Os04g0110300

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Revision as of 10:56, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0110300| Description = Homeodomain-like containing protein| Version = NM_001058563.2 GI:297602046 GeneID:4334928| Length = 6569 bp| Defini...")
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Gene Name

Os04g0110300

Description

Homeodomain-like containing protein

Version

NM_001058563.2 GI:297602046 GeneID:4334928

Length

6569 bp

Definition

Oryza sativa Japonica Group Os04g0110300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:592870..599438

Sequence Coding Region

595183..595216,596423..597021,597112..597278,597361..597890,598635..598798
,598941..599168

Expression

GEO Profiles:Os04g0110300

Genome Context

<gbrowseImage1> name=NC_008397:592870..599438 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:592870..599438 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ttgctcaaggaagcgctaccattgcagaactcagaaattccaggctttggtggtactagctggactgaccaggagaccttgcttcttttggaagctttagaaattttccaagcaaaatggggtgacattgccgagcatgttgctacaaaaagcaaagcacaatgcatgctacacttccttaaaatgccaattatggacccatttctgcatgatggagatgttaatgaaatatctcaggaaactgcagagcaggtctcagcagaacaaggtacttctcgtgtaactgagaaaatggaagtagaagacaaaacaaaagaaataaaaactaatgatagaaaaactgctgcaaaaccaaaattgaacttgacagaaacagaagtaaacctagacgacaatgttgttgcaaataatgataccaagagttcaggtgatatcaatgtggatgtatgtagcaatactggtgtatcaaatagatcttcagataccgaacctacaaagaaggaaacttctggggaaaacacatcaaacattgttaatgatgtcctgaaatatgcttttgaggctgttggtcacattccaaagatagagggcttgggttcatttactgaagcaggaaatcctgtcatggcactggtggcatttctatctggccttgtggatcatgacgatgttactacgttgtgctgtagttcactgaaagctatatctgatatgtctcctgctcttcaactggcaacaatgcattgttttattcttcaggatccaccaaatgacctcaaagatccaccggtcagtataagctttgcaaacacagattgtgggcaacaaaaagacaaggatgctacttcaaatccaagtgttactgacaatgatgacaatttaaaagaagagtctgctttatctgtggaagagccaaataccacatccacatcatcgaaaaacaccaggaaattatctaatgcgaaggaatctaaggatgaatctccccaagtggagcccaaacccagtagtgccaacgattgtgacaatccaatttctcaggtggcaaagagggcttctgataatataagaggacacagttccactgtgcttcctgtcagtctgaataatacaaatgaaccttgttccatatcttcccaagaggctagtgcaggaaacacaaaggatacaagtcatacagaacacatagaaggagataaaccaatttatgaggatccaccattagaaggaaaggtagagttgaacaagatcgaacatgaagtcactgacttatctgctgtacagcaacatgagtccatccaaacaagtttgaagaagggctacatacaagatcataacagtattaagaaaacagttgccgatgatgtctccgtacaaaggctacagcgggcagcagccagtgctatttcagcagctgctgtgaagtcgaaactccttgcaaagcatgaggaatatcaaatccagcgactagctgcacttgtgattgataaacagctccacaagatgcaagcgaaaatgtcagttttcactgaagcagataatttggtcctgcgagcgagagaacacaccgagagaactcggaagaagcttctgatggagaggagcgcgataatcgcttctcggatggcggcattgccacccagaccaaaccaccaacctgggatgcctgggagcagattgccggtagggtatggtgtgaatcagcatctgaggcgatcttga</cdnaseq>

Protein Sequence

<aaseq>LLKEALPLQNSEIPGFGGTSWTDQETLLLLEALEIFQAKWGDIA EHVATKSKAQCMLHFLKMPIMDPFLHDGDVNEISQETAEQVSAEQGTSRVTEKMEVED KTKEIKTNDRKTAAKPKLNLTETEVNLDDNVVANNDTKSSGDINVDVCSNTGVSNRSS DTEPTKKETSGENTSNIVNDVLKYAFEAVGHIPKIEGLGSFTEAGNPVMALVAFLSGL VDHDDVTTLCCSSLKAISDMSPALQLATMHCFILQDPPNDLKDPPVSISFANTDCGQQ KDKDATSNPSVTDNDDNLKEESALSVEEPNTTSTSSKNTRKLSNAKESKDESPQVEPK PSSANDCDNPISQVAKRASDNIRGHSSTVLPVSLNNTNEPCSISSQEASAGNTKDTSH TEHIEGDKPIYEDPPLEGKVELNKIEHEVTDLSAVQQHESIQTSLKKGYIQDHNSIKK TVADDVSVQRLQRAAASAISAAAVKSKLLAKHEEYQIQRLAALVIDKQLHKMQAKMSV FTEADNLVLRAREHTERTRKKLLMERSAIIASRMAALPPRPNHQPGMPGSRLPVGYGV NQHLRRS</aaseq>

