Os03g0844100

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Revision as of 13:09, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0844100| Description = Similar to Pti1 kinase-like protein| Version = NM_001058405.1 GI:115456538 GeneID:4334756| Length = 5612 bp| Defini...")
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Gene Name

Os03g0844100

Description

Similar to Pti1 kinase-like protein

Version

NM_001058405.1 GI:115456538 GeneID:4334756

Length

5612 bp

Definition

Oryza sativa Japonica Group Os03g0844100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:36331428..36337039

Sequence Coding Region

36331724..36331870,36332008..36332094,36332866..36332998,36334878..36335151,36335234..36335360
,36335489..36335736,36336229..36336319

Expression

GEO Profiles:Os03g0844100

Genome Context

<gbrowseImage1> name=NC_008396:36331428..36337039 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:36331428..36337039 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggcagtggttttgttgtaattgccactttgacgaggaggatgaccatgggaaggaacgctccaatgctcagggcaataagatggatgccaagcaaaagtcttcaaaacctcctgctggtcaacctgaaccagagatagccccacttacaattgatgtccctgagttgtcactggaggacttaaaacaaaaaaccgacaattttggatcaaatgctctgattggtgaaggttcatatggacgagtataccatgccactttggatgatgggaggcaagcagcagttaaaaaattggatgcatctgaaaatgagcctaacgacgaattcttgaaacaggtctcccaggcatcaaggctaaagcatgaaaatcttgtggagatgttgggttactgtgtagagggcaattatcgtatactggcatacgaatttgcgaccatgggttcccttcatgatgttctccatggaagaaaaggagttcaaggtgcgcagcctggtcctgtacttgattggacgcagagggtaaaaattgctatagaggcagcaaaaggcttagagtacctgcatgagaaggttcagccttcaatcattcatcgggacatcagatcaagcaatgtacttctgtttgaggacttcaaggcaaaaattgcagatttcaatctcttaaatcaagctccagatatggcagcacgccttcattcaactcgtgtattaggaacctttggatatcatgcaccagaatatgctatgactggccagctgacgcagaagagtgatgtgtacagttttggtgtagttcttttggaactcctgactggaaggaaaccagtggaccacacaatgcctcggggacagcaaagtctagtcacttgggctactcctagattaagcgaagacaaggtcaaacaatgtgtagatcctaggttaaagagtgaatatcctccaaagggagttgctaagcttgctgcggtggcagctctttgtgtccaatacgaagcagagttcaggcccaacatgagcattgttgtcaaggcgctctctcctctgcttcaacaaaaaccagcagtgccagctgcctcagagccggcgccagcaactgagaattaa</cdnaseq>

Protein Sequence

<aaseq>MRQWFCCNCHFDEEDDHGKERSNAQGNKMDAKQKSSKPPAGQPE PEIAPLTIDVPELSLEDLKQKTDNFGSNALIGEGSYGRVYHATLDDGRQAAVKKLDAS ENEPNDEFLKQVSQASRLKHENLVEMLGYCVEGNYRILAYEFATMGSLHDVLHGRKGV QGAQPGPVLDWTQRVKIAIEAAKGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIAD FNLLNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP VDHTMPRGQQSLVTWATPRLSEDKVKQCVDPRLKSEYPPKGVAKLAAVAALCVQYEAE FRPNMSIVVKALSPLLQQKPAVPAASEPAPATEN</aaseq>

