Os04g0190500

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Revision as of 10:59, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0190500| Description = Protein of unknown function DUF1165 family protein| Version = NM_001186849.1 GI:297722828 GeneID:9269279| Length = 2...")
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Gene Name

Os04g0190500

Description

Protein of unknown function DUF1165 family protein

Version

NM_001186849.1 GI:297722828 GeneID:9269279

Length

2273 bp

Definition

Oryza sativa Japonica Group Os04g0190500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:6154428..6156700

Sequence Coding Region

6154428..6154997,6155211..6155324,6155608..6155675,6155870..6155948,6156029..6156700

Expression

GEO Profiles:Os04g0190500

Genome Context

<gbrowseImage1> name=NC_008397:6154428..6156700 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:6154428..6156700 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggttcgtcaatcggccatctataacagaaactgaattcccaagattagagccgactgtcaacgatgacggagaagaactcactcatcggagatgcacatcatatggagagtacgcctctacaccaactgatgcaggagcaaaactatcggctgagctgctcaaagactggttttgcaacttttatgaggggttccaaaaggatgctcgagtttggtttctctatggagactcaacacttctggaaaatccatgggacttcagatttgaagacatcaacaatgacagatatcaaaagcccagaaaaatcttcttatctgcaatcaccccatgcatccttccagtcggcattcatcaagggagaaacatccaagtttcctacgagttttatcatccaatgagttctgccagacaatttggaatgggcaacctcctaatcggcttattctttgccgataagatccaatgccgaggagaaatctcatcatctttaatgatggatcggctgctcaatctccaaggacctcctctaggcagcattgacaccacaaagctggcaacctttaggagcaaagcatttgacagatggtggactgaatggaagctacacttattccatcaatcggcttccatgtatatgacagatctctttccagatattcttcctcaaacaacagaatcctctccccctcaccaaagcaacagcggcagggatatcgagtatgccccaggactgatccccaacagagatccatccatcgaaaaagctctggatgaagaaaatattgaggatgatgttgatcaggctgcagccgaacttcctcctcctccttcttcccctgtacaacaatcattgagtgaccgaactccatcggctgtagggagtcatcatattgtggaagaagaacaaccagctgctcctgctatcccagcctcttctctagatagcttagtggtggactgtggatcgattagggcacaattgcacgaagttcaagctctaattcccgaagaactggccgatgtcctaactccagctgcttatcttgagcagcatcaatttaaactggagaaagccaagctaagattatccgaatgccgtgagcacaaggagattgaagccgcaatccaggtcaatcggcagcttgtgcatgaagaaaaagtcaaactcgatcagctatccgaaggtccgatcaaatccaatattgatcggcttgaagcccgcaagatcaatctcttggcacaacttgaagaatgcaatgctgaactagatatggagcacaaaaagctagccgatctcccaaaatctgtagaacagcaaaaagcaaggctcaaatcggctatcaagaatgttgctgacctaaccaagtccctgaaggtcatttctagaactgatgctcaagatgcccaagctattgaagaagtagaacaaattaggcaaagggctattttggctatccagtggtacttgtctcaatatcttttgtgtaataggacttag</cdnaseq>

Protein Sequence

<aaseq>MRFVNRPSITETEFPRLEPTVNDDGEELTHRRCTSYGEYASTPT DAGAKLSAELLKDWFCNFYEGFQKDARVWFLYGDSTLLENPWDFRFEDINNDRYQKPR KIFLSAITPCILPVGIHQGRNIQVSYEFYHPMSSARQFGMGNLLIGLFFADKIQCRGE ISSSLMMDRLLNLQGPPLGSIDTTKLATFRSKAFDRWWTEWKLHLFHQSASMYMTDLF PDILPQTTESSPPHQSNSGRDIEYAPGLIPNRDPSIEKALDEENIEDDVDQAAAELPP PPSSPVQQSLSDRTPSAVGSHHIVEEEQPAAPAIPASSLDSLVVDCGSIRAQLHEVQA LIPEELADVLTPAAYLEQHQFKLEKAKLRLSECREHKEIEAAIQVNRQLVHEEKVKLD QLSEGPIKSNIDRLEARKINLLAQLEECNAELDMEHKKLADLPKSVEQQKARLKSAIK NVADLTKSLKVISRTDAQDAQAIEEVEQIRQRAILAIQWYLSQYLLCNRT</aaseq>

Gene Sequence

<dnaseqindica>1704..2273#1377..1490#1026..1093#753..831#1..672#atgaggttcgtcaatcggccatctataacagaaactgaattcccaagattagagccgactgtcaacgatgacggagaagaactcactcatcggagatgcacatcatatggagagtacgcctctacaccaactgatgcaggagcaaaactatcggctgagctgctcaaagactggttttgcaacttttatgaggggttccaaaaggatgctcgagtttggtttctctatggagactcaacacttctggaaaatccatgggacttcagatttgaagacatcaacaatgacagatatcaaaagcccagaaaaatcttcttatctgcaatcaccccatgcatccttccagtcggcattcatcaagggagaaacatccaagtttcctacgagttttatcatccaatgagttctgccagacaatttggaatgggcaacctcctaatcggcttattctttgccgataagatccaatgccgaggagaaatctcatcatctttaatgatggatcggctgctcaatctccaaggacctcctctaggcagcattgacaccacaaagctggcaacctttaggagcaaagcatttgacagatggtggactgaatggaagctacacttattccatcaatcggcttccatgtatatgacagatctctttccagatattcttcctcaagtaaatcctaactcacttgattttatttgaataactacttggttgattagtccttagctaactttcctcctgatttgcagacaacagaatcctctccccctcaccaaagcaacagcggcagggatatcgagtatgccccaggactgatccccaacagaggtgggccatctccccccgtcatcggctataatgcccccaagactttagctcttctccaagggcttattagagaaccagccgatgccggcaagaaaagaaagaccagatcatcggctgtaaatatttcagccccagctccaagaagaagactaagacaaagaagaccgcaccagctgatgatctgtctgctctagatccatccatcgaaaaagctctggatgaagaaaatattgaggatgatgttgatcaggctgcagccgaagtaagtgatactgaaaaaacaccatcggcttcgcctaagcagatacctccaactccttctgcccccactcacttcttcagagtaaaacatctttccttgcaaaccctttttataattattatttttcagccgactactcataggctttgtgattatagaagaagaaaactgctataaagaaaacatcggcagcaccaattctcaaaccagctccactagtaagacactctcaattttactagtcaattctagccgattttgtctaacacttgtctttttacagcttcctcctcctccttcttcccctgtacaacaatcattgagtgaccgaactccatcggctgtagggagtcatcatattgtggaagaagaacaaccagctgctcctgctatcccagtaagttttcctttgatgcaagaatttagatcggctatattggcttagctctcaaactttctgaacttatacctataggttctagccgatctcttctattttgatatcagagattatcttgatgaggcagaaaaagatacttcaagcaaagctctagctcccttatctgataatgcaaagaaaacactttaagacatctcgcgtcggctagaggcctcttctctagatagcttagtggtggactgtggatcgattagggcacaattgcacgaagttcaagctctaattcccgaagaactggccgatgtcctaactccagctgcttatcttgagcagcatcaatttaaactggagaaagccaagctaagattatccgaatgccgtgagcacaaggagattgaagccgcaatccaggtcaatcggcagcttgtgcatgaagaaaaagtcaaactcgatcagctatccgaaggtccgatcaaatccaatattgatcggcttgaagcccgcaagatcaatctcttggcacaacttgaagaatgcaatgctgaactagatatggagcacaaaaagctagccgatctcccaaaatctgtagaacagcaaaaagcaaggctcaaatcggctatcaagaatgttgctgacctaaccaagtccctgaaggtcatttctagaactgatgctcaagatgcccaagctattgaagaagtagaacaaattaggcaaagggctattttggctatccagtggtacttgtctcaatatcttttgtgtaataggacttag</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0190500, RefSeq:Os04g0190500