Os04g0177300
| Gene Name |
Os04g0177300 |
|---|---|
| Description |
DEAD/DEAH box helicase, N-terminal domain containing protein |
| Version |
NM_001058703.1 GI:115457135 GeneID:4335086 |
| Length |
6203 bp |
| Definition |
Oryza sativa Japonica Group Os04g0177300, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:5246808..5253010 |
| Sequence Coding Region |
5247120..5247242,5247333..5247431,5247542..5247613,5247714..5248287,5248371..5248483 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:5246808..5253010 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:5246808..5253010 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>cttggagagcccccaagcactcttgtctccgttctaaaaccataccagaaggaagctctgttctggatgtctcaattggagaagggtattgatggtgatcaagccaaaaaaacccttcatccctgttggagtgcctacaaaatcgtcgacaagagagctcctgcagtgtatgtcaatgttttcactggcgaggcaacaacccagtttcaaagtgtaactcagtcagcaagaggagggatactagcggatgcaatgggtcttggtaaaactgtcatgactattgctctaatactatcaaacccaaggggggagttagaacaagataagaggggtactagagatcgtgacaccaaggcacaaacttcgagatcctctgtaagaggaggcacacttataatctgtccaatggcattgctaggccagtggaaggatgaattggaggcacattcaacaccaggagctctttctgtgtttgtctactatggtggcgacagaaccactgacctgagattcatggctcagcatagtgttgtcttgacaacctatggtgttcttcaatcagctcacaagaatgatggcagcagtatctttcacaggatagattggtatagagttgtgctcgatgaagcacatacgatcaaatctcccagaaccaaagcagcacgagcagcttatgaattaacttctcattgcagatggtgccttacgggtacaccattgcagaataatttggaggaccttttcagtcttctttgcttcctacatgtagaaccatggggtgacgcaagttggtggaataagctgattcaaagaccttatgagaatggtgatgagaggggattgaaacttgtcagagctattctgaggccactcatgctgaggagaacgaaggaaacaaaagacaaaatgggaaatcccatactagtcctcccaccagctaatattgagattgtggagtgcgaacaatctgaagatgaacgcgatttctatgaagcgcttttcaggagatcaaaggttcaatttgataaatttgtagcacaaggcagtgttcttaacaactacgctaatattcttgagttactccttcggctaaggcagtgctgcgaccacccttttctagtgatcagtcgagctgatactcagaagtatactgacctcgatgagctagcacagaggttccttgatggggtgcaacgtgattccgcgagacgcagtgcgccaccttcacaggcgtatgtagaagaggttgttgaagaaatccgccagggcgcaactactgagtgtccaatctgccttgaatcagcttctgatgatccagtgctcacaccatgcgcgcaccggatgtgccgtgagtgcctgctctctagctggaggacgccttctggaggaccatgcccactttgccgaagccccattaccaaatctgagctgatcacattgcctagtcagtgtcgattccaggttgaccctgagaataactggaaggactcatgtaaggtgataaaactcatcaagatcctggagggccttcaggagaagagggagaagagcattgtgttcagtcagttcacttccttcttcgatcttcttgaggttcccttcaatcagaaagggatcaaattcttgaggtttgatgggaagctcagccagaaacacagagaaaaggttctgaaggagttcagtgaaagcaaggacaagctggtgctacttatgtcactcaaggctggaggtgttggacttaatttgactgctgcctccaatgtgttcctaatggacccatggtggaatcctgcagtggaagaacaagctatcatgcgaattcaccgtatcgggcaaaagagagcggtccaagtaaggcgcttcatcgtcaaggatacggtcgaggagcggatgcagaaggtgcaagcgtgcaagcagaggatgatctctggggcgctgaccgacgatgaagtccgctccgctcgtatcgagcaactgaagatgctgtttacatga</cdnaseq> |
