Os04g0223500

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Revision as of 11:00, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0223500| Description = FAD dependent oxidoreductase family protein| Version = NM_001058807.1 GI:115457343 GeneID:4335203| Length = 6183 bp|...")
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Gene Name

Os04g0223500

Description

FAD dependent oxidoreductase family protein

Version

NM_001058807.1 GI:115457343 GeneID:4335203

Length

6183 bp

Definition

Oryza sativa Japonica Group Os04g0223500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:8236141..8242323

Sequence Coding Region

8236307..8236664,8236766..8237118,8237221..8237396,8237517..8237754,8241832..8242272

Expression

GEO Profiles:Os04g0223500

Genome Context

<gbrowseImage1> name=NC_008397:8236141..8242323 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:8236141..8242323 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagaagaagcgggtggtcatcgtcggcgccggcgtgagcggcctggcggcgtgcaagcaactgctggagcgcggctgccggccggtggtgttcgaggcggacaccggcctcggcggcgtgtgggcgcggacgccggagtgcaccgcgctgcagacgccgcggcccatgtaccagtactccgacttcccgtggccggagacggtgacggaggtgttcccggaccaccgccaggtgatggactacctcggcgcctacgctcgccgcttcggcgtgctcgactgcatcaggttcggccaccgggtggcggggatggagtacgtcggcgtcggcgaggaggctgtggcggcgtgggatgagtgggctgggaacggcgacgctttcggctccggctccggcgagtggcggctagaggtggtcgacggtgagggccatattgagacacacaaggcggattttgtcatactttgtattgggaggttcagtggagtgcccaacataccaacatttcctccaggcaaaggtccagaagcatttgatggccaggtgatccactccatggattactccaagatgggcaccaagaattctaaggaaatgatcaagggcaagcgtgtcacgatcgttggctacctcaaatcagcacttgacattgctgcagaatgtgcagaagtaaatggtactgagattccatgtacaatggtggtccgaacaaagcattggatcataccagactattttgcatggggcgtccacatctcaaagctgtatcttaatcggttttctgagcttcttattcacaagcctggtgaaggcttactccttagcatcttggccaccctcttgactccattgagatggatattttcgaagtttgcagaaagctattattccattccaatgaagaagtatgacatggtgcctgaccatagcctatttgaggctttgattacatgcttggttgccattacacccaaagaccattacaagagattagaagaaggcagcattgttctgaagaaatcaaagacatttagcttttgcaaggaaggtgtgcttgtcgaaggccaatcttcgccgataaagagcgatatagtgatctttggaactgggttcagaggggatcagaagatcaaggagatgttcacttctgaatactttcagagcattgcagtaggctctgcatctacaactgtacctctctacagggagatcattcacccaaagatcccgcagctcgcggttatcggctattcagagagcttggcaaatctctacacatcagaattacgggccaagtggctggcacatttcatggatggtggcttcaggttgccaagcatcagtgtgatgcagaatgatgtcctggaatgggagaagttcatgaagcgctattctcgtggttactttcgcagatcctgcatcggaatccttcacatctggtacaatgatcagctatgccgggacatggggtgcaatccgaggaggaagaacggattctgggctgatttattcgacgtttatggccctagtgattatattgatcttttccccaagaaagagtag</cdnaseq>

Protein Sequence

<aaseq>MEKKRVVIVGAGVSGLAACKQLLERGCRPVVFEADTGLGGVWAR TPECTALQTPRPMYQYSDFPWPETVTEVFPDHRQVMDYLGAYARRFGVLDCIRFGHRV AGMEYVGVGEEAVAAWDEWAGNGDAFGSGSGEWRLEVVDGEGHIETHKADFVILCIGR FSGVPNIPTFPPGKGPEAFDGQVIHSMDYSKMGTKNSKEMIKGKRVTIVGYLKSALDI AAECAEVNGTEIPCTMVVRTKHWIIPDYFAWGVHISKLYLNRFSELLIHKPGEGLLLS ILATLLTPLRWIFSKFAESYYSIPMKKYDMVPDHSLFEALITCLVAITPKDHYKRLEE GSIVLKKSKTFSFCKEGVLVEGQSSPIKSDIVIFGTGFRGDQKIKEMFTSEYFQSIAV GSASTTVPLYREIIHPKIPQLAVIGYSESLANLYTSELRAKWLAHFMDGGFRLPSISV MQNDVLEWEKFMKRYSRGYFRRSCIGILHIWYNDQLCRDMGCNPRRKNGFWADLFDVY GPSDYIDLFPKKE</aaseq>

