Os03g0859300

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Revision as of 13:11, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0859300| Description = RNA-binding protein Lupus La domain containing protein| Version = NM_001058501.1 GI:115456730 GeneID:4334857| Length...")
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Gene Name

Os03g0859300

Description

RNA-binding protein Lupus La domain containing protein

Version

NM_001058501.1 GI:115456730 GeneID:4334857

Length

5801 bp

Definition

Oryza sativa Japonica Group Os03g0859300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:37116461..37122261

Sequence Coding Region

37117055..37117300,37117498..37117569,37121080..37121170,37121253..37121475,37121567..37121903
,37122009..37122191

Expression

GEO Profiles:Os03g0859300

Genome Context

<gbrowseImage1> name=NC_008396:37116461..37122261 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:37116461..37122261 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaaccctccgcctccgcgtcggctgatccgcccaggaggtctccatggaggcacccctccaacgggggcaaccccaaccccaacggagacgccgtcatcgacacaactagctggcccgcgctctccgaggccgccaggaacccccccaagcctcctccttgcatcgactctccatccgaggggcagggcaagcagtcgtctcgccacaagccggccaggcgcgggggtgccggtgccgaccactccccctccccacgggatgaccgcgccaccagctgggaccatggccgccaccaccaccaccacaacagtggtggtaggaggggctcttttggcggccgcaggagaggaggaggaggcgggggtttcgacgccttgtaccgtgcccctattggcccctatgtgcgtggtgccactgcgcccccgcccccgcccccgcctcccatggccgttgctcctccccccttccttcctccgcccttacgacctttcgcggcacctctcctctttcatcacgatatggcatcgcccgtctctcctgtttccccaatctactatgttggccctccccctcctccagaagctcttaggcctttgcctcctttcccccctaccatgcttgctccacctgcttacccttactaccaccctcaacctcaacccgaccccgagcccgagcctgatgctgatcctcaacaacatcgtgccaacctgctcaaacagattgagttctacttcagcaaggataacttatgcacagatgttttcttgaggagaaatatggatgaccagggctgggttaacattgctcttatagctggcttcaacaaggtccaggaatccactgatgacctgcaatacataaaagacacaatccagtcctcatctatactggaaatgcaggatgacaaaattaggaggcagaatgattggaacaagtgggtgattcctcgagagagcaacactgacgtgctgccaagccctaacatcaacaatctgacagcacatcttggaagcgtgggtctgcaggaatcagcagctagctcaagtagcatggtggatgaaaaccatcatgagattcttaccaatggaccaacttccggtaacaaccaagcaccagtagttgaagacggtgctggtaagctctag</cdnaseq>

Protein Sequence

<aaseq>MEPSASASADPPRRSPWRHPSNGGNPNPNGDAVIDTTSWPALSE AARNPPKPPPCIDSPSEGQGKQSSRHKPARRGGAGADHSPSPRDDRATSWDHGRHHHH HNSGGRRGSFGGRRRGGGGGGFDALYRAPIGPYVRGATAPPPPPPPPMAVAPPPFLPP PLRPFAAPLLFHHDMASPVSPVSPIYYVGPPPPPEALRPLPPFPPTMLAPPAYPYYHP QPQPDPEPEPDADPQQHRANLLKQIEFYFSKDNLCTDVFLRRNMDDQGWVNIALIAGF NKVQESTDDLQYIKDTIQSSSILEMQDDKIRRQNDWNKWVIPRESNTDVLPSPNINNL TAHLGSVGLQESAASSSSMVDENHHEILTNGPTSGNNQAPVVEDGAGKL</aaseq>

