Os04g0120300

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Revision as of 10:57, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0120300| Description = Peptidase S8 and S53, subtilisin, kexin, sedolisin domain containing protein| Version = NM_001186813.1 GI:297722756 G...")
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Gene Name

Os04g0120300

Description

Peptidase S8 and S53, subtilisin, kexin, sedolisin domain containing protein

Version

NM_001186813.1 GI:297722756 GeneID:9268570

Length

6371 bp

Definition

Oryza sativa Japonica Group Os04g0120300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:1202189..1208559

Sequence Coding Region

1202189..1202195,1202863..1203476,1203588..1203658,1203760..1203999,1204406..1204532
,1205040..1205232,1205603..1206123,1207864..1207924,1208300..1208559

Expression

GEO Profiles:Os04g0120300

Genome Context

<gbrowseImage1> name=NC_008397:1202189..1208559 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:1202189..1208559 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatttgtatcacacctgagtcaccaagcttcgctgatgatggatatggaccccctccatccaaatggaaaggagtttgccaagtcggcccttcgttcaaagcaaaaagctgcaaccgaaaacttatcggtgcacggtggtacatcgatgatgatactttaagaagcatgagcaaggatgaaatcctatctcccagggatgtggttggccatggaacacacacggcttcgacggccggtggtaacatcatccacaatgctagcattcttgggctagcagctgggacagttcggggtggcgcgccccgtgcacgagtagccatgtacaagacatgttggaatggtgttggctgctccgccgccggtcagttgaaggccatagatgacgctatccacgatggcgttgatatattatcactttctcttggtggcccttttgaagatccaggcaccttgcacgttgttgctaagggtatccctgttgtatactctgctgggaatgatggacccattgctcagacagtggagaactcatcaccgtggctgcttacagttgctgcggccactatggatcggtcattccctgtggttatcacattgggaaataatgacaagtttgtggcacagtcctttgccatttcagggaaaacttcaagtcagttcggtgagatacaattttacgagcgtgaggatgctgagaatatccacaacacagtgaaggggaagatcgtcttctgcttctttggaacgaagttcgattcggagcgagattactataacatcaccaaggcaacgagtgagaaaggaggaataggggtgatcttgcctaagtacaacaccgacacactactgggggacaccctcctcactttgcctattcccttggtcgcagttgattatgagatcacctacaggatataccaatatatcaaagaaaacgatggcaccccaaaagtgaagatatcattaacccaaacaactattggaaaagtttctgctcccaaagtagcagctttctcgtcgagggggcccagttatatttatcctggggttctcaagcccgacattgctgcaccaggtgttacggttttggcagctgcaccaaaggcttttatggatgcaggaatcccgtaccgtttcgactctggaacatctatgtcttgcccccatgtgagtgggatcattgcggtactcaagtctttgcatcctcaatggtcaccagctgccctcaagtctgcaatcatgactacagcacttacctatgacaataacgggatgccgatacaagctaatggaaaagttccaaagattgccgatcctttcgattatggagcaggggttgttaatccaaacatggcagctgatccaggcctcatatacgacatcgaaccatcagattacttcaagttcttcaactgcatgggaggattaggctcagcggacaattgcaccacagtgaaaggatcacttgctgatttgaacctcccgtccatcgccatccccaacctcaggacattccaggccacaacgcgcaccgtcaccaatgttggccaggccaatgccaggtacaaggcgttcctctacacccctgccggtgtcgagatgaccgtcgatccgccagtgctagtgttcagcaaagagaagaaggtgcaaagtttcaaggtgaccatcaaggcgacggggaggccaattcagggggactatagctttggaagcttggtgtggcacgatggcggcatacactgggttcggatcccaattgcagttcgcatcacggacattgatgcaccacgggtttcagttatagccactgctcagacttcttatgacaatgcaactacctatgacaacaacaggatgccagtacgaaacatcccaaaggttgccgaccctttcgattatggagcaggttttattaatccaaacatggcagctgatctagggctcatctatgacatcgctgcatctaactatctcaagttcttcaactgcatcggaggattagccacaggggacaactgcacaacggcgaaaagatcacttgctgacctaaacctcccgtccattgccatccccaacctcaagacgttctag</cdnaseq>