Gene Sequence

<dnaseqindica>2314..2347#3554..4152#4243..4409#4492..5021#5766..5929#6072..6299#gacgccaaaaatggagcccaatcccccgccgccgcccgccgccgccaccgcaacctaccgccgccgcggcaagcccaagcccaaacccaagcgcaaggcagccaagcccccctcgccgtccccgccgcccaagcgccaggcccgggacgaccccccgcacacggggccactcacccgccactcgccgctcaaccctgcgccggaggatgcaccgccccagctccacgccggggagcgcgacccgcctccgcgcgcctggatagagcccgcaaagcttccgccggtgagcgaggaagtccaggccgtcctgtcgcgcggagccggcgtccacgtcgtcccctccttcgcaggtaagcccccgactccggaatgaactaaaatttagggctattttttttcttacaaagccttcatgtttgttaaacaatgacttcattcatgggtgtaattgttatactgtctggttgtgagttttatccagatatgtaatgccaagttttatcgattctacttgtataaacacggtgaggaacaagttacaagtgtacgattgtatcttgattaagcggcggcgtcccttcgattgctcaaactattacattttctgctctactcgattgcaatctagctttaacagtgggattactgtttgtgcataaatgtggctcaacacttgggaacatgggactggacactagatgcagaatatcttcacatgaaaagatttatcttggttcttcacatgaaaaatatttgcttctttcaccaactgtgagttgttttgaccacgaactcattagttaagaaaaattcacaaaacacgaatcgagtaccatacattcataacatatagtgtaaaatggcaggccacttcactggttggatcggagaaaaccaggactagtggcttcgatgatctgccagaataaatgactggaaggtagaaagaccgctggctctagcatatatacatggggcaaagaatggcccaacccactcattggatgacccatggtgaattttaggcacagtttcatggaaaggagtttaaggagggagtagggatgtagcttacagaggctgtccccaccgatcctcccacaagtgatattgttctgtaacatggtgaatatataacctatacaaatttaaactatggtccatatttatcttttataaaattgaatatcatgtacctccgtcattcttgtaagaaacttttgttttgtttttgttttttttttggcataacaacagattcaaagagaaaggccaataacattattttaagctagtctttttcctgataaagttgattagtagtaacttgataaaactacaactgcagccacacatacctctacattgatttagctattgatataacattaaaaataaaatgctgcaaccattcaaaataatgttgatcgttccctaaagagggggtttctgttttttgtgattatggaaaaaccatgtatgtcactataacagatcaagcaccaataccggctgtataacacaataactttcatttaacagtgccatatttatttcatcataatgggtatgtctgacctacaaaggagaacaattcagctgtaaagcattacaaatttacaattgacttttccttttattaactgtgcttgtaagttattctgaattctgattaatcattttgtaagttgattattcttcattatgtgctatctatacttctgtttgtttatgtgtttgtgttatccttcaatttagcactctcaaactgtatgaattgtctttttttgtttcactccctataggatggttttcatggaaggaaatccaccaaattgaaaagcaagcattgccttcgttttttgatgggatatctttacggaggacacctgagatatatttgggaattagaaattttattatgaagaaatttcattctaatcctcaaatgcatttggagttgaaggatttgtctgagttgtcagatggggagatggatgctcagttgaaagtcttggagttcttgtcacactggggtttgatcaatttccacccttttccaccagctgtacagggggtgagtgagctggttgagagcataacaaatgctgatacagaagagaaaatttctgtagtggataaattatttcagtttgaaacattgcagtcatatctcattcctgctcctaaccaagcagaggtgacagctccgattcacaccccgagcttgctttctgagcctactctaactgaagattcgattacccaagctgagtcttctgttgagtaccactgcaactcttgctcagttgattgctcaaggaagcgctaccattgcagaactcaggttagttcattatgatgaaaagttcattatatctcatcgcttgaacaaaaagaattacctcgcttcattaatcgttctgctctattattttgagtttttgaccatggatgtttcataatctcatagtcaagtaactgagatgtgggttgttcatagcgttcttttttaatattgggtgttattttcaagaagataggtactcataaacccctgataaatgttgtgtgtggttgcctatgcatctctctgttatgctcttatgtagcaatcgaactggttgatttagcagacttaagtatcttttgtagaataggtctatagagctgcagtagaataacttctgtgaacctgtgtaggttcttatcatctttagctgttttttactaacatgaataatggattacagagcatcctgttacaccttatccttgtgcatagacagtaaattgggagcattgtacaaaaaaagaagaataaatccatttacaacactctactatttgtctattacctgactctagaaaataaccatcaactgcaaatccatttgattcacatcccttggcctgatcccacccggtttcttgcttaggtagcttcatggtaaggtcaatatggagctgatggtagaagggaagggactgctaggtggcagctatgcttcccttcttgcccttgcatttccactatctgggttgctatctcaagcctggtagataggtggttaaaccatagaaggtggcatcaaggactagaggggcttgatgggatgggtttaattgtaaatttacatatttgttgcgaatagatacttgtacaatttaatcaagtaccatatttacgcaattcttgctgggcagtggtgcttgcattaatcccatacaaaaaaattttctggctaattgcctcgattatcattccctgtatctgctattgtcatgtgcagcccattagggcccatatagaagcagcacccctaccattgtagggctgatgatacttctatggttttttttttcttcttctttttacctaacaaaagtactgaagtatagttctgaggtctgatgagttatttagctgaatgctgattgttttctcttaaacctttccaggcagactttgacttgtgttgtgactgttatgacaaaggaaatttggatgcaggcatgtcacaaactgatttcatcattatggaatctgcagaaattccaggctttggtggtactagctggactgaccaggagaccttgcttcttttggaagctttagaaattttccaagcaaaatggggtgacattgccgagcatgttgctacaaaaagcaaagcacaatgcatgctacacttccttaaaatgccaattatggacccatttctgcatgatggagatgttaatgaaatatctcaggaaactgcagagcaggtctcagcagaacaaggtacttctcgtgtaactgagaaaatggaagtagaagacaaaacaaaagaaataaaaactaatgatagaaaaactgctgcaaaaccaaaattgaacttgacagaaacagaagtaaacctagacgacaatgttgttgcaaataatgataccaagagttcaggtgatatcaatgtggatgtatgtagcaatactggtgtatcaaatagatcttcagataccgaacctacaaagaaggaaacttctggggaaaacacatcaaacattgttaatgatgtcctgaaatatgcttttgaggctgttggtcacattccaaagatagagggcttgggttcatttactgaagcaggaaatcctgtcatggcactggtaaatacattcttctggcttttatcaattttcacttatgaagttcaatgcaggaatgccctttgatgtttttttaaaaaataagtgcaggtggcatttctatctggccttgtggatcatgacgatgttactacgttgtgctgtagttcactgaaagctatatctgatatgtctcctgctcttcaactggcaacaatgcattgttttattcttcaggatccaccaaatgacctcaaagatccaccggtcagtataaggtaatgttgatcataccatgagtcttgcttagaatagagttgctattgcaaatctcactgattgggaaattggaacttgtagctttgcaaacacagattgtgggcaacaaaaagacaaggatgctacttcaaatccaagtgttactgacaatgatgacaatttaaaagaagagtctgctttatctgtggaagagccaaataccacatccacatcatcgaaaaacaccaggaaattatctaatgcgaaggaatctaaggatgaatctccccaagtggagcccaaacccagtagtgccaacgattgtgacaatccaatttctcaggtggcaaagagggcttctgataatataagaggacacagttccactgtgcttcctgtcagtctgaataatacaaatgaaccttgttccatatcttcccaagaggctagtgcaggaaacacaaaggatacaagtcatacagaacacatagaaggagataaaccaatttatgaggatccaccattagaaggaaaggtagagttgaacaagatcgaacatgaagtcactgacttatctgctgtacagcaacatgagtccatccaaacaagtttgaagaagggctacatacaaggtaacttgtttagcttctgtcttcaatgttttgtaaagacccatcaaggattagccttggcttccaggcatggttacaaatctatccatatagaaatatactaattggcattccaaggaaattctcgtattaatcagataaacagtgaattaagtctgtcgatccatctaggtggaccgaattgtaacgccttagattaaatacaacataccaattattgatttcgaaatctggaattaaattaacaagatactaaattgagagtccaagacggatacagcttcaaatttattaatgctggattttaaaattgtttaaagaaaaatccaagctgcatgggttatcgactatttactgttattttttttgttcaaatatcaccagatttcctggactcaaccaggactaggaaagactatctgatattagttaatgtgatacactattttgagtgatgttggacactggtgatcatccacggtggaggatacaaataacatggacttcataaaattaaaaagcatccaaaacatcttgttctttttgttcctgattccggtgtagcatacttatcagattttttgcatgttcacaatttctcaattattaaaaagtttggcatgtaagaaatactgctgagccttctgcttctttattatgtctgccttgtctggatgtgtagtttcctttgatttttgttttcatgtgccatggagataacttcccatatttgtcgctttacagatcataacagtattaagaaaacagttgccgatgatgtctccgtacaaaggctacagcgggcagcagccagtgctatttcagcagctgctgtgaagtcgaaactccttgcaaagcatgaggaatatcaaatccagcgactagctgcacttgtgattgataaacaggtattttataaccaatgactacagtaatgcttcaatacatacaagtagcatatacttcctgtgagatgcatgtatatatgaccataaagtatgcattacctctgttttttccctcatctaatgaagatcacattccgtgcagctccacaagatgcaagcgaaaatgtcagttttcactgaagcagataatttggtcctgcgagcgagagaacacaccgagagaactcggaagaagcttctgatggagaggagcgcgataatcgcttctcggatggcggcattgccacccagaccaaaccaccaacctgggatgcctgggagcagattgccggtagggtatggtgtgaatcagcatctgaggcgatcttgaggcctacttcgcacgtgctgatgacctaatgtccaccttccaagaaggatagatatagactgtagggctggcttttgtagttgtgctaatccagtaatccaccatgaccatgtgcaatatcccatgttagtatgttacaggcttaatattttgaagcgtaatattattgcctcacctagcttttagttacccctggtagtgtagaactgctgtcacctggaatgtagtatgtattataatggtttcaagatctaggttttggtgctcctg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0110300, RefSeq:Os04g0110300