Os04g0219600

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Revision as of 11:00, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0219600| Description = Similar to NBS-LRR protein (Fragment)| Version = NM_001058799.1 GI:115457327 GeneID:4335194| Length = 9974 bp| Defi...")
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Gene Name

Os04g0219600

Description

Similar to NBS-LRR protein (Fragment)

Version

NM_001058799.1 GI:115457327 GeneID:4335194

Length

9974 bp

Definition

Oryza sativa Japonica Group Os04g0219600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:7966294..7976267

Sequence Coding Region

7966344..7968449

Expression

GEO Profiles:Os04g0219600

Genome Context

<gbrowseImage1> name=NC_008397:7966294..7976267 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:7966294..7976267 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcagaagcaattattcttgctctatcaaagattaatagtacttttggattggatcccacaaatattgccaaatctgcagtatccaagctatatcagaaaggaaagagtttggcggagttaccggggaaggttgaagaaataagaatggaactaacaacaatggaaaatgtcatagaacaactagatacagcacatctcactgacaaagttatcaagggttggattgcggaggtacgaaagctggcctaccatgttgaggatgtaatggacaaatactcatatcatgctcttcaaatggaggaagaagggttcctgaaaaagtacgttgtcaaaggatcacattatgccattgttttcgatggaattgttgctgagatagtccagattgagcaggaaatccaaagagttataaagctgaaagataaatggctgcaaccatcccagcttatccgtaataaacattctgattttgaaagaaagcggtcacaaggctgcttgccagagctcgtaaaggatgaagatcttgtggggatcgaaggcaacaggatgttattgactggatggttgtactcaaatgaactagatagcacagtgataatagtatctggcatgggtggattaggaaaaactaccattgttgccaatgtgtatgagcgtgggaagatcaggttccatgctcatgcttggattgtcgtgtcacagacctatgacgtagaagaattgctgaggaaggtactcaggaagattggatatgcagatcaagcacacttggatggtatggatgttcatgacttaaaagagaagttcaaagaaaacataagtgatagaaggtgtttgatagtgttggatgatgtctgggatagagaagcatacaaccaaatacatgatgccttccaaaatctccaggcaagccgcatcatcatcactacacggagtaagcatgtggcagcactagctctaccaacacgtcaccttaaactccaacctttggacaaggtcgatgcattcagtctcttctgcagaagggctttttatagcaggaaggactacgattgcccctcagaacttctagagttggctaattcaatcgtcgataggtgtcaaggcctacctctagctatcgtatctattgggagcctgttgtcctcaaagcagccgatacagcatgcttggaagcaaacatacaatcagctacagagcgagctagcaaagagtgatcatgtacaagcaattctgaacctaagctactatgacttaccaggagacctcagtaactgctttttgtattgcagcatgttccctgaggattgccccatgccacgagacaaccttgtacgactttgggttgctgaaggatttgctgcaagaaaagaaaacaacacgccagaagacgtggctgaaggaaatctcaatgaactgatcaaccggaatatgctggaagtggtagagacagatgaacttggtagggttagtacctgtaagatgcatgacattatgcgtgatctagctctttttgtggctaaagatgagagatttggttcagcaaatgattctggcacaatgatgctgatggataatgaagtccgccgcttgtcaatgtgtcgttgggaggacaaaggtgtctataaagctaaatttcctcgccttcgaacattaatatcagttcaaacaatttcatcctcctctaacatgttgtcctcaattttctctgaatccacctacctcactgtccttgagctgcaagattctgaaatcactgaagtgccaacaagtatagggaatctgtttaacctaagatatatcggcttaaggcgcaccaaagtcaagtcatttccagagacaattgagaaactctataatctccacactctagacatcaagcagacaaaaatagagaagctaccacgagggattgtcaaggtcaggaagctacgacaccttttagctgacaaatgtgctgatgagaagcattcagatttccggtacttcactggagttcaacctccgaaagagctatccaacttagaagagttgcagacactcgaaactgtggaagccagcaaagatttggccgagcagctgaagaaacttacgcaactgtga</cdnaseq>

