaatagacattcattaaagtactaataaatttagttcttttctccaacaagagttggatgaagattaagattttcgtggcacgctttttaaactgttaaacggtgtgtttcgtgcgaaaactttctatatgaaagttgctctaaaatatcatattaatctatttttcaagtttgtaataattaaagctcaatcaatcatatgttaataccacctcgttttgcgtaaaaaacttcatctccatcttcattttcaggagaaaagaacaccaccatattttgaccagtattattttatacaggtagcccaactactcgctgggcatcagttgcgctcggagctggtgtggggataggagctgcgtacactgaatgttcatacttattcaatggtgctcctccaaagtggtcacccaaagtttcgaccgttccttctgctcattctgaagtaagtgttttctcattttccctgaacttatatatatctgtttgttgactagtcaaactttaccatcagtaaatcaactgcatccttttactgttcttttttagcttttacttgacctcaccatatttttatcctggttgtatgtggtacagttatcaactcttggtgtttctggaaaagaaatgtacttaatattagaccagaataggttattggtgaaatttatttgccactttaactttataacacatagcaggcactacatgtttgctactgcttgttgcatatttatgaatgcatgggttgagcttcttactatcagcgattgtccaaaggctaggaattaggtacatgctgacagtgatcaaacaaaaaatagagcacacgtttcatgtggttggtagtaatttaccaacttccaaacacgtttaggccactccttgtgtttccatagcaagccccccttttctatatctgggattttttcttaattcagcatttgtcaaaatttgtatagatgatctcatggcagtcatgttttggtcagtttgggattagattgtttttgaaaacactctcaggtgtgtggaaggatagagttatcgtttgttgaagccactgattttcaacagtccatgggaaaaatgttgtgttggtgtccttttgggtgaagtgaaagtattgaaaaccctctgcagaagttataatggctgtcatgaatctagtacttacaggatgcgtgtagcaagttttgttcattgtgaaatgacattggtgattatcttttaacgtatctaattcaaaattatcattttgaatgttcattaatttccttatcttctatatttaatcagggggaagacaagtaaacgctgtttggttggatcggtccatcttgatggaggttttttggagtgttgttgaactagctatctcatcatcttgtctgatatcgccaattctggtctactctttaagtatcgcctcaaagttagcaagagcctgctgattttcctttacactatgcaaaactattccaattgtggtcggatgacccatgggccatggctgcgtacctcaaatgatggttttgtgactggcaaataatatgttcatcatgcgaacttgttgcagcgtgcacattagtatatactttgttactgtcccccttttgatgattggtttgtttccaatcctgagcaagtccaatttctgaac</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0840900, RefSeq:Os03g0840900