Os04g0223901

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Revision as of 11:00, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0223901| Description = FAD dependent oxidoreductase family protein| Version = NM_001186872.1 GI:297722874 GeneID:9267722| Length = 5319 bp|...")
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Gene Name

Os04g0223901

Description

FAD dependent oxidoreductase family protein

Version

NM_001186872.1 GI:297722874 GeneID:9267722

Length

5319 bp

Definition

Oryza sativa Japonica Group Os04g0223901, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:8255629..8260947

Sequence Coding Region

8255629..8255986,8256098..8256450,8256553..8256728,8256842..8257079,8260507..8260947

Expression

GEO Profiles:Os04g0223901

Genome Context

<gbrowseImage1> name=NC_008397:8255629..8260947 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:8255629..8260947 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagaagaagcgggtggtcatcgtcggcgccggcgtgagcggcctggccgcgtgcaagcaactgctggagcgcggctgccggccggtggtgttcgaggcggacaccggcgtgggtggcgtgtgggcgtggacgctggagggcaccgcgctgcagactccgcggcccatgtaccagtactccgacttcccgtggccggagacggtgacggaggtgttcccggaccaccgccaggtgatggactacctcggcgcctacgcgcgccgcttcggggtgctcgactgcgtcaggttcggccaccgggtggcggggatggagtacgtcggcgtcggcaaggaggatgtggcggcgtgggatgagtgggccgggaatggcgacgcttttggctccggctccggcgagtggcggctggaggtggccgacggtgagggccatcttgagacacacactgcggattttgtcattctttgtgttgggaagtacagtggagtgcccaacataccaacatttcctgcatgcaaaggtccagaagcatttgatggccaggtgatccactccatggattactccaagatgggcaccaagaattgtaaggaaatgatcaagggcaagcgtgtcacgatcgttggctacctcaaatcagcacttgacattgctgcagaatgtgcagaagtaaatggtactgagattccatgtacaatggtggtccgaacaaagcattggatcataccagactattatgcgtggggcgtccccatctcaaagctgtatcttaatcggttttctgagcttattattcacaagcctggtgaaggcttactccttagcatcttggccaccctcttgactccattgaggtggatattttcgaagtttgcagaaagctattattccattccaatgaagaagtatggcatggtgcctgaccatagcctatttgaagctttgattacatgcttgattgccattacacccaaagaccattacaagagattagaagaaggcagcatcgttctcaagaaatcaaagacatttagcttttgcaatgaaggtgtgcttgttgaaggcgaatcttcgccgataaagagcgatatagtgatctttggaactggattcagagggggacagaagatcaaggagatgttcacttctgaatactttcagagcattgcagtaggctctgcatctacaactatacctctctacagggagatcattcaccctaagatcccgcagctggcggttatcggctattcagaaagcttggcaaacctgtacacatcagaattaagggccaagtggctcgcacatttcatggatggtggcttcaggttgccaagcatcagtgtgatgcagaatgatgtccaggaatgggagaagttcatgaagcgctattctcgtgcttactttcgcagatcctgcatcggattccttcacatctggtacaatgataagctatgccgggacatggggtgcaacccgaggaggaagaatggattttgggctgatttattcgacgttcatggccctgttgattatattgatcttcaccccaagaaagagtag</cdnaseq>

Protein Sequence

<aaseq>MEKKRVVIVGAGVSGLAACKQLLERGCRPVVFEADTGVGGVWAW TLEGTALQTPRPMYQYSDFPWPETVTEVFPDHRQVMDYLGAYARRFGVLDCVRFGHRV AGMEYVGVGKEDVAAWDEWAGNGDAFGSGSGEWRLEVADGEGHLETHTADFVILCVGK YSGVPNIPTFPACKGPEAFDGQVIHSMDYSKMGTKNCKEMIKGKRVTIVGYLKSALDI AAECAEVNGTEIPCTMVVRTKHWIIPDYYAWGVPISKLYLNRFSELIIHKPGEGLLLS ILATLLTPLRWIFSKFAESYYSIPMKKYGMVPDHSLFEALITCLIAITPKDHYKRLEE GSIVLKKSKTFSFCNEGVLVEGESSPIKSDIVIFGTGFRGGQKIKEMFTSEYFQSIAV GSASTTIPLYREIIHPKIPQLAVIGYSESLANLYTSELRAKWLAHFMDGGFRLPSISV MQNDVQEWEKFMKRYSRAYFRRSCIGFLHIWYNDKLCRDMGCNPRRKNGFWADLFDVH GPVDYIDLHPKKE</aaseq>

