Os03g0844900

From RiceWiki
Revision as of 13:09, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0844900| Description = RNA binding S1 domain containing protein| Version = NM_001058410.1 GI:115456548 GeneID:4334761| Length = 3236 bp| D...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0844900

Description

RNA binding S1 domain containing protein

Version

NM_001058410.1 GI:115456548 GeneID:4334761

Length

3236 bp

Definition

Oryza sativa Japonica Group Os03g0844900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:36371394..36374629

Sequence Coding Region

36372334..36372540,36372630..36372711,36373168..36373288,36373368..36373527,36373882..36373943
,36374095..36374254,36374341..36374568

Expression

GEO Profiles:Os03g0844900

Genome Context

<gbrowseImage1> name=NC_008396:36371394..36374629 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:36371394..36374629 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctggcagcggcggcggcggctctccggccagcgcccaccaccgcggccttctccccctccaccgcgaggtccccgccaccaacgctcctctccttcgctcctccccgctctcaccagcgattccacctctccgccaccgccgagggcgcgggcaccaccgcggcgcaggaaggcgcgtcggcgtcggcgtcggctcccccggtcgacgaagcgcgactagcgcagttcgcggcggattggcaggcggcgcgcgcggagagggaccaggggaagatcctgaaactgcaggtgatacgggccaacagcggcgggttgatcgtcaggttcaactccctccagggcttcgtgcccaaccctctccttagccccgcgcattggtgtaaagaccccaaaaggcccattcaagatgttacaaaggaccttgtgggttcttccatttctgtcaaggtggtcgaagtgaacgaggaagaaaggaagcttgtcttctcagagaaggatgcaagttggttcactcattcttctctagtcaagattggtgctatctatgatggaattgtcggttcagttttccactacggtgcatttgttcatctgcgatttcctgatggaaattatcatcttactggccttgtacatatctctgaggtctcttgggatcttgtccaagatgtccgggattttttaaatgaaggtgatactgtcaaggtcatagtggtgaacattgatatggagaagtcaaggatagctttatcaatcagacaattggaggaagatcctctactggagacattggacaaagttattcctttggaggctgatcaatcacctagtgctgggatcatatcatctgattcatctccttcagaagctgatcttcttccaggacttgatggtatatgtaatgaactattgcaagaggatgggtatgatttctgtttgtgtgtttttttttttttggtgtatggttttttgatgttgatgtactactttatgtgcccagtagctcttcttgactag</cdnaseq>

Protein Sequence

<aaseq>MLAAAAAALRPAPTTAAFSPSTARSPPPTLLSFAPPRSHQRFHL SATAEGAGTTAAQEGASASASAPPVDEARLAQFAADWQAARAERDQGKILKLQVIRAN SGGLIVRFNSLQGFVPNPLLSPAHWCKDPKRPIQDVTKDLVGSSISVKVVEVNEEERK LVFSEKDASWFTHSSLVKIGAIYDGIVGSVFHYGAFVHLRFPDGNYHLTGLVHISEVS WDLVQDVRDFLNEGDTVKVIVVNIDMEKSRIALSIRQLEEDPLLETLDKVIPLEADQS PSAGIISSDSSPSEADLLPGLDGICNELLQEDGYDFCLCVFFFLVYGFLMLMYYFMCP VALLD</aaseq>