Protein Sequence

<aaseq>MAEAIILALSKINSTFGLDPTNIAKSAVSKLYQKGKSLAELPGK VEEIRMELTTMENVIEQLDTAHLTDKVIKGWIAEVRKLAYHVEDVMDKYSYHALQMEE EGFLKKYVVKGSHYAIVFDGIVAEIVQIEQEIQRVIKLKDKWLQPSQLIRNKHSDFER KRSQGCLPELVKDEDLVGIEGNRMLLTGWLYSNELDSTVIIVSGMGGLGKTTIVANVY ERGKIRFHAHAWIVVSQTYDVEELLRKVLRKIGYADQAHLDGMDVHDLKEKFKENISD RRCLIVLDDVWDREAYNQIHDAFQNLQASRIIITTRSKHVAALALPTRHLKLQPLDKV DAFSLFCRRAFYSRKDYDCPSELLELANSIVDRCQGLPLAIVSIGSLLSSKQPIQHAW KQTYNQLQSELAKSDHVQAILNLSYYDLPGDLSNCFLYCSMFPEDCPMPRDNLVRLWV AEGFAARKENNTPEDVAEGNLNELINRNMLEVVETDELGRVSTCKMHDIMRDLALFVA KDERFGSANDSGTMMLMDNEVRRLSMCRWEDKGVYKAKFPRLRTLISVQTISSSSNML SSIFSESTYLTVLELQDSEITEVPTSIGNLFNLRYIGLRRTKVKSFPETIEKLYNLHT LDIKQTKIEKLPRGIVKVRKLRHLLADKCADEKHSDFRYFTGVQPPKELSNLEELQTL ETVEASKDLAEQLKKLTQL</aaseq>

