Os03g0843700

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Revision as of 13:09, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0843700| Description = FAR1 domain containing protein| Version = NM_001058401.1 GI:115456530 GeneID:4334752| Length = 4210 bp| Definition ...")
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Gene Name

Os03g0843700

Description

FAR1 domain containing protein

Version

NM_001058401.1 GI:115456530 GeneID:4334752

Length

4210 bp

Definition

Oryza sativa Japonica Group Os03g0843700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:36312909..36317118

Sequence Coding Region

36313087..36315132,36315210..36315320,36315414..36315518,36315623..36315688,36315797..36315829

Expression

GEO Profiles:Os03g0843700

Genome Context

<gbrowseImage1> name=NC_008396:36312909..36317118 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:36312909..36317118 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtggacgcggcggcggcggcggcggagtgcggcgagctggacgggacggacgccatggcctacggcgacgaccggacgccgcgggacgggatggtgttcaagtcgtacgaggaggtgctcaacttctacaagcgctacgccctccgcaccgggttcggggtctgcgtcaagaagtcgtccttcaccaaggccggcctctgccgccgcctggtgctcgtctgcaacaagtggggggacgggaaggaggacgcgtgctaccaggcgaggccgacggccaagaccaactgccaggccaccgtcgtcgcgaggctctggagcgatggcctgctgcacctcatggatgtcaatctggagcacaaccacgcgctgaatccctccgcggcgcggttcctgaggtgctacaagacgttgcctagtgggatgagtaaagatctggtggtgagggctgccagaggggaatgctcgacctccggcgacatcgaggtcccgatattcgatgattgggggaggctcaagattggggaagatgatgtagcggccatcaatggctttttcgcggatatgcaggcgaagcaggcgaacttcttctatctcatggatttctacggggaaggccatctgaggagtgttttttgggccgattcgaggtccagggcagcgtaccaatatttcaacgacgctgtttggattgatacaacctgcttaagaaataggtttgatacaccccttgttttgttcctaggggtgaaccatcatggtgagcttgttctgttaggctgtggcttgttttcggatgagagtacggaaagcttcttatggctgctgaagtcgtggttgacttgtatgaaaggatggcctccgaatgccatagttacggatgattgtgccgcgataaaagccgcagttcgtgaagtatttccaaatgcacgccatcgaataagtgattggcatgtgttaagaagtatctctgaaaagttaggagaatcagcacaatttgaaggaatgaagaccgaattggaaactgtaatatatgattccttgaaggatgacgagtttgaggcaaggtggaataacttgatcagtagatttggccttcaggataatgaatggatcacttttctgtatgaaaatcgccatttctgggtccccgcctttctgaaagataccttctgggctgggttatctactgttaaccaccatgagagtccaaatgccttctttgaagattcaatcaacccagagaccaaattggtgacattccttagcagctatgtgaatcttttacagaacaaatacaaaatggaggaagatgatgatcttgagtcattgagtagaagcagggtgctagtatcgaagtttcctatggaagaacagctatctagactatacacctttaaaatgttcactaaactccagaatgagctgaacgcaaccatgaattgtgaagttcagttggatgattcaacatcctccattgtagttattgatctagctgagtcaagcggagaaatggtgaataaaaaatatgaagtcgttcactgtatggagaccgacaggatggaatgcaactgtggcctgttccagttcagtggcattgtttgtcggcatacattatcggtgcttaaatgtcagcatgtttttgatatacccccctgttatgtgcttaacaggtggcggaatgactttaagcagcttcacgccttagataatccatggaaggatttggtaacaagtaatcatattgagcgctatgattatgtttctttgcagtgcctccgtcttgttgagattggagcatcatcagatgagaagcatcagcatgcattaaaattaataagagacatacgacggacccttcttgatgataatttgtgccgggaattggagcagaaacttacaccatctgaacgtgctattaatggtgacagccacatgcaagctggctcatctgagggagggccagcaaaaaagcgccgtggccgtcctcccaaaaagagtaaagatacaaatgtggagtccgtgtcaaatcaatatgcccataaggattctttactggtatcatcggacgttagtcagaaggatgcttttcattcttcttctactgcctcaaatcttggtactcatgtcaggacaaatggtgttgttgaccttatggaagaagttaatccaaatgagctatcttttgatagccgttatggggtgcagtctagccacccacaccattatggcaatcagctgcatccaagcaacactatgcagtttggccaaactacatcaacagcagagcactctagagtccagtggatgtaccagaatatatttcaggacgatcaagtgccttatggcagacggacatga</cdnaseq>