| Protein Sequence |
<aaseq>LGEPPSTLVSVLKPYQKEALFWMSQLEKGIDGDQAKKTLHPCWS AYKIVDKRAPAVYVNVFTGEATTQFQSVTQSARGGILADAMGLGKTVMTIALILSNPR GELEQDKRGTRDRDTKAQTSRSSVRGGTLIICPMALLGQWKDELEAHSTPGALSVFVY YGGDRTTDLRFMAQHSVVLTTYGVLQSAHKNDGSSIFHRIDWYRVVLDEAHTIKSPRT KAARAAYELTSHCRWCLTGTPLQNNLEDLFSLLCFLHVEPWGDASWWNKLIQRPYENG DERGLKLVRAILRPLMLRRTKETKDKMGNPILVLPPANIEIVECEQSEDERDFYEALF RRSKVQFDKFVAQGSVLNNYANILELLLRLRQCCDHPFLVISRADTQKYTDLDELAQR FLDGVQRDSARRSAPPSQAYVEEVVEEIRQGATTECPICLESASDDPVLTPCAHRMCR ECLLSSWRTPSGGPCPLCRSPITKSELITLPSQCRFQVDPENNWKDSCKVIKLIKILE GLQEKREKSIVFSQFTSFFDLLEVPFNQKGIKFLRFDGKLSQKHREKVLKEFSESKDK LVLLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRAVQVRRFIVK DTVEERMQKVQACKQRMISGALTDDEVRSARIEQLKMLFT</aaseq> |
| Gene Sequence |
<dnaseqindica>5769..5891#5580..5678#5398..5469#4724..5297#4528..4640#4274..4373#4034..4156#3880..3947#3605..3754#3357..3500#2927..3118#2421..2505#2179..2323#2071..2077#tttctccatccccaatcctctcctcctcctcctccgcctccgcctcaatcccttcctccatccacccgcctccgttgttctcgccggcggcgacgacatgcacggcgactggccggagtcgccgtcccaggaggtgctctacgccgacgagatcgccgccgtccgcgcggttcttggcgcgggcctccccgaggcccgcgtcgtcgccgcaatctcccgctgcggaggcaacgccgagcgcgccatcaacgcgctcctcgatgacgccaccgccggcgtcgaggacaaacccgagcccaagaagggtaaaggtgccaagacggctgctcctccggtgaaggcggaacgcgacgctggtggcgccgccccgaagccgccgccgcctccggtgaaggttgaggtcctcgacgacgagcccctggggagccaagaatcgaacggctgctccgcgagggtcaagaaggagcgggaggacgagctgctcgtcaaagcgccgcctccgatgccggatcgggtcaaggaggaagacggcgtcgcggccaagcgaggcgcggcgacggcgaacgccgccggcataagcctggtgccgaggccgaagaagaggtctcgcgtgcacgacgaggcggacaccatcgacctcacggcgacccacccggtgccgtacctgaacccgaggccgatccgggcggtgccgccaccggaggccatggagatgctcgagtcgcggcgtgtgcgtgccaggccgcctccgccgtcgagtgatctgaggatggtggtggcgccgcctgatgccgagttcggcgagttccccgaggagcgcgactggttcctcgtcggcaggtcgtacgtcaccggcctgtccaccaaccgcgggaggcggaggctggacgccggcgagctcgtccatttctcgttcccctcattggagaggacctatggtgggatcaaggtgtcgaacaagaaggcggctgctttggcggagatcgtgcgcttctccaccaatcgagctggagaggtttgctgctcttgtgatgctatcatttcatttctaataatgttgttggtaatggttgatttatttgtgagaaattgtattaatttctgttatttttcattgttattgtagattgggaagctatctacagaatggaccaagtgcctcgtgccactggtaagctcatccaaggtgaagattcaggggaagattgtgtttcccacggtggaattgagattgatgcaggagattttgttgtatgttaggtaatggttgattatgcatgtttgcttttcttcttttttttagtttgtgtattgtgtcattgtgatgatttgtgttaaattgttgatggtaatgttttttttttttccttttctgcagcttctacatccaccgttctgtattcaccgcaagcggcaacaactcatcatgggacctgcttgctcctgcaaatgttgattattccactaaccctctttacaggctgttcagattgctcaagctaagggcattcaccaaggtagcactcatgtcaattccctgaaactcttcagttcttgtagtgctcttgatcctgatgattgtatatgctaatgcttgtgtcatgggcaggctgatatcactcctgaggagcttgctgcaggaaagagaccgcggaatctaagggtgagcttcaatttctcttgccaatcgtgaactgtgattatttgttcaatcgtatgtctctgtagcatgtagtacagaagagcaagcctttgattaaatatacttaattgattgctaaaacaaaatgtacttcgttgtggcattgatctaaattactttatgaattgttaccgtgataatttctgctagcatgtaatatctttttccgagttatgtgctttttgttgatctttttgttttggatacatgaactagggtgatgacaatgatgaagatgaacccatggctatagttggattggaaaaccgacgcacagctggccaaacatttcctgagcaaggcactgatgagcaagctatttcagaggctgcattaaacaaaattgttggcactgctgaaacatatgacttggaggtaagaacaagacctctatttgattgccactctgcactatcggaatgtttgtatatgaacaatgttatgattttaaacaatctgtggaatacaggaagcagagcccccaagcactcttgtctccgttctaaaaccataccagaaggaagctctgttctggatgtctcaattggagaagggtattgatggtgatcaagccaaaaaaacccttcatccctgttggagtgcctacaaaatcgtcgacaagtatgttccttcagtttcatttgcatagttgcatcgaaatgttaattaggaaaatgtccagaactaaatattcacaagttgtaatgtttgtttccaggagagctcctgcagtgtatgtcaatgttttcactggcgaggcaacaacccagtttcaaagtgtaactcagtcagcaagaggaggggtaagtttgttttgttttaagggtcactcgtatacgcattgtaccttgtttaggctgtacatagacagtattatttttttaatgacaattctagatggtagtgttctgctttccctgatttgttttgtagtctcattagattgcccaatgcagcattatatgcttttttaatattaccactagaactttaatataaacaaatgaaatggttgcttttgcatgcttgatgaacactgcaatggttgctggggtttacaaactttgaagaaatggttgcttttgcaatgctttctcactttccgcacttttttctgaggaagttgtatatatgcatgtttttcaggggaaatttttgttagaatatgaatatttgcatctgcctaatctgatggtgctatatgtgtcatctcttgctttgcagatactagcggatgcaatgggtcttggtaaaactgtcatgactattgctctaatactatcaaacccaaggggggagttagaacaagataagaggggtactagagatcgtgacaccaaggcacaaacttcgagatcctctgtaagaggaggcacacttataatctgtccaatggcattgctaggccagtggaaggtaagaaattatatctatgcttaccattatattgtacttttccggttttatagttgtattttattttgcttgctttcaacttgagaacaattgaaaggggaaccttttaggtttgtctttcttttgtcttcattttttccagccttgcattttcaagcagcttgtttgatcctttttctagtttctgctaggaacttttgatttgcaagactagtaatgtgatcattgccctttgcaggatgaattggaggcacattcaacaccaggagctctttctgtgtttgtctactatggtggcgacagaaccactgacctgagattcatggctcagcatagtgttgtcttgacaacctatggtgttcttcaatcagctcacaagaatgtaagagtttggactgtggccttctctacagtgtaatggtcatagctttttttgcaagaagtggtcattatattttaactaacgaaaaatggtactatttacaggatggcagcagtatctttcacaggatagattggtatagagttgtgctcgatgaagcacatacgatcaaatctcccagaaccaaagcagcacgagcagcttatgaattaacttctcattgcagatggtgccttacgggtacaccattgcaggtgagtttgcaaccattgccatttgttattttaatacttcctgttgaactgccagaatttgaagcattgatgaatagttttgtagtttctagtaagctaacttatccgtatcacatttgctgcagaataatttggaggaccttttcagtcttctttgcttcctacatgtagaaccatggggtgacgcaagttggtacgaacattttctggctacataaaatctaatccgatgtgttattgggattgaaaatctgactcaagctgttttgatttcaaaaggtggaataagctgattcaaagaccttatgagaatggtgatgagaggggattgaaacttgtcagagctattctgaggccactcatgctgaggagaacgaaggaaacaaaagacaaaatgggaaagtacgcattttattattttgttactttgtcaacacaataaactgcatcaattatcatctgccatgccttagctcttggaagtactgttgctcacaacaattaaatgcttgtttccagtcccatactagtcctcccaccagctaatattgagattgtggagtgcgaacaatctgaagatgaacgcgatttctatgaagcgcttttcaggagatcaaaggtatctttgttttaaattttcttgttcaggactttgggttaatataagaaattggaaccttcactgaattgttctttggaccattgttcccatagttcttaatgttcatggctgagatttgtttttgtctaacacaaaatggtactcccaacaggttcaatttgataaatttgtagcacaaggcagtgttcttaacaactacgctaatattcttgagttactccttcggctaaggcagtgctgcgaccacccttttctagtgatcaggttagacatggattgcaaagaaatatgctcccttacattttcatcatgtcatttctaactcctgttaaattctaaatatgcagtcgagctgatactcagaagtatactgacctcgatgagctagcacagaggttccttgatggggtgcaacgtgattccgcgagacgcagtgcgccaccttcacaggcgtatgtagaagaggttgttgaagaaatccgccagggcgcaactactgagtgtccaatctgccttgaatcagcttctgatgatccagtgctcacaccatgcgcgcaccggatgtgccgtgagtgcctgctctctagctggaggacgccttctggaggaccatgcccactttgccgaagccccattaccaaatctgagctgatcacattgcctagtcagtgtcgattccaggttgaccctgagaataactggaaggactcatgtaaggtgataaaactcatcaagatcctggagggccttcaggagaagagggagaagagcattgtgttcagtcagttcacttccttcttcgatcttcttgaggttcccttcaatcagaaagggatcaaattcttgaggtttgatgggaagctcagccagaaacacagagaaaaggttctgaaggagttcagtgaaagcaaggacaagctggtatgcacatacatttctagttgtactcttgctttactttctgcaacgtttgattcttgaagcatcacatattctgaaaatcctttttcctgaaaattaggtgctacttatgtcactcaaggctggaggtgttggacttaatttgactgctgcctccaatgtgttcctaatggtaattgaactatacactgtcaatccaatgacctgcaaatacttattcttgcaccaactttctaacctaaatggtcacatcaacttttttttttttttgcattcatataggacccatggtggaatcctgcagtggaagaacaagctatcatgcgaattcaccgtatcgggcaaaagagagcggtccaagtaaggcgcttcatcgtcaaggtaaggacattgacaatcccagtcacaacatctgctcacttttgccagaaagcacagcaaaaataaaaacacattctgtctggattccaggatacggtcgaggagcggatgcagaaggtgcaagcgtgcaagcagaggatgatctctggggcgctgaccgacgatgaagtccgctccgctcgtatcgagcaactgaagatgctgtttacatgagaagtcttgatcatgagtttgcaggatgttgtacagttcatattttgttccctggagacttgctagcattttaggggaaatgatccaatgttttaagggttcggacttgtgaatggggatggaatgggtgtgaaactatgtgcccattcgattttgtggatatatctccattctggtctgaacattttgtatatagtggctcttcttaacatgaaaggcctctaccctttctaaatcgtgatctattgtgctgaaatggctgttggtgttaaccagggagtaaaaaatctctactgaggcttcctttcatcc</dnaseqindica> 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| External Link(s) |