Gene Sequence

<dnaseqindica>5170..5316#4946..5032#4042..4174#1889..2162#1680..1806#1304..1551#721..811#ggctttaactcgagcaggcaaccaggacgcggaggctgcgccaccgccgccgccgccgctgccgctgccggccacttcctccaccctcccctgagcctgtgcgcgcccaagctccacttcgtctcgcctctgaaccctagctccccctggtggtgtctcgaattctctcgtcgcgccatcgccatcgaacccggcggtgatttcgtttgcttggtgagtggtagccctctgctctgatcgctgttccatcagtgtgggttttgcttctcactttgctgtcagcgtaattcaaatccatacttctgtctgggagtggatacccccaatccatcctggttattagcactttgattattattattattattattattattgcttatttaagcgattggattgctacgctcgcatagtacctgaaatagccgtactcacagtggtttgtagattactagattttaggtttactgcttctaagaaggcatgttggtccacactgttgcatgttgaatctggaaactgtaagcttttccgtagaggaaaacagtaagactctagttgacttagttccaacctgctgagagtacagatgttgtacactgtacagaagtgtacttcttgcgtaatttaatgcattggtcaattatgtgctctgatctttatacgtatgctaactattccgtgcatttggttcaggtgttcaagttgtgaggagacaatatgaggcagtggttttgttgtaattgccactttgacgaggaggatgaccatgggaaggaacgctccaatgctcagggcaataagatggatggtgcggttattttgtcgtgtgttttccatgtgaatttcagtaacagttggcccattataagattgctatagaaccatcctttactcctcttttgttatgatgcaattggagtaaggaccatactaacatatgcgccactatatttaccatcctatgcaaattggctggaagatgtttcaagctgtgttcgtggaatgccagttcttgcttttatatagcaagctactgttgcattaggcaaattacacttatattcttttgagcctaattcacaaaaagttctgtgggtggtaaagttgggtgttaatgctcttgtgacagacttggttctttctgttgtttattttcacttgaacattggaagatattctgctatgatctatttgagtaaataatttggaatgtgtatgatgtatgactactagctgatatgaagttttgatgttgaagttgaaccctttctgattatattgttatgtttccattcatcagccaagcaaaagtcttcaaaacctcctgctggtcaacctgaaccagagatagccccacttacaattgatgtccctgagttgtcactggaggacttaaaacaaaaaaccgacaattttggatcaaatgctctgattggtgaaggttcatatggacgagtataccatgccactttggatgatgggaggcaagcagcagttaaaaaattggatgcatctgaaaatgagcctaacgacgaattcttgaaacaggtgatcacttgcagaatcataggtttcttagcttaaatttcacattgtctatttgtctgtctcaggacttgatgacagtgcaacaattctaaagctattacttttgtttatgtttttgtggactctaggtctcccaggcatcaaggctaaagcatgaaaatcttgtggagatgttgggttactgtgtagagggcaattatcgtatactggcatacgaatttgcgaccatgggttcccttcatgatgttctccatggtaagaccttgagcacctactatctttagcatgtggaatgcaaatccaggtcagttataatcaacttctcttaacacaacaggaagaaaaggagttcaaggtgcgcagcctggtcctgtacttgattggacgcagagggtaaaaattgctatagaggcagcaaaaggcttagagtacctgcatgagaaggttcagccttcaatcattcatcgggacatcagatcaagcaatgtacttctgtttgaggacttcaaggcaaaaattgcagatttcaatctcttaaatcaagctccagatatggcagcacgccttcattcaactcgtgtattaggaacctttggatatcatgcaccagagtaatgtctaatttataccaatgcatttcttcatagaactcactatatcgcgtcttacttcaatttttaatccagcccaacagtagttaaaatatatgttttgaaccaactaaaatatgttaatactgacatagtgtattgaaaaactgagagagtcactgtggtgtctattcttgtcaatgtggtaggtcccatctttaaggattgttgccttgaaatgtcaaaggtctgatatgttttttttggatgaacaaattcgtaggttatcctcgtctagtttgctttcatatttttgctgtgcttgtatggttgtattcatgggcaagggtgcacataccttcaggttcatatcgaatagacatcaccagagctatcttatgtgctcctaagatcagaactgtgtactctcagtgcctccaaagtaacaccagaggcagtggctggctggcagccctgccgaccagggccacatgcatgaagcctcaaatgtggaggccatggcacaatactgtgagacttactgacctaaatgacaatggaccaaacagtgtgagtggttgtggtatttttttttttcttttgaaaaagaactccctgatccaaactgatgacttcttttttcacaagattgcatgaaaaactgctgaggctagtgaatatagaaattcatagtataactttttagaaactaaggccgacttggtgatcctgggccttgacgaggtggaagatctgtctggtttttataattgcaacagtttttttttacacatttggcaagtaaattaatgttcgctatgtatccaagagatgacaagtaattctgaccttactgttttaatcaagcaatgactatttttttttcttggccattacacttccattttgatagtatgatatcctgttatacattgatattgagttgtcttgtacattgtagtacttatttgggccttaagctatgtatgctatttttctgttagcagaatagcaaactgatctagttaatcggtttggcaggaaacatcaaatagtacgtagaaccaagtattgaatgcctttgggttgtagtgaaatttatgcatgtagctgttcttacataaccttttttttttgtttgaaaaacagctgacaatggtaccatgtaggtgttgccaaaaaacaactttacttattttgggtgtgattatgccatttaaggtctgtcaacacaaccactatctttggatagtgccttatattttttttttgggaaagccaacttattttgggtgtgaatatgccattttggagagaggtctgtcaacacaaccagtatttgggcagtgccttaatttctttttgggggaagtcaactgacatgttatactccatattctgtgaaccactatctgcatgcagcattcattctggaaagttatgcagaacattgctaatttgcataatgagtgtgatgcatctaagtgatttataacatcatgttggattacctaggctgaattaagcaggaaccttttacgactgacctcttgagcattattatgattattatatttgtttgttgcgatatttcttctacctgcaaagctattatatctggagcaaacataatgcctttactttcctctgcctacaaaggaaaaatctgttcactaattttgtgttttatctgttttgttgttatttgatcttttcaccgtcttgtgtaagttaattgtaatttctttagaaacaagtcttttgtttgctagtttgtccaggtagatgaacgtttcagcgaaatgaggataagtgttcttggcatgagttgtggaaatacttgatgccgtgtatttttatgcatttcctctcttaacttatataaccctacttgccgcagatatgctatgactggccagctgacgcagaagagtgatgtgtacagttttggtgtagttcttttggaactcctgactggaaggaaaccagtggaccacacaatgcctcggggacagcaaagtctagtcacttgggtaagttgtctctaccacctaaaagcggagtcgtccatacgctccttcccacgcgtcacaaagcacacaagcactgccttctaggcctgaaaataacagaaaaataccagttgtatgcgccttatgctcgatccagcccattcccagtcgtatgggcccatgcaacccattctcagttgtattcgtctgttgcaacgcacggacatgttactagttttcttatcttgtttttgctttggttgctaatttttttggtcaattataataattttcttcatttctactggttatatgtaaagaccaagaaagtaattagtggcaagagaagacatcattgaggaacatgaaacaaaagaatctagccaacaaaagcatgctgaaataccgctatgaacgtctagcagagtccatcaacttattgaaggttcaatgaatcagcactgcaaatcgtagcaataactgtctgctaactggacactgacaatcctagacttaaatgatttctaaataataattagttaggtttataggtcgctttggatttgattatttgaataaaaaacaacctgtatctggattgctatagagaaccttgatttctcaaatagtttacatttttcctttttttttctcaaatacatattacaccttttctgattccatctaattagccagactactcccgtagtgagatagaaaaggtagttgttccaaatttaagaaaaggtagttgttccaaatttaacttgtttgtgtactttttctctccaggctactcctagattaagcgaagacaaggtcaaacaatgtgtagatcctaggttaaagagtgaatatcctccaaagggagttgctaaggtcagtctctcgtctctctctctctctcacacccacccacacatacacacactatgatgcacatgctttttacatcatttggagtagcagtcctgaaataatgtcatgttgatgtacttggttgcacttatctgcagcttgctgcggtggcagctctttgtgtccaatacgaagcagagttcaggcccaacatgagcattgttgtcaaggcgctctctcctctgcttcaacaaaaaccagcagtgccagctgcctcagagccggcgccagcaactgagaattaagatgttagctcatggtagacctcccggcacatgccagttcgtaatcagcgcattctgtgtgtaattgcaattggtttaagaagtttcttttgtggggttctctgttggatgcagatcacatggatttctctttgccttttgttgctaccttaggtttgcggtttgagatttgtgctgtacattggtctgtaggtgcaagaatactgcttcctctcttttccacagcttcacttcagaggtgtcaaatactccagacatcgtttgaactttcaatagatgcaacatgttctgaattt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0844100, RefSeq:Os03g0844100