Protein Sequence

<aaseq>MVDAAAAAAECGELDGTDAMAYGDDRTPRDGMVFKSYEEVLNFY KRYALRTGFGVCVKKSSFTKAGLCRRLVLVCNKWGDGKEDACYQARPTAKTNCQATVV ARLWSDGLLHLMDVNLEHNHALNPSAARFLRCYKTLPSGMSKDLVVRAARGECSTSGD IEVPIFDDWGRLKIGEDDVAAINGFFADMQAKQANFFYLMDFYGEGHLRSVFWADSRS RAAYQYFNDAVWIDTTCLRNRFDTPLVLFLGVNHHGELVLLGCGLFSDESTESFLWLL KSWLTCMKGWPPNAIVTDDCAAIKAAVREVFPNARHRISDWHVLRSISEKLGESAQFE GMKTELETVIYDSLKDDEFEARWNNLISRFGLQDNEWITFLYENRHFWVPAFLKDTFW AGLSTVNHHESPNAFFEDSINPETKLVTFLSSYVNLLQNKYKMEEDDDLESLSRSRVL VSKFPMEEQLSRLYTFKMFTKLQNELNATMNCEVQLDDSTSSIVVIDLAESSGEMVNK KYEVVHCMETDRMECNCGLFQFSGIVCRHTLSVLKCQHVFDIPPCYVLNRWRNDFKQL HALDNPWKDLVTSNHIERYDYVSLQCLRLVEIGASSDEKHQHALKLIRDIRRTLLDDN LCRELEQKLTPSERAINGDSHMQAGSSEGGPAKKRRGRPPKKSKDTNVESVSNQYAHK DSLLVSSDVSQKDAFHSSSTASNLGTHVRTNGVVDLMEEVNPNELSFDSRYGVQSSHP HHYGNQLHPSNTMQFGQTTSTAEHSRVQWMYQNIFQDDQVPYGRRT</aaseq>

