Os04g0221000

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Revision as of 11:00, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0221000| Description = Conserved hypothetical protein| Version = NM_001058802.1 GI:115457333 GeneID:4335197| Length = 7611 bp| Definition ...")
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Gene Name

Os04g0221000

Description

Conserved hypothetical protein

Version

NM_001058802.1 GI:115457333 GeneID:4335197

Length

7611 bp

Definition

Oryza sativa Japonica Group Os04g0221000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:8057066..8064676

Sequence Coding Region

8057348..8057419,8057918..8057994,8059002..8059233,8063509..8063631,8063715..8064080
,8064163..8064648

Expression

GEO Profiles:Os04g0221000

Genome Context

<gbrowseImage1> name=NC_008397:8057066..8064676 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:8057066..8064676 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgaagcccaaccatcgtgcccgctccgccgctgccggcggcggcgggggcggcgggggcccgatagacgcggattggaagtacttcctcgacaatgtccgcgaggaaggccactcctacgccgtccgcgtccctgccgacggcgccaacccttcctactacctccaatacgagaagcccctcaccaacggcgccgcctccacctcctcccggggcggggctgcacgcaagcgctgccggatggaggaggaggaggaggaggagagctcgtccggcgaacccgaacccgcacccgaccccgacattgaagaggactaccgcgtgttccttcagaacgtgcgcctcgttgggcatggcggcttcgtgctggagcatgagggcaatgtgatcaggtacgatgcttcgggcgcggcgctcagctcggatgagtcttccgatgagtccgtgatgggtgctccggagcccgatccgcgtcgacgaaaggcgaaaattgtggaggaggatcaggaggaggaggaggatgtgaagaatgaggttgccgttccgtctagaaagaaagattttaccatggtaaaagaggatcaggagaagaaggggaagagagtggtcgaccttcctgctaggggggaagatggtgccatggtggcggaagaggatcggaagaagaagctcagaaaagagttcaactttcattcctttcattctaaggggaaagatgatacaacaccagtgaaaaatctgaaggataagaagaaagaggttaaaaatccaaaggataagaaggttcatgggaagaaagaggttgccctttctgctaaggggaaagattgtcaattagcagagggtgtggtgatcaaggtggaagaggaagatgggcagttgcagattgtgccggctgtggagaaactagcgactacaactagactgacaaacttaagcaatggccacaaaaccgcccctcgtatcgcttcggggtcacatggagttatatggccaatacatataaatgatagggaagaatcggatttcaagcaaagattgatacatgttctcaacaaaccctttagccagggagaatatgacaaactctttggtatggctactattcgcaatccattgacaagggaacgtcggacacgctgtggtgtgaagtattactactctcaacatgagaaggcaaaatcatattttgattgttacccagatcttgccaaacaagttgaagaagccagctatcccaatcgcttggctctgttgcgtgggcttttcttctggttggagaatattgggcaagatgatcaattcaggccgtggagagacgatcacaaacgctacaaaattatgtctctctga</cdnaseq>

Protein Sequence

<aaseq>MPKPNHRARSAAAGGGGGGGGPIDADWKYFLDNVREEGHSYAVR VPADGANPSYYLQYEKPLTNGAASTSSRGGAARKRCRMEEEEEEESSSGEPEPAPDPD IEEDYRVFLQNVRLVGHGGFVLEHEGNVIRYDASGAALSSDESSDESVMGAPEPDPRR RKAKIVEEDQEEEEDVKNEVAVPSRKKDFTMVKEDQEKKGKRVVDLPARGEDGAMVAE EDRKKKLRKEFNFHSFHSKGKDDTTPVKNLKDKKKEVKNPKDKKVHGKKEVALSAKGK DCQLAEGVVIKVEEEDGQLQIVPAVEKLATTTRLTNLSNGHKTAPRIASGSHGVIWPI HINDREESDFKQRLIHVLNKPFSQGEYDKLFGMATIRNPLTRERRTRCGVKYYYSQHE KAKSYFDCYPDLAKQVEEASYPNRLALLRGLFFWLENIGQDDQFRPWRDDHKRYKIMS L</aaseq>