Gene Sequence

<dnaseqindica>7819..9924#agttcgggtccatattttccttgctaccaacatcaaccggctgttcttccatgcatgagctagtttgagttagctatcttgatctacaactcaaggtaccaattttactactgttttacagcatcatatctacgctagctgaaagaaattttacaaaactgtattgatttcattgttgctgaagtttctgtcattctgtggcaattttgttcccccttgattattccctttcttgaaatttactcatagacctgcaatttttcattcatatttaaaatttcttccaaggcggaaaagactcctgtcggtttccatgtttttttttctgggtagtgcttataacctatactcaccccggtcattaatatattttgcttttaacaccctatgttatgttatagcgtatacttgtcatgcaacactttcacattatagacatgaatgtatgtaccgtatgtagcatttttataaagctagattgaaatatctttgctctaaataataaaacagaataaaaaagaattaggtgtgatatatctagccagtatttgtcaataaaatataggaaaaagtcttaattatccccctcaacctctgacatagtttgttttaccccctcattttcaataccggacgtttcaagtctcaaactttttaaagcagacaaattaccctctaatatatttcgagacattaatggtcctacataattagaggtggatactgagctgactcggctcgggtcggcttagctcggtctagctcgttaggatcggctcagctcgttatcctaacgtgctaaaatcctagctcggctcggctcggttggtagctcgagctagctcgtttagcttgcgagtcaatagacaccagtgactcaacaaaaatcttttgcttcaaagaaaatatcgaagattgtggctgcgaacaatattttttgtaattgcataatagatcaaacaaccgacaaatcacaaagtcttgccacaaaatttttgtacacatcaatttggaatattgcacccatcaacagaaccgagcttatagatctgaaagcttcgttatattggaaccaaacaaaaaaccaagcagacatcctatattcttcctagtgaatcctaggccaaccaaaattaagcagatcaacttgccgaactgacgaactgccgacggcgacgaggacaacaagcttgaacttttgctcttgatttggatctcctggcgccagcagtggagtcgcaagctcctgcagcagggccctgcttgttcgtgctgctgccgctgccgacgaggacggcgtgcttgtgtatttgctccgggactctacacttgccctcctagatggcagacgaggacgcacggcgctaacggcaagcctacgagggggaagagcggcgtcggctcaccaacaaccattctgagataaaaatatatcttcatccctattcctcaccattcaacctgcttttctctcagtgagctcaccaacaaccattctcagcggtgaggttgctggtcaaagaataggaagagaaggtggacgacacacagacagtgggtgggaagggtttgactgggacgaagagtcgagcatcccgagcttctcctgcaagcaggaggcacagatgcaggcgctgccgtcggccataccgaaaacctcacccacgctaggtgggtacaactgctcgcgtactttaatctgtcctggtctcccaccaccacagccatcaccatgcctgttgccatctcctctcgggctggtcgtctcaatctttgatctaccactagctgcatgttccagagaattgtctcgccatcagcttcgctgcaggtctaccatgaaacccttctaggaagtaggaactccaccggcagcaagcctccagtttttgcacgagggccctttccccctcctctccatcagccccattgtccctcctcttcgcaccaccgggcaccggcatcactaggggcacaccactccatgggaccatattagcttgaccagatagatctaggcttgcctggctcaccgtgatcagacctgacggagaaatgagggaagtaagtacggaggaaggagagcggcatcgagcggtgaaaaggtcacaaggaggattgcagagcggaggggatgggagggctcaagctctagcccgactacctgccctgcccttttattgccctcatggccaaaggaagaagatgagatgagtcgacgctgataggagggtcccactagcctgataggggagggcaaatgaagtggaggctgacaagcggggccgatgccatgtgtgcacttacgactaaaaccccctcggatggacttaggggggtaattcgtccggtttggatagatcacgattaaaagtatctggtattgtagtttaggggtgtaaattggacaaacgcaatagtttagaggtaaatcggaattcatcctaaaatatactccctctgtttcatacttgttattccaaatatttgtcattgtttatttaatctttgaatattaatatattttaaatggtatggttagattatgattaacggaatcttaatgtttatttatagaatgcaacagcttattttttttcaaaagaaacagaagtgatttagttataaatgatgtcaggtgacaagtactccctctatcccacaaaaagagcattcctaacatgccaaggtaaaattaatggagagaaaaatgaccaaaatgtccctcattatttaaaaaagtaatgataggtaggtaaaggggataaaagttcttgttttatttgtgagggtaggtaggatggtagaagttggtttttatgggacaaaattcaaactctagaagtagagttttttttaaggacggaggaagtatcatttgggattggagggagtatatacatctcacttattccagtctccctgattaaacatgtatgcaaataacttgagaaaattatatgtacttcccaagcaccatggtacatcctagccccaaataataattacattagtcttctctacacgttacgtgggtccatgttcatatagcactccacttacactttcatcctcagttcatataaaagggttaacccgcatgtattatggttggagtgaggtgggtatacaagcagctccagactaatctaaactcttcatgtgggactattcccattaaacaaacactagtgtctagtggatttaaattgaaacagaaacacacatggagcaaaacagactaaatagaatgaggtatattacaaaggtgccagagataactactaggttagataagaagagagaagggatagatataaaggagggttctcaagtctcaacaaatataacattaaaagtcacatgcatcctggtgagcgaggaattgaacttattgaaaagtaatataagtataatcaagactaataaatcaaattagcgctctgagctgcatttattatgagaccaggagctctgcaaatattgtcgaacaactaagtcttaaatttatgatgacaaagtactgaattatttggttatatttatagataaagagaggaaaatatggtcataacaaaatgcaaatagcttggaacaacaattagttgcaaatacaaattacagatatcatctccttgatctagatctttggttagtatcaaattgaatgtacggtgaatacgtcaactatcgttgatcctgatctaattaataaatagcccaataaatctaaccaaatgaacccaaatgaagacatcagaaaaatggcaaaatttattgtcctgaggatcttagttcgtgggcacgacaaaagttaatttttggaggaaaacactatcaaaatttgtcaatttgctgctagacaccacatctaataaaatatttatttaggtttatggaaataatttgaaatgttagaaatggcactggcccaattggatcagattatttcagttccgctctactttccctttctctccatggtggtgcaggccgaggagcacagcagcatcagcgtcatgcccgatctagcccttgatgggccaaaaatcaaagggtagaccgagagagacagtgaagtagtgaggtggtgaccacattggcttcaaggacatggagcgacgagcgaagccctgtcatgtgaagcgagcacggctggccagctgagaagaaagaatatgaaagagccccaagcacagcagcccttgtatgattttgagatcaatcatgtggacgtggtcctcactgtcgagcgcttggaagaaatagcatggttgggcgtgaagcatactataacttgacaagcggcgagagtgcgttgtatgcatggaatgtgctccggaggtgcagtggctgtgcatgacggcaagcagttggagcgcaatcggcgagtaggcccctagcatgagtttagcccacgtgcgcacaattcatccccaagtaggctgtgacattctcagatgatgacctaaaccgggacacctaggcaatctccagaagcaggtcctgcacctatggtagttggtccatggatatcgtctcggtacacctgagtaacagttaagcagccacagcacccacatcctcgttaccctacctagccaccgctaccaacccagcttccccacggtgactgtgccatgcaactgcatccttttccaccctcctcgtcagccaccggccttcatcgctgtaacgttggcaccacgggcacgcgacaagactccacggaatatcaaatcattgctcacaagaaaatggaaagcaagcatgaggaagaggataatataactagtgtggccaggacatttctagcatttgacgtttcctgctctcctttttcagtgaaaattaaaaaaaaaatccaaagctttaggattctaaactttgcagcagtattgagatgcacctcataattgatttcaaatttcaccctgcaatttcagaaacttccactagttcagttcttggggtccccgtagtcatccactcataaaaaaatatcagttatttggtggaaattagtcaaaaaccatgttccgcatcgtcgtctcctctcctcgagctaaaatagcgcctaccggcggcgctcacctggacaccccatcacgcgttggtgctgctgccgtcccccacggtgaatcagctgtgccccccttcctctcggcccagccgtagcaagtgccgagccctcctggctcgcggcgatgtttcttatgcacactctcggtgcagtggcggggtattggagttcggggttagccggatgagcgtccgccgcacctggcgccaatggctgcagatacctaactcattcgtccttttccttcctctggcaccagcttcattcggggtattgctcttggatgcagcgaaatttttttcttattcaaagttttgttttaatcttccggtagagtgttaattagcaaatatatgtccccacaagcccatgttgatttctgctttctcatcctcattttttagcaatgaccaataacaaagccaatatgtccactatagatatcctgcatacaagattgaatcgttgcgattacaacttaaccagattacccaacatatcattagcacatgctgaaaccttagatcttgttttttttatccaaacccaaaatccagttcctaaaatatgatcaatgtttttgggtggctgtaaaccataaactatatgaatagtctgccaaataaaactagtagcaaactgttacagtcaatgaaagagtgttgtgtagcctcatcagcaccatgaaaacaacatattttactacctcgtcatctccttttcactcaactatccttggttggagtaacaccttttcacaagtaccataaaaaacaactctactttgcaagtttcataaagtatcacaaagttgttcgatgtaatatggaatttttgcagtacatcaaagctcaacgcgttgaatagtttaaaccgtccatgttgttgaagatttatcgtagctactttgggcagtagatcttgccaagctaccaattcaggaccaataattgcccttcgaaaagcaatgaggatttacacttgtgtgatgcattcaactattcttatttacatagatgggtatttagtcatttacagccttattgtttgctggggcatgacaagacaatatatggttgtgtgaggatggggccccatgtaaggacgtagcaccatgggctctacttagcacgcccaactaataaatagtacactacaagaaaaatactctgtatagacatttttctagtactgtagaggcacttatcaaatgcctttacaacaatgtagaggcattttaaaaaatgtctaataagtgtcttatggtgaattgtctctacaaacgaagagacattttataaaatgtctataagatggtagaggcattttttagagacactaaattgtaccgcaaacatataaaaccagtccaaaaaagagaataaaatagtttccttgcttttgataagtcttgaactcatgatcttttggttaaatcattttaatcttcgatacactaaccaactcaactccatgtcattacttgtatacttgttcctttaattacttatatttagtcgtttagtacacattatcattctaaaaagtgtctctacatagtttaaaatgtctcaacaaaatgcctttacatattagacgcatttcatagtgccgaaagaatgcctctacaagataaaatctaacaaactgatataaaaatgtctctagagtaaaagttttctaggcaatttttaaagtgtctctacactataaaacttctgattgtagaagcaatttacaaaatgcctctacaaaagtgcctctatacgaggtttttgttgtagtgagtataacaatgtatgccctaacatcatggaaacaaacgatactataacattaaccaatctgacctaatttcttaggctaattccctggtgcttagtatggcggatgagtataactagtagtgctacagtagctgatcttagacgtaagacccataggcccatagcaagtacaacttctttatacaattccttataaaaaatgcaactctagttgttgagacatccaagaaaatgaaaacccatttctaatttgcatcatttattccattgtttccacagcctgctagaaatgcaaaatagatagcctgcacgtcatctggcaaataaaataactttggaagcatactatcagtatctctaataacgtccttaggagtatcaaaagtccaatgtccaattgatttatcgaacatgcaggaaaataataaatttccaaacagatttaaagctttataacaaaagaaaaggtactggagaaagattgatctcctatgttactttgattggtgggaaaattgttgttttgtaaacataaagctgacaccttcattgcagttgggttctattggatttcaaatccaaaattattatttcatatttgtaatctaaatgttgtattaaagatattatctggcttgttaattagctttcattcgccgaaactgcaaatttggtctgtttcttgtctgaaacacaacaaattaccaaattgattttttttaattcgcattagatcggatattttcctttaatatatatatatatatatatatatatatatatatatatatatatatatatatatatttgatttgctatatgatggtttgattttctacttattgaaattaataattaggtaacgcaagaaggctggatggagttttactgagtcctgaatcttgttcctgcactgtgtaacatgaactttttttttcctcagcacaaatggcagaagcaattattcttgctctatcaaagattaatagtacttttggattggatcccacaaatattgccaaatctgcagtatccaagctatatcagaaaggaaagagtttggcggagttaccggggaaggttgaagaaataagaatggaactaacaacaatggaaaatgtcatagaacaactagatacagcacatctcactgacaaagttatcaagggttggattgcggaggtacgaaagctggcctaccatgttgaggatgtaatggacaaatactcatatcatgctcttcaaatggaggaagaagggttcctgaaaaagtacgttgtcaaaggatcacattatgccattgttttcgatggaattgttgctgagatagtccagattgagcaggaaatccaaagagttataaagctgaaagataaatggctgcaaccatcccagcttatccgtaataaacattctgattttgaaagaaagcggtcacaaggctgcttgccagagctcgtaaaggatgaagatcttgtggggatcgaaggcaacaggatgttattgactggatggttgtactcaaatgaactagatagcacagtgataatagtatctggcatgggtggattaggaaaaactaccattgttgccaatgtgtatgagcgtgggaagatcaggttccatgctcatgcttggattgtcgtgtcacagacctatgacgtagaagaattgctgaggaaggtactcaggaagattggatatgcagatcaagcacacttggatggtatggatgttcatgacttaaaagagaagttcaaagaaaacataagtgatagaaggtgtttgatagtgttggatgatgtctgggatagagaagcatacaaccaaatacatgatgccttccaaaatctccaggcaagccgcatcatcatcactacacggagtaagcatgtggcagcactagctctaccaacacgtcaccttaaactccaacctttggacaaggtcgatgcattcagtctcttctgcagaagggctttttatagcaggaaggactacgattgcccctcagaacttctagagttggctaattcaatcgtcgataggtgtcaaggcctacctctagctatcgtatctattgggagcctgttgtcctcaaagcagccgatacagcatgcttggaagcaaacatacaatcagctacagagcgagctagcaaagagtgatcatgtacaagcaattctgaacctaagctactatgacttaccaggagacctcagtaactgctttttgtattgcagcatgttccctgaggattgccccatgccacgagacaaccttgtacgactttgggttgctgaaggatttgctgcaagaaaagaaaacaacacgccagaagacgtggctgaaggaaatctcaatgaactgatcaaccggaatatgctggaagtggtagagacagatgaacttggtagggttagtacctgtaagatgcatgacattatgcgtgatctagctctttttgtggctaaagatgagagatttggttcagcaaatgattctggcacaatgatgctgatggataatgaagtccgccgcttgtcaatgtgtcgttgggaggacaaaggtgtctataaagctaaatttcctcgccttcgaacattaatatcagttcaaacaatttcatcctcctctaacatgttgtcctcaattttctctgaatccacctacctcactgtccttgagctgcaagattctgaaatcactgaagtgccaacaagtatagggaatctgtttaacctaagatatatcggcttaaggcgcaccaaagtcaagtcatttccagagacaattgagaaactctataatctccacactctagacatcaagcagacaaaaatagagaagctaccacgagggattgtcaaggtcaggaagctacgacaccttttagctgacaaatgtgctgatgagaagcattcagatttccggtacttcactggagttcaacctccgaaagagctatccaacttagaagagttgcagacactcgaaactgtggaagccagcaaagatttggccgagcagctgaagaaacttacgcaactgtgaagcgtgtggattgacaacataactgatgttgattgtgcagttcttttttc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0219600, RefSeq:Os04g0219600