Os03g0853600

From RiceWiki
Revision as of 13:10, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0853600| Description = Conserved hypothetical protein| Version = NM_001058465.2 GI:297601999 GeneID:4334818| Length = 5047 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0853600

Description

Conserved hypothetical protein

Version

NM_001058465.2 GI:297601999 GeneID:4334818

Length

5047 bp

Definition

Oryza sativa Japonica Group Os03g0853600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:36806279..36811325

Sequence Coding Region

36810261..36811274

Expression

GEO Profiles:Os03g0853600

Genome Context

<gbrowseImage1> name=NC_008396:36806279..36811325 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:36806279..36811325 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggctgctccgccaccgccgacgccaccgccagcgtccagccccgcgccaccgcaggaccccgctaccggcggcgacgccctcgcctcctatctcggcctcagcttcgccttcttcctcgcctccctcccgggcggcacccccgccgcgcgccacctcgcctcgctccagtcccgcggccgcgtcctcgccacgcgcctcctcgccgccgaggaccagctccgccagctgcgcgcgcgccgccgcgacgacgcccgcgccaatgcccgcgccgccgagatcttcgccggccaccgcgcctcctggatggacaacgagcgccgcctcctcgcccgcgccaccgccgccaccgacgaggccgcctccctccgcgcgcgcctcgccgaggccgaggccgacgccgccgcgctgcgcgcccgcgtcgaccgcctcgagcgcgaggccgccgagcgcgacgatctcatcaacgcgctcctcgcggccacgcgcgccgccgatgccgacctacgctccaccgacgacgacccggagccgcgggacgcggagcagcaccaccaccaccagccggcggctgcggcgttggatttggatccggccgaaccgcgcggcgctgacgccgacgcggaagccctggctgcagccgcggctctctacgctcagcagcgccagcagcaggagggtttcggcagcgacgacttctacacggcggcggcggcggcggcggcctcgggaatgcagcagccatggatggagcgatcaaaagggtggcaggtgagacgacaaaaagctggaatccatcccctttctctcccattgaccccttccttgtttcttctcttctctactaacacgttgccttcccttactactactcctacactaccacttacttccaatgatcttactccatcgagcacttatattctactatcttcccaggaagtagtaaatctattggtggattgcttaatgcttatccttttaatggctgctactgctaatggatga</cdnaseq>

Protein Sequence

<aaseq>MAAAAPPPPTPPPASSPAPPQDPATGGDALASYLGLSFAFFLAS LPGGTPAARHLASLQSRGRVLATRLLAAEDQLRQLRARRRDDARANARAAEIFAGHRA SWMDNERRLLARATAATDEAASLRARLAEAEADAAALRARVDRLEREAAERDDLINAL LAATRAADADLRSTDDDPEPRDAEQHHHHQPAAAALDLDPAEPRGADADAEALAAAAA LYAQQRQQQEGFGSDDFYTAAAAAAASGMQQPWMERSKGWQVRRQKAGIHPLSLPLTP SLFLLFSTNTLPSLTTTPTLPLTSNDLTPSSTYILLSSQEVVNLLVDCLMLILLMAAT ANG</aaseq>