Gene Sequence

<dnaseqindica>5660..6017#5206..5558#4928..5103#4570..4807#52..492#acaactcacacacagctcgtattttcctagcccagtagcccactagccggcatggagaagaagcgggtggtcatcgtcggcgccggcgtgagcggcctggcggcgtgcaagcaactgctggagcgcggctgccggccggtggtgttcgaggcggacaccggcctcggcggcgtgtgggcgcggacgccggagtgcaccgcgctgcagacgccgcggcccatgtaccagtactccgacttcccgtggccggagacggtgacggaggtgttcccggaccaccgccaggtgatggactacctcggcgcctacgctcgccgcttcggcgtgctcgactgcatcaggttcggccaccgggtggcggggatggagtacgtcggcgtcggcgaggaggctgtggcggcgtgggatgagtgggctgggaacggcgacgctttcggctccggctccggcgagtggcggctagaggtggtcgacggtgagggccatattgaggtgagaatttcgctactactacatccattttttaaacagacgacgccgttgactttttctcatatgttttaccattcgtcttatttaaaaattttatgcaaatgtataagatataaatcacatttaaagaactatgagtgataaagcaacccataacaaaataaattataattacgtaaattttttgaacaagacgaatggtcaaatatgtgagaaaaagtcaacggcgtcatctattaaaaaaaggagggagtactttgcatggaggaagtttccaaatttgcatttatcatattgtttggcctacatttatgacacataacaaacttattggaaaaaaataatttataagtggaagctttatacctgcgtcattaacgatctaaaagccaatagtaataaaaatagactgtaataaaaatctggaaaagggtacggtcaataaagctgaataaaataatatttattttcattttgtcaaaaattatatgtaaataattattaaaataaatactcttgtgcaaaggaattttcctaaatttgtatttcaaactttttatgtaggcatagaattttgtctttgatatttgaagttctgtcaaaataagttacgattttatcaacagttcgaaagctacacttattatttaaaacatgtaggcggacactttaattaatttattttaccgcgagcaatcaaaatcatatgtcagcagagaatgttcgcgtcgctagtaggagatatttatcagtatggaacaatttgtgtttctactaggagaaaagagacgcatagcgccaggaacaagggaaaaaggtcggggcgccgcatcatatcattttggataggcatggacagaggcagaatccgatgtgattcaatcagacgagcaatcttacacagaaacacagtaagggcatgcttagatctcacctcaatccaacgtggtgctacagtctacagcaaacatgtgctaatgataaattaattatgtttaataaattcatctgctagattactgacggatactgtaattagttgatttgttagtatcagaacaccctatgcaacaccctatataatacctgacgtgatacagtaaaactttaccccctaaatctaaacaccccctaatctagactagctaggtggcaccctttgtgcatgggcatgaaatgcaggcctgggccaggctagtatgacatctgcaccctaataaagaaacattatatgacacatcttatagtaaccttttttattgaaatggagggaataaatatatcggctcatgaatttatttatatgttaaataaataataagcagcatgatggattaccatttatttaacctataagcagttcacggatcgacctacttataccctaaaactattaatataaatgttgcagctagcatttaaaatttattcattaatatgtataattacctaaaactattatttatcaaccagtcatctttatcccatccatcttccacttatattcatcctttatttaataacagatattagagtagtttcttatctgttcaaaatatttatattcgcggatgtagggagtacatataaatatcattgtgtggcacagacgcacagtgctttggtttataggttacatccactgttagaaaaaaagcatttttcctgatgtgcgggtctttttttcgcagtcgaacatgacccttggagccaaatgaccgtctacaaaaatataaatcggggtaaagttggaccacttaagcggcgcctgtgaaaatgattttcgcaggcggaccacttcagcgacgcctgcgaaaatctattttcataagcgcaacttatatgatccgcctgcaaaaatcgtacctacccataaaaaatctagtcatccttatcctctcctctccaccactcatttccctccccctcctctctctctcactcagaaaaaaatcctcccagcagcctccctcctccccgcctccaccgtcggctccctcctcgccaccggcgggctcccttctcgacgatgacgacgatcacgatgccgcctccgcgcgccgccggctcccctcctcgccgccggcgtgctccttcctcgacgacgacgacgactgcgacaccgcctccgcgcgccgacggctccttccgccgccggccacgccgagcgacgacaacggctctcctcctccgctagcttccctcctcgccccctccgtcgccggccatgacgagcgacgacaacggctctcccccgccgccgctggcatccctcctcgccgcctccgccgtccgcttctcctcctcgccccctccgctgccggccacgacgagcgacgacaatggctcgcctcctctgccgcccgcttccctcctcaccgcctacgccaccggccacgacgggcgacgacgacggctcgcatccggccgccggctctcctcgtcgatgcaacgacgatgacgacggcacttatgcagcggctcggctcctccctctcctatgtgggagcagtggatggaggagagccgtggccggagggtgaagccccgcctgcgaaaactgttttggaccgcctggaaaaaatctttttcctagtagtgatcttgtctcgttgttatcgttttattaggttagaaaccatcagtgcgatacataagaaagttgacatgtacttatatggtttttacggcagtttggcactattatatatcctactagtgaaaccgcaatatagaaaatgaaataacctaaagcttcaacaaatatatcccctaggtatataggccatcaaacgtactccctccatcccaaaatataagcatttttagttatgaatctggccaaaatataagcatttttagctaatccagattcattgctaaaagttgttacattttgagacaagttaattaaagaaattaagtggtaatagtaattgatgcagctactttccttaagaaaaaagtaaaagccgtaacttccttcgaaatctattttttcatcctaagttacaaaaccagttctctctcgctttcaacttttaagaaacaaaagcacatgacaccataaaacatatttcaacgttgatcaacgttaacgtggtttgatcaaggttccagtggttttcaccttcaaacttttaaaacctactaacatttactataccctgaaacatatttcaatatgctttctattgatatggaagtggtttgaagtgtttaaagtatgttcgcatgtggatgatgggaacatactgcctccgcatggaaaacggagcgatccattagcacgtgattaattaagtattagctaatttttttaaaaaaaatagattaatttgatttttttaagcaactttcgtataaattttttttgcaaaaaacacaccgtttagcagtttgaaaagcgtgcgcgtgaaaaaactagggatttgggttgggaacctagaggtccgaacacaccctaaacagttcgctgtgtcctgcgattctacgaccagagtccgtcgatcgcaacttgattcctagcccaaagtcacggcaatatttctgatgtcttatcctctctgacattgagcagtctcagtgcttttcttcgatatagatcattcctttataacctggtggtcaccatccaaagaaaaaaaacaaggtgttcaccatcaacaaagatcctggaatgggctagctctgctggttgcgaaagaggcaaccgtgcaatttgtggcgcacagcgggggcatcgctgtctagcgcgagacatccaattgcacaaatcgcagcatccatgccgagagagatccattggctaatgtgtttatttttctttgttttgccttttttttacataaaaattaaatttattatattcatatccactaatatttactcgatcttgattatacttttgtatcacataaatgatattctaatacagtaattcttggtcaaaatcttgtcctaatataaaacaaaatatgcaccatattttaaaacaaaggaagtaatataattcatcatagttatccctaaattaatttagtcacacatttgttactcaaacttctcatattccagacacacaaggcggattttgtcatactttgtattgggaggttcagtggagtgcccaacataccaacatttcctccaggcaaaggtccagaagcatttgatggccaggtgatccactccatggattactccaagatgggcaccaagaattctaaggaaatgatcaagggcaagcgtgtcacgatcgttggctacctcaaatcagcacttgacattgctgcagaatgtgcagaagtaaatggtactgacaaattaacaatctgatttcctccaaccatttttttcagtattttttctcttgtgcaactttagatgctgaattaaattttccccacttactaagtgtttcttcttcgtgtaggtactgagattccatgtacaatggtggtccgaacaaagcattggatcataccagactattttgcatggggcgtccacatctcaaagctgtatcttaatcggttttctgagcttcttattcacaagcctggtgaaggcttactccttagcatcttggccaccctcttgactccattggtatggcaattctgttttaattatactgctaaaatttgctttctctggttaaattgaagcaagactgatccatgcatgtttttcctctttgcacatgttcagagatggatattttcgaagtttgcagaaagctattattccattccaatgaagaagtatgacatggtgcctgaccatagcctatttgaggctttgattacatgcttggttgccattacacccaaagaccattacaagagattagaagaaggcagcattgttctgaagaaatcaaagacatttagcttttgcaaggaaggtgtgcttgtcgaaggccaatcttcgccgataaagagcgatatagtgatctttggaactgggttcagaggggatcagaagatcaaggagatgttcacttctgaatactttcagagcattgcagtaggctctgcatctacaactgtacctctctacaggtcaactcaacaattgttttttgcaaggaacaaatatttaattagtacaatttccaaattctatcttggactgttgaacttaatttgctgcatgaacacagggagatcattcacccaaagatcccgcagctcgcggttatcggctattcagagagcttggcaaatctctacacatcagaattacgggccaagtggctggcacatttcatggatggtggcttcaggttgccaagcatcagtgtgatgcagaatgatgtcctggaatgggagaagttcatgaagcgctattctcgtggttactttcgcagatcctgcatcggaatccttcacatctggtacaatgatcagctatgccgggacatggggtgcaatccgaggaggaagaacggattctgggctgatttattcgacgtttatggccctagtgattatattgatcttttccccaagaaagagtagtactttcgactcggagtcgtgtggaataaatttatcgcctgatcatgcttgttttaaggttgtcactacctggtttcttggatttctgctgttttgcatagtgcaaattcagtaaaccgtgtgaagtgtaaggtacagttgtgtaatataaggagatggattttaa</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0223500, RefSeq:Os04g0223500