Protein Sequence

<aaseq>MICITPESPSFADDGYGPPPSKWKGVCQVGPSFKAKSCNRKLIG ARWYIDDDTLRSMSKDEILSPRDVVGHGTHTASTAGGNIIHNASILGLAAGTVRGGAP RARVAMYKTCWNGVGCSAAGQLKAIDDAIHDGVDILSLSLGGPFEDPGTLHVVAKGIP VVYSAGNDGPIAQTVENSSPWLLTVAAATMDRSFPVVITLGNNDKFVAQSFAISGKTS SQFGEIQFYEREDAENIHNTVKGKIVFCFFGTKFDSERDYYNITKATSEKGGIGVILP KYNTDTLLGDTLLTLPIPLVAVDYEITYRIYQYIKENDGTPKVKISLTQTTIGKVSAP KVAAFSSRGPSYIYPGVLKPDIAAPGVTVLAAAPKAFMDAGIPYRFDSGTSMSCPHVS GIIAVLKSLHPQWSPAALKSAIMTTALTYDNNGMPIQANGKVPKIADPFDYGAGVVNP NMAADPGLIYDIEPSDYFKFFNCMGGLGSADNCTTVKGSLADLNLPSIAIPNLRTFQA TTRTVTNVGQANARYKAFLYTPAGVEMTVDPPVLVFSKEKKVQSFKVTIKATGRPIQG DYSFGSLVWHDGGIHWVRIPIAVRITDIDAPRVSVIATAQTSYDNATTYDNNRMPVRN IPKVADPFDYGAGFINPNMAADLGLIYDIAASNYLKFFNCIGGLATGDNCTTAKRSLA DLNLPSIAIPNLKTF</aaseq>