Gene Sequence

<dnaseqindica>4962..5207#4693..4764#1092..1182#787..1009#359..695#71..253#gatcaccaactccaactccaactccaactcctcctcctcctcctccttccgccgccgccgccgccagagcatggaaccctccgcctccgcgtcggctgatccgcccaggaggtctccatggaggcacccctccaacgggggcaaccccaaccccaacggagacgccgtcatcgacacaactagctggcccgcgctctccgaggccgccaggaacccccccaagcctcctccttgcatcgactctccatccgaggtctgtcagatgagatccctttcttcttcttctttttcttaccatcgcatcgcatcgtctctgcttatggtggatggatgtatcgtggtgatgatatacatacaggggcagggcaagcagtcgtctcgccacaagccggccaggcgcgggggtgccggtgccgaccactccccctccccacgggatgaccgcgccaccagctgggaccatggccgccaccaccaccaccacaacagtggtggtaggaggggctcttttggcggccgcaggagaggaggaggaggcgggggtttcgacgccttgtaccgtgcccctattggcccctatgtgcgtggtgccactgcgcccccgcccccgcccccgcctcccatggccgttgctcctccccccttccttcctccgcccttacgacctttcgcggcacctctcctctttcatcacggtaggtttttttttctccttctcctttgtatcatttttcatcatcatcatcctaattaatcttaatcttcttcttcattcattcccaccagatatggcatcgcccgtctctcctgtttccccaatctactatgttggccctccccctcctccagaagctcttaggcctttgcctcctttcccccctaccatgcttgctccacctgcttacccttactaccaccctcaacctcaacccgaccccgagcccgagcctgatgctgatcctcaacaacatcgtgccaacctgctcaaacagattgagttctacttcaggtcatctctactcttctctctttatgcatcaaccatttctctatagtgttgacaatgctcatgtttttccctccctccacagcaaggataacttatgcacagatgttttcttgaggagaaatatggatgaccagggctgggttaacattgctcttatagctggcttcaacaaggtcaccatacatattccttttcctaatctaaccattaccccttctctcccttttatttatatgcctatttcctataattgccatgttgccagtcattcattgtttcgattcctctatcctaacttttttctcttctgtgctcttattcttcttaacacaatctcctggcacattttttggggacacaattttaaaccgtttctaggtaccccgtttcccaattaaataacttcagagtttagactcatatccttggatagtcatctgttgcttttttacttctttacgttcattaagttcaccttggctaaaattaattcatgcatttgtcctgccagtagtaataatggcttaatgatggtcgcacctagaatatcgtgctttccccccttttacattgcatgttttggatgtttctctagaaatttactgtctgcttgttactatcttcgcgaatcctagcttttataagggcatgatcaaagccgatgatcgtaagctatgtcctccatcacgatctcgaatgaaactatccatggaatcgtgcgccgtgtattttgttccttaatatctaatataatgttccactatgtaatatacaagcctacttccatttctgtagcagacgggcacttcgttacaggagccgcctatagatattaattaattggagtgaaatatccccagctcaaacccatgttttggaagttgatttggcagttttagatgtgatctggatggttcagagtagtcgggtttactctagaaatgtgaattttcttagtcgggtttacatggaggctcgacctttggtgctaacaaaatgtgcatgagttctgctcctttggtgctaacacaatgcgcatgagttctgctgagctgctcaggttatatgagatcacgtgaattattggcttgtcatgttgcggtgttgcaatgaattgctgtttagcccttaaaaagtgattgtttgttttgatgtttacttggctgttctcgtgggggcatagatttgtttgattctaatagaaacggttttttatggtcatctgtccagacataacttgccattctgttctatatggtattgtttacccaccattcatatgtattgattatatttatattcgatgctttgtccttgctttcttcccattcattcctcttggtagaggaagtctctggcacttcatgggaattgtgtaatgaatgccagttagtttgagctaattggttgtgatggcatcaaaatcatcatgcgtcttctagttcctgcatagtaagtgcacatctcagagtcacgtggcatgacttagttgttctttgtgtatgttttggccctatgggctgtggtttgatttagttgtcttgcatcccaaaaaacaatgcaaaagttgtgcccttttgtatatatattttagttcctttctttacaatgtgaatccttttttaaattcatgtactcccaccatcctatatccactaatatatgacttgcatgaagttgatcaaagtatatgtatatttgatgtacaccattatgccaatggatttgtattttaaaatgatttcatatgattttggttttataccgccctttaatgtatattttttaagtagtccattattagattatgatcgaaatctaaacaaacacaaaagtggatgcagggagtatcactttattagtgtgtgctactagatttaggtgttaaaaactctatgattgatatcaaaggctagtgtacactatggacagttcatactttatacccaagctgttaggattaagttccttatgagctgccatgccgtgcttaaagtcccattatatgtcagcataaagaaataaaaaaaatgtcagctttctgaactgaaacgccacttaagaacatagaataacaccttgttttgcaaaggagaaaaaaggtcaatttgtgccttttacccttaaaatttaagttgcatacaagctagcttccttgggattttaaagctatatcgtatttcttaggagctatctttatatttgaaagctattcctttgttgtggttaaacattaaatatttcttattttggttaatattaaaacagacgatttacaatcattttggtcgatcaaactttaattcatgtgtgttctgttgggggtttttaaatagtttagaacttttttaagttaatattttttcacaaattatgttcaaatcaaattacttgtgtttaattactactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgttaatgaatctaggcacacatatatgtctagattcattagcatatatatgaatgtgggcaatgctagaaagtcttataatatgaaacggaggaagtatatatgatatatctactatgaagtcctagctcaaccagcattgcagttggatgtgaggtagactaaatgaaacacttttaatgcactggtttgcatttatcatatcattacaaatgatgctgttagcatgctagcatgtagatagaaccgatggtttgtgcactctttcttcattgctaagaggtgtgcagtgtttttttttccccatttttgcctccttcgaatgtatttttctccatgcaaggtatcattgtgcacaaatacagcatcatgttagtgtgtcacacattctgtaatatacttgaaaatgaaaaagaaaaggtagactggtggacataaacatgcaattcatcacttaggtcatttggaaaacatagcattgcgggctgttggtttctcttctttagttaatatacactaggttctttgatgaatagcaaaaagatcacacaagctacagttgcctgctgctttacgtggtctatacaatcccttcccccattgttgcaactgtactggttcataaatgtgtatccacataaacaattgagttgtacaccttgtattatcacatcatattaatttgaatctcctggttctagtttttaaaacaattttttaacatagaaaaaaacatgagaatgaaaagatgagactaaagacaaactgagtcaaaggttgaaaatcaacatcaatggaaaaaaaaatcatctaatgatacgcaccgagtgatcacggatcatagttcccataatggactcgtggtctggagctacaggctacatgctatttctatacacttcgtgttatatatttggacaatttcttgttgtgtggttgaagtatgcatagtcctcaactcctcataaagcaagctacttgatggaagaagcagaaaactcatgtgtttcgaattattgtgcttatgtactttatctattacacgtgaaagcatacagcttaatctggaaattactattattcttttgattttacatggtaattgcatagctgcagtgtgttacttactggacgcttgcatgtagttgcttggcactacctatttcattgattgttttaatcctgtttttcttttaactttgctggaaagttttattttgcaggtccaggaatccactgatgacctgcaatacataaaagacacaatccagtcctcatctatactggaaatgcaggtactaatctcatctgacatccagtttcttttatttcacaacaggctgttgaattgtcgtttagaaaataaaaagagcataaacatgggactgatgctcccttttctaatggcacagtgctagccttttgggatatgcttgaaactggaaacgttcccccctgcttatttaggtctttgtgcccctttgtcatgcaggatgacaaaattaggaggcagaatgattggaacaagtgggtgattcctcgagagagcaacactgacgtgctgccaagccctaacatcaacaatctgacagcacatcttggaagcgtgggtctgcaggaatcagcagctagctcaagtagcatggtggatgaaaaccatcatgagattcttaccaatggaccaacttccggtaacaaccaagcaccagtagttgaagacggtgctggtaagctctagctatgatggtacacattggctccaatctggcccatgctatgactacaagggttttgtccgagcgcgagtgacaaatgttttgcaattttttgatggcggtatgcttgcggggcgcactgactagtgagttcgtttctgggggggtttcaggtaaggttctttttgtctaccctgttattgaggtaccgtgaaggtttcagcctttcaggtggttggtaaaaaaaaaaagaagtgctgtagctgaaacaaaagacagcaaacagaaggcatatgtagaggcatcaaagaagatgaggggggtggggggagccattggacataatgaatgaaagacgatggtgcgctaagttaaaaggcactcgagtgcttaatattgcaactgctgaatggcctttgggcttgcgtgactatgggcctgaagtgtgctgtgaaccatgtcggttttctccccctgtttggatgtaaccctccaatttttaaaggaggatctgaactttctcgctcagagagtcaggaagttgacaattcgacaaggatcttttgcaactcaactcgttgaagtagcgtttgaatgttacaagttttgctagaact</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0859300, RefSeq:Os03g0859300