Gene Sequence

<dnaseqindica>2090..2296#1919..2000#1342..1462#1103..1262#687..748#376..535#62..289#cccctccacggccactcattcctccctccccaccaccaccaccaccaccggcggcggcgcaatgctggcagcggcggcggcggctctccggccagcgcccaccaccgcggccttctccccctccaccgcgaggtccccgccaccaacgctcctctccttcgctcctccccgctctcaccagcgattccacctctccgccaccgccgagggcgcgggcaccaccgcggcgcaggaaggcgcgtcggcgtcggcgtcggctcccccggtcgacgaagcgcgactagcgcaggtgcggagatgttttgttcgtgctgtttttggtgcgatgttgacgcgcgtgtgatcgagtgagggtttcgtgttgtttggatgtagttcgcggcggattggcaggcggcgcgcgcggagagggaccaggggaagatcctgaaactgcaggtgatacgggccaacagcggcgggttgatcgtcaggttcaactccctccagggcttcgtgcccaaccctctccttagccccgcgcattggtgtaaaggtagtcagtttctctagtttgagttgtttgcagaatttgtccagatttttgaaccagctctagctgcaattgatcgccggattaagaggtgattgcagctgtgggctaccgtaactgaactcatggtggatgtatggttttttccttgtagaccccaaaaggcccattcaagatgttacaaaggaccttgtgggttcttccatttctgtcaaggtaattaagaggcttcaattaccttttgagctaccaattagattatggtactataccatgcagtagtacaaacacatgctggttttggatcaaaacgctgatcaatgttacttttagtttgcttgtgtggcggaatttcagtattaaactgggtgtccctctccaaggaactgtgatattctttaactttgctttctaaactgcattatgattttttttcaagcacattctggcaaagttgtatcattggctttcaattctctattactatgggtacaatctaagagcgggcaccagattgtaggattcgaactttacacatttttcttcagaaactgaagctaattactttaggtggtcgaagtgaacgaggaagaaaggaagcttgtcttctcagagaaggatgcaagttggttcactcattcttctctagtcaagattggtgctatctatgatggaattgtcggttcagttttccactacggtgcatttgttcatctgcgatttcctgatggtacccattggcaacaccccttgtcatttttgttggtaaatgttttgttgattttctgacaaaatctatcctcaaacaggaaattatcatcttactggccttgtacatatctctgaggtctcttgggatcttgtccaagatgtccgggattttttaaatgaaggtgatactgtcaaggtcatagtggtgaacattgatatgtaagtatctaatacttctttactgtcttcctccacaattgtcagcatgtgtattcgcaatgtagtttctcgtgatctcattccatactttttcaagaaagtttgcaattatataatcaatgttgactgtaccaatgaaaaatagcatatgtttaattgaatctagcgatggagaatggcgcaatacaccttaaatctatatagattaggatttaacgatgcaataactattgagaacacagattgtctttaaggaataccaagttgatgcattgaaatagatcacttatgactcttgagggctgatgaataaaatgagaggagtttatgatctatttttttttcctatcattgctttcttcgcaatagggcaaatcagcatatgctggaagaattatcatgaatcagaaaattatgttacataatctgatactgatgcatttccttcacaaatagggagaagtcaaggatagctttatcaatcagacaattggaggaagatcctctactggagacattggacaaagttattcctttggttagtttgtcgaaagcacgtgtctttgtggcaggttatttagctttgttattttaaaggtcaactcatgcattaatattggtttataggaggctgatcaatcacctagtgctgggatcatatcatctgattcatctccttcagaagctgatcttcttccaggacttgatggtatatgtaatgaactattgcaagaggatgggtatgatttctgtttgtgtgtttttttttttttggtgtatggttttttgatgttgatgtactactttatgtgcccagtagctcttcttgactagagaacagttttgttaaccaggagggaacccatgaataggtttttacgttgcaatctccatgttttaatcagttctatttcttcacagtataacagacgtacagtttgggcgccgagcattggagaaacgtgttgtttcacaagatctggaactctggctttccagtgtatgatccaaaatgtctccaatttaaccagtcgaagctcacaagatagaaacatggactgatgtgttggatctcattgtgcaggtgccagctaaggacaatcagttcaagcttcttgctcgagctgggcgacaggttagtttcttcttgatatagcactgttttcttgttataaggagtttcattaggcaaggattgatgtttagtcggttttcagtcccaactgaacagaaaacaaaggtacatcctgtaaaaccaaaatatcaaacaagtcttcaaaatggttacaccggaagttagtacgacaagttttgtgaaagattgtaatggttgtctgatgagcgtgccgttggaataattgttgtagttgtgtgacagagtgtaagtaaaaaattataatcctttaaactggcaggtccaagaactatatttgacaaccagcctagaccaggagggcataaagaaggcggtacagagagtactaggacgtgttccttgagtttggagaacagcgagtatgaggcagcatgcctgtactccccccaattttctgaccaaccgactatagtgaaacaacagcacgagcagacaacctgaaaagttcgtcgttgtttcctcattctgatgctgagcttcctctcagctggagactacttaaccgaaaattgcaaattttgtcagtaatacaatgagtaggtagttatcttcgtgcatgcatgtacctatctgaaacctcaaggccacctgtatatatatcagtattcatcttcagtg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0844900, RefSeq:Os03g0844900