Gene Sequence

<dnaseqindica>1..7#675..1288#1400..1470#1572..1811#2218..2344#2852..3044#3415..3935#5676..5736#6112..6371#atgatttgtcctgtatggcacataagagttgtgtgcacatgtttagtaccacattgctagtttagtaagggtggaaccaatttataagatcttgtccttctaactataccacttccgggttaaccattttgcttgaagcgactcccgggttcaccatcttatacggagcgtggacgtaaatgtaagtgaaatggtatgtataagtgggtcctcccgtaggatggattgagctatgtggttctggagtgcaagctattacaactgattatctagttttagcaagttttatcttaaataatatttatgtctgaagggagtaattatatatatgttggatcttggatggttgagttgtcagttctgactccattcattgtgtggctacaattttcgtactcactttatgcaaacacaaatgggtcctagtataaagttagaaggttaatagatttatccacaaaccatatgtattagggtattatatcgatagtctatatcatttttattacagaggactcaatagaaaaaacagtagtggtgaagtataagtaattcccagctctacatcatcaccttaatattgctttttcgtgaattggttagcataaataatttaataattgtttgttataaaatatcatttagattttcaattatttgctattatcatgtaggtatcacacctgagtcaccaagcttcgctgatgatggatatggaccccctccatccaaatggaaaggagtttgccaagtcggcccttcgttcaaagcaaaaagctgcaaccgaaaacttatcggtgcacggtggtacatcgatgatgatactttaagaagcatgagcaaggatgaaatcctatctcccagggatgtggttggccatggaacacacacggcttcgacggccggtggtaacatcatccacaatgctagcattcttgggctagcagctgggacagttcggggtggcgcgccccgtgcacgagtagccatgtacaagacatgttggaatggtgttggctgctccgccgccggtcagttgaaggccatagatgacgctatccacgatggcgttgatatattatcactttctcttggtggcccttttgaagatccaggcaccttgcacgttgttgctaagggtatccctgttgtatactctgctgggaatgatggacccattgctcagacagtggagaactcatcaccgtggctgcttacagttgctgcggccactatggatcggtcattccctgtggttatcacattgggaaataatgacaagtttgtggtatatatatttatttactgtgaagttttctatttataacacaatctattatgtgtttagtttattcgttccgacttaaattgatcgttacccgtgtggttatgcttgcaggcacagtcctttgccatttcagggaaaacttcaagtcagttcggtgagatacaattttacgagcgtgaggagtaagtgtgggaaatcaaatatctaaaactgatggtaattaattcatgttttgcttgatagctagcaaggtaattaacataattaattcctgcagctgcagtgctgagaatatccacaacacagtgaaggggaagatcgtcttctgcttctttggaacgaagttcgattcggagcgagattactataacatcaccaaggcaacgagtgagaaaggaggaataggggtgatcttgcctaagtacaacaccgacacactactgggggacaccctcctcactttgcctattcccttggtcgcagttgattatgagatcacctacaggatataccaatatatcaagtaggtaacttatttatgagcagtttattgtacatacacatatattatatcactgtgaatgtccatttgaaaagaggtactaatacccatttctttcctttaatccgatgaattgtatctagttataatatcagctcaactactattagtaatttattttttctactgatagctagtgtgattatgctaaattagtggttgagattacctttgtatgataatactagtagtagaatactacagcagacaacaccagaaagatcctcttccaaaattagagaaagaaacttctgatattattttgctcattaaattgattatatcaccttcttccaactatatattagtttagtttgtcacctcaacaattaatttcctttacttccatccatgctctaattaacagagaaaacgatggcaccccaaaagtgaagatatcattaacccaaacaactattggaaaagtttctgctcccaaagtagcagctttctcgtcgagggggcccagttatatttatcctggggttctcaaggtaaagattttaccttgaccgacaacaagaggttctacgttcaaattaagacacataaatgcatacttgtttttcatgaatatcaaaattgtctgaatcatatacattatgttcatttatagctagcaatatttaagttaggagagaaggcaaaataatacaaaggtgtaacataggcaccacatatctttgcttatcaaaataactttctaaattctaacagcattatattatcttgaaaaggctggctgcagcaagatcactatttgtagttcagctcaattaattaaaatataaataatgtaaaataagctacaattttattgctcttagcagctataatatatttgctaggaattgaataaataacgtagtgtaggtatcataatcagaactattatttgttattttgaccaagttgattctatcaatgttttatatgttttcccactagtcaacttagcattccgttatcataacatgtcgtgatgttctctcatattgcagcccgacattgctgcaccaggtgttacggttttggcagctgcaccaaaggcttttatggatgcaggaatcccgtaccgtttcgactctggaacatctatgtcttgcccccatgtgagtgggatcattgcggtactcaagtctttgcatcctcaatggtcaccagctgccctcaagtctgcaatcatgactacaggtaactatttttcttttcatagaaagtaggttaaaacaagttttacgattatactttgtttcatatgaaccttattaattatgggcattatttatttttgatggggtggggaacttaatttcattgatatcaatactagaaaaaaaaagcacatttagactgcattaacttcattactggtgaactttcctaaccaagcctgaagatgctatccaagagagaccaacacatgctaacgagttcaccactaagttttgctctctaatttctttttgcattcgaacaggccacccgtcaagcaaatatctgtatttgatgtatagattgagttagtaacgttctgatcaatattacatttcttcacaagcagcacttacctatgacaataacgggatgccgatacaagctaatggaaaagttccaaagattgccgatcctttcgattatggagcaggggttgttaatccaaacatggcagctgatccaggcctcatatacgacatcgaaccatcagattacttcaagttcttcaactgcatgggaggattaggctcagcggacaattgcaccacagtgaaaggatcacttgctgatttgaacctcccgtccatcgccatccccaacctcaggacattccaggccacaacgcgcaccgtcaccaatgttggccaggccaatgccaggtacaaggcgttcctctacacccctgccggtgtcgagatgaccgtcgatccgccagtgctagtgttcagcaaagagaagaaggtgcaaagtttcaaggtgaccatcaaggcgacggggaggccaattcagggggactatagctttggaagcttggtgtggcacgatggcggcatacactgggttcggatcccaattgcagttcgcatcgtgattgaagagatctactccaagatctcctaacttgattgagatatgctactgctacatatgacaatgctagttgattaatgatcgacttgtactgtatacataaaggatgaacccatatgctttggatgtactaccatgttatatgtatatggaatgtagccccaggaagtatttcttatgtaaaattatgttagatgtttgttatgaataacagggtttcgacttgtgactaaagacatggcgacaacttattatttatatgtatgagaaatattaataaaatataaaaaaaatcataaatggcaatctgccctattgttctgtgctgaatttggatattttttataatataactattactttcgctgcctacaccatgtaggatgttttttttaaataatttgagttattttattgctacgtatgggtatatatgaatcaaattgttacacctaggtatataactagaggttgaaaattttcaaaaatttgagtgtgattagttattatcaaaccatgaagtctagtctccatgaagggccacgtggctgttttatatataaataataaatatagcaataatagtaattgttcttgtaaagtatggccagaggcggagaaggaagaaaatatttttgttcaaggttaaggcaagaacatgagagaccataggagaaagattgaatccaagagcaaacacttgcaacttcgttcggggcaaggagagcaatggataggggggggggggataatatcaaagaaatagtgaaggggaagattgtcttctgctttgttggaaaggatttcaatcactttcgatgttagaaatggccttaacgaaagtcatcttgccatagctgatcgattgctccaagatgaccccatcataactgctctggatattttcattgtccctattaactatgagatcgcccaaaagattgtcaaatacaccaattattattattattgttgtcgtcgtcgtcgtcgtcatcatcatcatcaagttttatgcaagtatccacacatcaagtttttatgtccaccgccaccaccaaactaccatgagagacatgtatcgtctacaccaaatgtgggtgtgtcttatcacacatctacaccagagattaaggctcctgtagcgtggcaacacactttgaccactccatgtgttgaggacttgatactggattggcatgttctgttgtaacgaccacaactaatatgtatattatatttagttcaccaactatacatatatgttggagtcttggccttacacacacacacgcacactattctagctattcagttttcacactccaaaagttgcctttcgttacttgcaacccacatcttaccaacccttttttccaacacaacaacagtgaaagtggtagttacgtcccaaaagcgaagatatccttaacccaatctacaattgaaggtgaaatttctgctccaaaagtcacagctttctcattgtgggggtgtagttctatttatcctggtgttgtcaaggtaaggtcaattttgctatgatatgtactattttttttcatatggaaattttaagccattatggtatgagagcttttagagcaacctacatttagtataaagaaagaaaaaaagacagattttgaacaatcttcaactagttgatttcaatcatttattgtttgttttccttggccaacattcagataccataatattaatcttccaaattggtagacggacattgatgcaccacgggtttcagttatagccactgctcagacttcttatgacaatggtaccccctaccacatcagtcctggaacatccatgtctttctctcatgtataagtgggatcattgctgtgctcaaatccctgcatcctcaatggtcacctgccgccctcaaatccactatgatgataacaggtaacttattatttttgtaacataaaacatgtgtctggaacattgagattttagtgatgttcatgcatttattgttaggcctccatcttttaaacttgtactataagaggatgtagatacaaatgtgtacggtgaacatgtgtcgatctttcatgtaataaaaaaattggggccttacttgatcgatatcattggatgcataggatcgataacaatctttttccttatatttctctgcatatagcaactacctatgacaacaacaggatgccagtacgaaacatcccaaaggttgccgaccctttcgattatggagcaggttttattaatccaaacatggcagctgatctagggctcatctatgacatcgctgcatctaactatctcaagttcttcaactgcatcggaggattagccacaggggacaactgcacaacggcgaaaagatcacttgctgacctaaacctcccgtccattgccatccccaacctcaagacgttctag</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0120300, RefSeq:Os04g0120300