Gene Sequence

<dnaseqindica>7258..7329#6683..6759#5444..5675#1046..1168#597..962#29..514#gttccccacactctcctcacagtcaccaatgccgaagcccaaccatcgtgcccgctccgccgctgccggcggcggcgggggcggcgggggcccgatagacgcggattggaagtacttcctcgacaatgtccgcgaggaaggccactcctacgccgtccgcgtccctgccgacggcgccaacccttcctactacctccaatacgagaagcccctcaccaacggcgccgcctccacctcctcccggggcggggctgcacgcaagcgctgccggatggaggaggaggaggaggaggagagctcgtccggcgaacccgaacccgcacccgaccccgacattgaagaggactaccgcgtgttccttcagaacgtgcgcctcgttgggcatggcggcttcgtgctggagcatgagggcaatgtgatcaggtacgatgcttcgggcgcggcgctcagctcggatgagtcttccgatgagtccgtgatgggtgctccggagcccgatccgcgtcgacgaaaggtttgccagctcgttctactttccatcttcttgtttactgttgttgtgcgcgtctctgacatacatgtttgcttgctcttaggcgaaaattgtggaggaggatcaggaggaggaggaggatgtgaagaatgaggttgccgttccgtctagaaagaaagattttaccatggtaaaagaggatcaggagaagaaggggaagagagtggtcgaccttcctgctaggggggaagatggtgccatggtggcggaagaggatcggaagaagaagctcagaaaagagttcaactttcattcctttcattctaaggggaaagatgatacaacaccagtgaaaaatctgaaggataagaagaaagaggttaaaaatccaaaggataagaaggttcatgggaagaaagaggttgccctttctgctaaggggaaagattgtcaattagcagagggtgtggtaggttctcatggcccaatgttggttatttctgagtctgatgtaatgtgtgtgacaaacatgcgtgacatgtgcctgatcaggtgatcaaggtggaagaggaagatgggcagttgcagattgtgccggctgtggagaaactagcgactacaactagactgacaaacttaagcaatggccacaaaaccgcccctcgtatcgcttcggtgagaatttcttatgttatgcatgccagtttctctaatctgttatgtcggacattagctaaagatcatatgtttcatgtgcactttcattttggaaatagttctctgcatctgtgctttgcaatcggtacttagcatcgtacaaatgtcaaaccttctttgttgtagaacctgtgtcttccaactttttttgagtgtagatggctcgtacatcatgtcgaaaaatcgtacttgaattcaaattagctagtatattattgttaaagatggaaacagtttgactgcttatcatccacttttagcatgcttgatcaactttagctttgcactacttgcccttccgagtgcttcttacttcacaattttggctaaaacatgacaaattagcctacgtgcctattgctgtgtaattctgtatgaacattatagtcaatatgtttttacaattgaaaaatgataacctattttcgattgtgaaatttatattttccctgttgcacttcatgaacttcatcatactaacctaacaaccctcacagctgtttgttttcttttgaatgaagttcaacatcaaaccatgaaacaaaaaatcttcaaacttttatttccagtacaaagaacccatgatccaacaccagttgattttcttattgattgtttcctgttacaaaatttgttgatttagcgctatagtacatgctaaatggttgatgaagtcagccattgagtccgctatgagaagcactattttgtttgtttccaatttctaacattcatagtttgagtgttactggagtacttttgttggtgctcatggaagaagtgggtctgagacctgggatggctcagcaggagggaaaaacaaaatctgcctatctggttaggcttctaacgataattaagagagatatgtgtaaagactaaaacaagatatttggatttgttgttttttgtttgtccgccttttggcattcatgctttgtttctgtggcccccagaagctactacagggctttgagatagctgcagagccaattgtacagaattaggtggtttgagattatgtttgagctggtcctgattagcatgcattctcaataagacacttgtgttaaattgtttgcagctctttctgttcataaatccagcattggatctctcttttttgtttcggcctaccacagcttgatttcatgacacttttcttcggatgttttgtttgacacttgtgttaaattgtttgcagctctttctgttcataaatccagcattggatctctcttttttgtttcggcctaccacagcttgatttcatgacacttttcttcggatgttttgtttgaaaacagtttgacttgacaagttgtaatgctacgtgaaggattaatgtgaatctaaaattgggctgtattgaattatagaacaggctatatctgtttaatctgcttttgataacatgggcctagcaaataaactattcattttctgttctattcaattaatgaataaatctgaagctacaacttcacaaatctgctcgacttttaccttgtctgccttaaaatgatcatcagtagttgctcgagcaattcccacttttaataatataaacaaacgcctacttaacaatgtttccgtaatctagtactctgtaattcctgcgtgtgcatactacggtttcctggccttctaatatacaatgtttcatctagtctaactgactagaagttctgccactgcaatttatgtaccaaatttggttctgaactctagttttaagcaatgtacgtgtataagacaagactcatatgtgcatggtccagtcgagaagacgtccttggcttagaatttctttttcatttgttcaatgttcttggtcactctgtatgccgttcatgactgggttcgtgcaccattagacagtgataattagtcgctgttatcattattcatgggccatctgatgggcataaaactctcttcatcagtgatagaatatatttgattattgccattagctaacagggcctattcacatattgggcctcagctcaagtacataaaacccaataattgggagataataattgaaataccattgcctaaattgccttaacaccatcacttgttagagttcaagcgatgctatgaaagcaaatccccaataattagaggatgctacaagttgcccaataatcatttgtttgttgaactatttccttaaacagatctcttcacaattttgtttagttaaggaaagtgatgaaactaggcaagcacacaacccttacatcgccaagtgcttagcacttgttacaaagaaagggataaaaggccaaaaaaatattacataacaaagaaattattgttggccaacacaaacctgcttctggaacaactagagaaacattcacatgaactcgataactatgcagcaaaaaagttttgagtttttaatcttcggaggaacacctccaagaagggttacaatccattgtcatatccaaccattacaacccatcgtcatcgccaaatccaacctgtgaatattagataatggatttctctccgcatctcaagtaccaattctccatggcaaagctttcaagaagcgcacctgtcgacgccattgatgaaactaaccaataaatagtagaaatatggttttcatccttgatgaattattagagcttgtagataatttctcaacactatctaattgctagatccaattaatttagactagattgatggatatagcaaagtgaagaccagatcatcataggctaccatagctgtcgagccatcatgatctccaccctgctgatgaaggaaggtcgaccgttggggaagtcattcctcgaccaccactccctccacattctagctatccccaactctatccaccgccaccataggttggcatgcctagaaaggcatatttgtcaaggtttcatgaccgctgacgatcgcgtaccatcactctccatgcagtgaactacagctgccaacggcccaaagaatctatgttggacgatgagcagtgaggatatggaaatgttgggcggtgcggcgaggatcacacaaccatttaatcggatttgaaaccctattaggtggaatcttccaactaccacaccaatgctgtttcccgagaactctttatagctagggcatgttatatagttttacaacatttttaaccttcttaatgattatgcattctggcatttttgtttattgataatgctgtataccttgttggtatataggtctttttgctatttatatgcacatagtttcagaagtattcattatttggccttatttgggaataattgaaattgtgctgggatatgattcgtactcatttccaaggctaaaaaaagacgaaaacaaatacactgaaggaattttcggtttgcacccaatccattctcatctcatagctctgtatgttgttgcgcgtgaggcaccagctacatggctgcctgtctccaaggacaccaacttgaacatagtggtaaaatttctaggaagcaaagttttttgtttgttcactttcctgatgtgaaactctacaagaaacaaaaactcatgttagatatacgactgcagccaaacaagaaacaaaagtataaaacacattttcatttctgtcatcttatcaaattggttaacgaaatgtcaaatgcggtgcatggacatatgcgagcaccaatgggaaagctcatactaaagcaattacatgaagtgggttaatacatggcaattttccacttggtggggtggattagttggatgagttttgactttgattgcttttttttaatactaacattatcttacctttttttttttttctgtttttccacacattttcttcccttgttccatatctcttagatggcaagacttattggaccacattattctcaccagggttgactactagttccttctacattgaaagaatgcgatggaggctaatagttcgaatcattcacgaaaattgttaatgttgtagtatttgtatatttgtgtaccatgcttattcacagtgcacatagatttttaaaaaggaaggagcccatgtagttctgatccttttgtttgattgttggaatgcttttgtgtttctcatctttgattaatgctatgccatacttttatttctcgtaattgttagttgtatttttaattttagaagttgtcagtatgtcataacatagttccttttaattgcaacacatttctccttattcatttttccaggggtcacatggagttatatggccaatacatataaatgatagggaagaatcggatttcaagcaaagattgatacatgttctcaacaaaccctttagccagggagaatatgacaaactctttggtatggctactattcgcaatccattgacaagggaacgtcggacacgctgtggtgtgaagtattactactctcaacatgagaaggcaaaatcatattttgattgttacccaggtattcttgcttatgtatcatgcacattcatttggtatgagtgtgacagacattttttttgatttctgccatgtattattttgttagtggaagaaatctttctataattacagaaacgataatgtgtactgttctgtttttctgtgcttattgaacatctatttgttatcctttatggaacgtttaaaaggttttcctttgctcgcaagtgttattttcattgtttgggactatatggtttttagagtttttacatttttatgccttattcaagtctgcccatgacaatgtttatcctacaaactgaccataacacggatggatgatgttgtattcatctgtgctcaagtatatggaatgttggatcattttgtacaacactgcgagcgtccaaaatagttttgttttggacttcatactgatcttatgtgagctaaattgtttcatttaaaattttcagcatgtatgcagatgtcactgctgtgatgggaatgctgaaaagaacagtggatttatccccatcgagataatccaagaaatgctattgacaagtgcccaattccaagaaatgccatcaacagtgcgagttccataaaacgccatcgtacacgcaactttgttctagaaatgtcatcgccgttagggttgtgcccatcctgccccgttaaatgcattgttcatcctatagcacataaatgatagctcctaacggaaccgtaatggcaatggcattttcgggacaacatcactgatacgacgacatttcatggaactcgcacttgtcgattgcatttcttggaatttggcgcttgtcaatggcatttcttggattttctctattcgattaagtataatttttattttcttttgcttttgatgttcttttgccctcaaagagatgacaaagctgaccttggtatcaaatgaaatctgcaaaagtgcactaatctggtttgtattctgttgttgagctatagcagcaattaattttatttatttgactacagatcttgccaaacaagttgaagaagccagctatcccaatcgcttggctctgttgcgtgggcttttcttctggttggaggtaacttcatactgttttgtgcaatgctagtttttttttttttttttgatcaagggcttgtcaatttgtgcaatgctagtaattatgatgttggagaacttcatagtgtctagctgctagtattcacatttccatccctgttaagctctcaatatatttgtgtttacttgcacaaactactcccaatcagagcagattatttgtttttggtagagttaaagaaccatattttttagtgtaggtttacagtttgtctagccctgtgatgtatgttacacttggactgctacgtgctaaatatggggctgggactaatttctgggaatgatgccaaatgtcactagtttgcttccttttgcagcattagtgttcgtattatcttcgtactagcatgcagtggcataccatttggctacatgcttgcgcaatagtacgattttttttttgaacatttactctagttctttgtagttttcttgactgtgtattgttttgtagaatattgggcaagatgatcaattcaggccgtggagagacgatcacaaacgctacaaaattatgtctctctgagaacacataacaaagttcttacttgcatgtgattatctgcagcatctcgcccatcattgttgtaaatacgtacccagtaaaaaaccgtagaatggaaatggcactgaatttaggcccttctctagtctccatagataggataaccttgggttctctcaccttctctttgtgtaactgagtatggggttgactaaaatgtgtttagagaatgtttacttgtactaactcagtccgaattctggaacaccctatggctcatggctttctatcggaggagcaaaa</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0221000, RefSeq:Os04g0221000