Gene Sequence

<dnaseqindica>52..1065#agtcgagcacacactactacactacactagtaggagtagaacctagagaaaatggcggcggctgctccgccaccgccgacgccaccgccagcgtccagccccgcgccaccgcaggaccccgctaccggcggcgacgccctcgcctcctatctcggcctcagcttcgccttcttcctcgcctccctcccgggcggcacccccgccgcgcgccacctcgcctcgctccagtcccgcggccgcgtcctcgccacgcgcctcctcgccgccgaggaccagctccgccagctgcgcgcgcgccgccgcgacgacgcccgcgccaatgcccgcgccgccgagatcttcgccggccaccgcgcctcctggatggacaacgagcgccgcctcctcgcccgcgccaccgccgccaccgacgaggccgcctccctccgcgcgcgcctcgccgaggccgaggccgacgccgccgcgctgcgcgcccgcgtcgaccgcctcgagcgcgaggccgccgagcgcgacgatctcatcaacgcgctcctcgcggccacgcgcgccgccgatgccgacctacgctccaccgacgacgacccggagccgcgggacgcggagcagcaccaccaccaccagccggcggctgcggcgttggatttggatccggccgaaccgcgcggcgctgacgccgacgcggaagccctggctgcagccgcggctctctacgctcagcagcgccagcagcaggagggtttcggcagcgacgacttctacacggcggcggcggcggcggcggcctcgggaatgcagcagccatggatggagcgatcaaaagggtggcaggtgagacgacaaaaagctggaatccatcccctttctctcccattgaccccttccttgtttcttctcttctctactaacacgttgccttcccttactactactcctacactaccacttacttccaatgatcttactccatcgagcacttatattctactatcttcccaggaagtagtaaatctattggtggattgcttaatgcttatccttttaatggctgctactgctaatggatgattagctagggcgcatactacatttgggaaattttaatgttactgttagacttaaaatttttgtatgacttaaaattttcacggcacaagtttttggtgtgtctgtttttgccagaaaacagataacagtgcctatcaaattgattgcaagaaaagttcgcattcaactgcatacttaatcacacataactttgtacttgtctcagaaatgtccaaaccgcctcgatttactacattttcttgttccccttgtccaaaccgcctctgttagtttgggtttagtagcagtaggcttatgccctttatccattatctgtgaactgtaataaacaatcaaattttgatgtagttaatgctaagtcttaggtgtaacatcctgtaattgctctccgtgcacgatttcccagttgtgatagtgataccaccatgaaccttcatacaccatgtcatattgcagaacatagaacagacaaacgaccactttgatagctttctgcatccactggaatcctgatacaaaacctgtggggtaaaccatgcaagaaagctacctgtaccgtatctggctcatttggaacctgtgatgcgatcacaggattcctgttgttgctcatgctaacagtgccatagaagactagtactgcactgcaccgaaataatcagatagccttaagttactctgtaaaaaaccatcatcattttattattctaaacatctcgccttgttataatgtcatgtagtctcgtagccctgatggattgtgcttatttttcatgatgcatcatttgatatttattatagagcacacatttttctcgaactcacaggagagatgcacataattacactaagaagattttatagatcacacttgataatcagcaaagcttttgtgctttataactgaacaaatatgtacctctcgttagcataattgagtggttcacataaatccatctcacactagtaaaactaatccctaacctaacataccgcacatgcccactcagtttcttttgttcatattcgttaccacattgagtacacatttttcttttttgattcatatgattgcaacctgtattttctctcctttctttgattttctgtcttcagatctgtgttgcaggataatcaaagttaaagatgatagtttattgttaacctttatggcctgaaaaagcacaagaatttaaagaaaaaaaatcaagttttgcattaagtaggaatcagtttgaaggtcaggaaggttgatttcatgggttctatatgtacttcattctgtgtattctaaaatggaaacagttttaattaaaccattagaaactgttcggtttcaactaacaccattgtttagttgctcttttctaaaatgtataaatagcaaattcttggaagggtagggccctgttgggagcatcgcttattacttacagtgaagggaagcttagctgggtgggttagtggaagctacagccttgttcattagcccatggccatatgctcatcttctagtgagtagcaatataggattgatatgtgggagtccataataggtgatgttggtgctgattactgctcctgggtgtctggttactggcatctggcagcattgttatacgcagtaatttaagatctattagggttgctggagcctgcacgtccaacaagactgctgcatacaaacactcagacatgacgctcatatgttaattgtaatgatactatgaagtgcagttttcatgccttggtcgacttgaaacagctgtctttttggctcagtacagtgatacttaaaagacacattttgatttaagcaagaatctatgcttttgttattggcacttaagcgaccactaatttgcatatatgtattttttttctagatacacagtgttacataaattgaaatgttgtaatggtgttgccacttaatgcaatgattgatttgcattaatatatatttttttcaataccagtggtacgtaaatggtatatataatcttattatcattgttctacgtaattatgttcatgttatatatggacacaaatcctaggtatcaatgtttgattgttggtgtcagtctgagcattgttagactagtaccctttttaaatttttatgtttgtggttcaatttttaatgttcatcttgtaggacctgaagtatgaaacggctgagccgatgtataacacaaaacatgctgtaccacggtaggttggcacttttcaattgaggcacatggtttcctgaacttgcaaatgaataaacgctagttaatgtttactctctaaacatcttccattaacaggagagaatcaccttggaaggtggatgtggaatcgtcaggagttcctgcaaagcttcaactgcttgagcaggaattaattaacctggaaaagattggaaatggagacttatccaagataccattggtgatgagaaagcaagtgaaaagataccaaactcttgctgggaagattgatgatctttgcaaaagaatggtaagcatcatcttttgatactgtatctagtcttttacttggatttgctgatactactgcataacttattcatagtgtataactgaagatgtgatgaatacattaatgtagcatatggctgttatgctaataaatacatgcttgggaagatctgggaatttgggtgttctaaagatagcggtgacttctgtctgttaaactagtcattctcggttaattgtagggaggaattaggagcaagggtttcctatgttggttaaaattgtgcttcactcaatgacattatgctggctcacttaggtgattcataaattctgaaaacgaatgtacactacttcactcactatgccgatatattgtttcctgttatgcatgatatcttttttactggtcctgtccttatctgtattagacagctgcagcaggagtgggaaactactaacttctatttatttggaattttgctcagcaaacaagtgacccctgtgattcaacactgagctcagagtttagaacacagaggcaaacagaatacttgctggaagcattccaccttcagcaccgagcaactgaaactaggcagaagctcagtgcactgcaagcagagactgcaaaaggaagttttggtgatgaactgacagcagaagccaaaatgagcacaagaagagcactgagttcaattcggaacaacttcaaggaaattcagcgtagcctagagatttggttggcaagaattctgggagaccttgagggcatgttagcaagggacggggcatcacgcataagggagtactttttgtctccctacgcatcagctgttcgatgataatcttagagcactctggtcggcacattaattcatcttcatcaggtaaagtatggatgaagttcagcatgtgaaatcgcagatacccttgggtcttaataggtattcttgcaaacattggaaggtatgaagagaagtgatcttagaccatactgatattttcactgatttcttttgaaccaaaggagaaacaaaagattggtttaggatgtctattttaacttcctatccagagtttttctcctctccttgccggttacatgttttgacacaaattggtcgtgtcctagatcacttttcttcacatttatccaaattgctgttgaggattccactggacaagggtgtgcgcgaacttgcatgaagtggagcattcacagtgtgtactacagatgccctacattagtttgcacatagacatcgatcagttggcggtgtcaatgtgcattaccgcagttcatttggttagtaattgtacaggtttatgcttatgcctctgataaatgctctagtctgtattaatcttgctagcttacatttaccgatttatgtacattgtaatttttttgatcgttgggccaacatgcggtgtaaatgctggatcactttggctgttgtatgaaactatcatgtgtgattcgtagcttc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0853600, RefSeq:Os03g0853600