Gene Sequence

<dnaseqindica>179..2224#2302..2412#2506..2610#2715..2780#2889..2921#gtcctcgcattcaacggacaacggcccatcaagtccattgcctcaaccctagtccccaactccgcccccaccgccgcaggcgcgccgccgcctcgccgacccgtcgccgtcgtcgtcgccgcctcgccacgcctcatcatacccctgtaacatcgcgtccgccacctcgctcgcggccatggtggacgcggcggcggcggcggcggagtgcggcgagctggacgggacggacgccatggcctacggcgacgaccggacgccgcgggacgggatggtgttcaagtcgtacgaggaggtgctcaacttctacaagcgctacgccctccgcaccgggttcggggtctgcgtcaagaagtcgtccttcaccaaggccggcctctgccgccgcctggtgctcgtctgcaacaagtggggggacgggaaggaggacgcgtgctaccaggcgaggccgacggccaagaccaactgccaggccaccgtcgtcgcgaggctctggagcgatggcctgctgcacctcatggatgtcaatctggagcacaaccacgcgctgaatccctccgcggcgcggttcctgaggtgctacaagacgttgcctagtgggatgagtaaagatctggtggtgagggctgccagaggggaatgctcgacctccggcgacatcgaggtcccgatattcgatgattgggggaggctcaagattggggaagatgatgtagcggccatcaatggctttttcgcggatatgcaggcgaagcaggcgaacttcttctatctcatggatttctacggggaaggccatctgaggagtgttttttgggccgattcgaggtccagggcagcgtaccaatatttcaacgacgctgtttggattgatacaacctgcttaagaaataggtttgatacaccccttgttttgttcctaggggtgaaccatcatggtgagcttgttctgttaggctgtggcttgttttcggatgagagtacggaaagcttcttatggctgctgaagtcgtggttgacttgtatgaaaggatggcctccgaatgccatagttacggatgattgtgccgcgataaaagccgcagttcgtgaagtatttccaaatgcacgccatcgaataagtgattggcatgtgttaagaagtatctctgaaaagttaggagaatcagcacaatttgaaggaatgaagaccgaattggaaactgtaatatatgattccttgaaggatgacgagtttgaggcaaggtggaataacttgatcagtagatttggccttcaggataatgaatggatcacttttctgtatgaaaatcgccatttctgggtccccgcctttctgaaagataccttctgggctgggttatctactgttaaccaccatgagagtccaaatgccttctttgaagattcaatcaacccagagaccaaattggtgacattccttagcagctatgtgaatcttttacagaacaaatacaaaatggaggaagatgatgatcttgagtcattgagtagaagcagggtgctagtatcgaagtttcctatggaagaacagctatctagactatacacctttaaaatgttcactaaactccagaatgagctgaacgcaaccatgaattgtgaagttcagttggatgattcaacatcctccattgtagttattgatctagctgagtcaagcggagaaatggtgaataaaaaatatgaagtcgttcactgtatggagaccgacaggatggaatgcaactgtggcctgttccagttcagtggcattgtttgtcggcatacattatcggtgcttaaatgtcagcatgtttttgatatacccccctgttatgtgcttaacaggtggcggaatgactttaagcagcttcacgccttagataatccatggaaggatttggtaacaagtaatcatattgagcgctatgattatgtttctttgcagtgcctccgtcttgttgagattggagcatcatcagatgagaagcatcagcatgcattaaaattaataagagacatacgacggacccttcttgatgataatttgtgccgggaattggagcagaaacttacaccatctgaacgtgctattaatggtgacagccacatgcaagctggctcatctgagggagggccagcaaaaaagcgccgtggccgtcctcccaaaaagagtaaagatacaaatgtggagtccgtgtcaaatcaatatgcccataaggtatctccttacgtcgactatgtgtactttacgctagtttgttatttgtactaatcgagttcattcttgtattgaaggattctttactggtatcatcggacgttagtcagaaggatgcttttcattcttcttctactgcctcaaatcttggtactcatgtcaggacaaatggtgttgttgaccttatggtagtaattatgatcgatgctgggttttgttccgtacattgtttggtatgatagtcttgactatgtagttactttttattgtgtaccttccaggaagaagttaatccaaatgagctatcttttgatagccgttatggggtgcagtctagccacccacaccattatggcaatcagctgcatccaagcaacactatgcaggttttttttttcttttcaacaagaagcttgcatttccatttatgatttttctcccacatgtgcaactgacaaaaagaagtaaataatttcttaaaattggatagtttggccaaactacatcaacagcagagcactctagagtccagtggatgtaccagaatatatttcaggtggatgcttactttgcatttctagtacttttgtagagtttgccagaatcaacattttactgtagtaatgtgatttgtatatgcacttatgtgttataataaatgtaggacgatcaagtgccttatggcagacggacatgacagcaatcaaatactgggttcagatggtgccatttcaggtttctttctcattttagttactgtaccattttagggttctgacttctgagctctaactccgaagcagtcccaccatcagctcatcagtcatcacgattgaatgttgcaaattttgatgagcagagcatggaaacaaacagatacactcaaaattgtacgatatgtaggcaagtcttctacactgtaaattcaggaaccctgtattttgtagttagatacccccaaactcaatggtaatgatacttcacagttcacattcacactcttgggcacacaaacattgatggataaaattgagatgttgtaggggcagaaatatttcataaacccaggaaattctgaatttaattagtccctgtgactacggcatcatgttctctactaatatatgattcaccataacttggcactgaccataacatatatcaagtgttaatagatctgcgtcatgtgcagtcatctgttgaatggctgtacatctttttttttttatatgttgtgtccattcctaccttttctatttatcagcataataattacttacggagttcacttatatgcatgtataggaaaattacttaaggcacctgcaactgcaccgtctgaatcaatgtgaattttggagttcctgtatttgatagtgtgtaacatatattgaaattatagccttttgttttgcaattcaacacattaactgttgcctcgctagagaagatacagagaaacaccttccaactagtttggctatctggaaatttcagcatttcaaatactaagctcattgcatatactggataaggaagctatgttgtttctaatcaggagatagcattccttctgggacatttccaaattctgagactaatttctaatgattatctttcacgccgcaggttttcatcagacatacagaaggaaagaactctttctcaagaaaacaaactcaagggaggcattcccctctggatgtagagcagatctaacatcagaataatcggaacacagtaatgtggcacaaactggtcattttgtctcgtctatagaaaactaggaatgtagtcatgttacatctcagatcttgaagcagctaaaattcggtcgctttctcgtaagcagtgacctagcttgaaatttagtctaatcaagagtactcctccattgacatgtgaattctttcgtttgttcttgtgtaaatacccgagcggtgaacattgaaggtaaagaaaagaccaagcctggggatcattctg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0843700, RefSeq:Os03g0843700