Os04g0223300

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Revision as of 11:00, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0223300| Description = Similar to Peroxisome type ascorbate peroxidase| Version = NM_001058806.1 GI:115457341 GeneID:4335202| Length = 2567...")
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Gene Name

Os04g0223300

Description

Similar to Peroxisome type ascorbate peroxidase

Version

NM_001058806.1 GI:115457341 GeneID:4335202

Length

2567 bp

Definition

Oryza sativa Japonica Group Os04g0223300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:8231680..8234246

Sequence Coding Region

8231825..8232028,8232329..8232431,8232589..8232668,8232763..8232845,8233117..8233165
,8233260..8233325,8233642..8233691,8233823..8233947,8234092..8234207

Expression

GEO Profiles:Os04g0223300

Genome Context

<gbrowseImage1> name=NC_008397:8231680..8234246 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:8231680..8234246 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcggcggcgccggtagtggacgcggagtacatggcggaggtcgagagggcgcgccgcgacctgcgcgccctcatcgccagcaagagctgcgctcccatcatgctccgcctggcgtggcacgacgccggcacgtacgacaaggcgacgaagacgggagggcccaacggctccatcaggttcccgcaggagtacagccacgccgcgaatgcgggcatcaagattgctattgatctgctagaaccgatgaaacagaagcatcccaagattacctatgctgacctgtatcagcttgccggagttgttgccgttgaagtcaccggtgggccaactatagattatgttcctggcaggagggattcttcagattccccagaggaaggccgtttgccagatgctaagaaaggtgctgcgcatctgagggaagtcttctacaggatgggcttatcagacaaggacatagtagcactctcaggcggccatactctcgggaaagctcgtcccgaaagatcaggatttgatggtgcctggacaaaggatccactgaaatttgacaactcctatttcattgagcttctgaaagagaattcagaagggcttctgaagttgcctactgacaaggctcttgttgaagatcctacattccgccgctatgtcgaactatatgccaaggacgaagatgcatttttcagggactatgcagagtcgcacaagaagctatctgagctggggttcacgcctcctcgctctgcattcatctacaaatcatgccagaaaccaaagtccctgttgatgcaaactgcagctggggttgcagttgctgctgcagttgtcgcatgggcttacctctgtgaatccaacaagaggcttggctaa</cdnaseq>

Protein Sequence

<aaseq>MSAAPVVDAEYMAEVERARRDLRALIASKSCAPIMLRLAWHDAG TYDKATKTGGPNGSIRFPQEYSHAANAGIKIAIDLLEPMKQKHPKITYADLYQLAGVV AVEVTGGPTIDYVPGRRDSSDSPEEGRLPDAKKGAAHLREVFYRMGLSDKDIVALSGG HTLGKARPERSGFDGAWTKDPLKFDNSYFIELLKENSEGLLKLPTDKALVEDPTFRRY VELYAKDEDAFFRDYAESHKKLSELGFTPPRSAFIYKSCQKPKSLLMQTAAGVAVAAA VVAWAYLCESNKRLG</aaseq>

Gene Sequence

<dnaseqindica>2219..2422#1816..1918#1579..1658#1402..1484#1082..1130#922..987#556..605#300..424#40..155#ctatcacctctcctcggatcgtcagcaacagcggcggcgatgtcggcggcgccggtagtggacgcggagtacatggcggaggtcgagagggcgcgccgcgacctgcgcgccctcatcgccagcaagagctgcgctcccatcatgctccgcctggcgtgcgttgccgtttcatcttcttcttcttcttcctttgtctctgctgtccttgctatgctccacgatcgtgtatgtctagctcgccgctgatgtcgtctgctctggcgccgccgccgccgccggccgccgctgtttttgcgcaggtggcacgacgccggcacgtacgacaaggcgacgaagacgggagggcccaacggctccatcaggttcccgcaggagtacagccacgccgcgaatgcgggcatcaagattgctattgatctgctaggtctgtgcatgtttctgtcagattcttgttcaggatgtgaacttgttttttgatgctgttgttgttaattttgttctgaccttaacaagtttgatttgagatgatatatatggttctttcatgtggtgcagaaccgatgaaacagaagcatcccaagattacctatgctgacctgtatcaggtaactcagctgcatatttgaacactaacaagtaaccttacaatgggcctgttcggcagctcgattacgcagctgttttggctgtgctgtacagcccagccgttcgtctgcctgttggctggcagcggcctggctgttggctgcctgcagcctctacagccgctgttagctagctgctgtagcactgtagctgctgctgccgtgcagctgcagcgctgcagcagcaatctcatccgaacaagcccaatcctactttcctgctggtaaacttcaccaatcacataccaattataaatctcatcacctctaatttcagcttgccggagttgttgccgttgaagtcaccggtgggccaactatagattatgttcctggcaggagggtgagttgatgcatcgacattgattttttttccagactgaatatcttatgaaaccatcttgagttctccttttttttttctcatttatctacaggattcttcagattccccagaggaaggccgtttgccagatgctaagaaaggttgattcatgacccgttatctctgctcctatctactaatctaaaataaaatatcagctccaatgcattgatacttttttctgtgatttcttgggttaattttgctaattataaatgattaaatgaaatgagcgctgaaaccttccaatatgttgtatgcacaaagttcagatgatacaattaaattcgaaattttgtttttctggataatttgcttcaaaaatgtcaaaggtatttagtttcttgtactatattttacttttttgaaaaggtgctgcgcatctgagggaagtcttctacaggatgggcttatcagacaaggacatagtagcactctcaggcggccatactctcgtatgcaacatcatctttctactggtgtatataatatatcaactactattttccagctaaattagagatcatgttctgaatagttcattttcaggggaaagctcgtcccgaaagatcaggatttgatggtgcctggacaaaggatccactgaaatttgacaactcctatttcatgtaagattaaatatgacttgtccctccacagaattaattattgatggtgcttggacaaagaatcctccgaaatttgataactcctatttcatgtaatattaaatatgacttatccatctatagaattaattaaatatcaccatttgcttcaatgcagtgagcttctgaaagagaattcagaagggcttctgaagttgcctactgacaaggctcttgttgaagatcctacattccgccgctatgtcgaactatatgccaaggtacatcgcatttatatcccaaatcttttctattcactgtaacatttcaggtagcttatcaggatggtaattaattttttttcttttctgaaaatcgtagtgcttctgtaaatgtcatgttttcctttgttatggtaatcacaatagtttgtaaactataaactttctgatagattgcattagtattgcacaaatagaaacctaaccagaatgatgtgtgcaatgagcaattgagcattctctagttagtagttaatgagttcttgatttgctaacaataatttgtatttttctttgtaggacgaagatgcatttttcagggactatgcagagtcgcacaagaagctatctgagctggggttcacgcctcctcgctctgcattcatctacaaatcatgccagaaaccaaagtccctgttgatgcaaactgcagctggggttgcagttgctgctgcagttgtcgcatgggcttacctctgtgaatccaacaagaggcttggctaatttaatttgcatcgatcacaatgatcgttatttcgtctcaaccactaatggctgtacaaaaagaaggtactcgattggaacatttggatgatgtatatgtgtttgttggtatatatatgtgagtgctgctaagtctgctatgttg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0223300, RefSeq:Os04g0223300