Gene Sequence

<dnaseqindica>4962..5319#4498..4850#4220..4395#3869..4106#1..441#atggagaagaagcgggtggtcatcgtcggcgccggcgtgagcggcctggccgcgtgcaagcaactgctggagcgcggctgccggccggtggtgttcgaggcggacaccggcgtgggtggcgtgtgggcgtggacgctggagggcaccgcgctgcagactccgcggcccatgtaccagtactccgacttcccgtggccggagacggtgacggaggtgttcccggaccaccgccaggtgatggactacctcggcgcctacgcgcgccgcttcggggtgctcgactgcgtcaggttcggccaccgggtggcggggatggagtacgtcggcgtcggcaaggaggatgtggcggcgtgggatgagtgggccgggaatggcgacgcttttggctccggctccggcgagtggcggctggaggtggccgacggtgagggccatcttgaggtgagaatttcgctacggctttgcgtggaggaagtttccaaatttgctggaaaaaaataatttataagtaaaaccttatgcatgtgtcattaacaatttaaaagcaaataataaaaatcttaatcttaactaattaaaatattcgtaattttctgttcgtcgcaagtccgtcggcggtgcgccttcgcagcccccgaatccgaattggataaggaaaacactttccaaaatcggcacaaccgaatcagatgcacacaccgcaaggaaaagaacaaaacctaaccaatctttgcccccaaaaaatcaaccacaatcatcacaaaatcacaaaataatcatccaagaagaacaacaatatacaccacaaacttcactcgcctgccaccggatccgccctcggccatcgccaccgtggccctcggccgttgccaccgctgccctcggccgttgctaccgccactgggtccatccgcggccgccgccgacaccaccaccgccgccggagggagaagagaggcggcggagggagccgccgctaccggatctgcccaccgccactgttaatggatccacccgcggacgccgccaacgccgccaccaccgtcggatcgaccgcgggacttggcgagagggggcggagggagccaccgccgcttgatccgcctgcggaggccgccgccgccggcggatctgccacaggaggaaggctagaggggatggagggagccgccgccaccaccctcggattcgcccgcgaccgccgtcaacccgcgccaccgcgggagggaggcgaggaggagaggaggagggagcgaggaggcgagacaggacaaagggagcggccgccggcgaggaaagcgagacaggtcggagggagccgccgccgccgctcgcggggagagggggaagggcaccgccgcagccgctcgtggtagggaggagggcgggcgccggaaccgccgccatcgcttttcgatcaagagagagagaagggatcgtgggcgcggagggtggaatgaattttagggttatggttttggctacagatatttatcttggctgggatcaatctggaccgtccattcgatcggacggctgcgtcttctcccgcatcgggccaccggactgttgggcctctaaatgagccgcaattaaaatcaatgttttctctcttagtaattttaagcatctttctattatcagaaatagcattaataccattttttttgcgagggacattaataccattttaattgtttatgactgcttattaatttaattccaactaaattgaataaactaaaattttggatagatttttctcatgatatggatttatttgtcgactaaaaatgtaaatatttatttgtcatgatatagaatttaaatgtagactaaaattaaataatattaattattttttaattttatatggactctattcttcttccaatattcctattttttattgttctaattagttttctatatggactctaaactcttctttcaatatttttttattttgaattttaattctttttctaaattatattcctatatgcactctaggctcttttggagaatattctagactcctcatccaatattatttaatttataatttatactttatattaagttgtattatttatatagatagattaatttattcagtttagttttttttttggcaaaagatttgttttatgcatatatccaattggatagcgtgatttttttaaaaaaaacaaaatgaatgagtcattgtgatggggaataggtcccgatgttccgataggtattgataaacagtcgatttgggcggagtcgtgacacaactcgatccggcttttgaacgaacacgctactgagccccgcaatcacagcatcacatctcctctggttatcaaccgtgccaaaactcggttgacctcgccgagaaggctaattcctgcatgcgaatcgaagaacacaagcaaaagcaagatagattgcaaccaaattgcatatgaatgattaagcattcgaatttggggttccacaaactgatctagcggcgaaactgttcttgacagattaatctaagcaaacctaactctaaacgatgacagctactgaataaatatgattagggacgtcctaggtttgccctagggcgcacacccccttgggttaagcccacgacataattacaagacccaaaactcaaatcagattcaaactggataagatacgtggctttgttttgtagatttccgacagctcggtaggaattttgacgtggaaccaaaaccatttgaaagtagactccataagatttccaacaagtactcatggccccgaaattccttctagatcagagactaggtccgtttgaagttgatgctgtcaggaggcccgaatccgaatccaaaacgtgtagaactttatctcttgtcttctatggaccaaaagtgatgtggtgagatggaagtggacttgagaaaatcttggtttggtccccaatcaacttctttaatcatccatgcattcattacgctcggtctcttttctttcacccaagcaagtacctctgcaaacgaaaacacacgaaacacattatgtagcaacgcttgttcaaatatataacaagtaaatctaatatagaacatatgcacctttgattaattaatacataagttaatcatggttatatccaagctagtttgtgtcctcatcacattgtctacaatgagttctcctcattttttatattttactccaactaatatgagaaatctagaccataagagataacgtggatgcttctttttctgttactttactaagttaataacattagtttttcatgttgcaacgcactattgaataataatttattattagctactatattactctctatcatttgagactttttctaacgagcaaaagtaccaaagcagtgtgaaagtaacttcggttaaaaataaaatatttttagttttaatacaccgtagcgaaaagacactttctagttaactatgataaaatcttaaaaagtcaaactatgggaagggtatggtcagctggttccgaaagaggcaaccttgtggcgcgcaggggcggatcactttctagcgcgagacatccaatcgcccagtcccatcatccatgccgatcgagagatagccattggctaatgtgtttctttctttttgttttgcctttctattttttacataaaattaaatttataaaattcatatccaaaagtctttattctcaactatatatactttcgtatcacatatataagtaatattgcaattcttggttaaaataggcaccgtgttttgaaagaaagggagtacaatataattcatcatagtttccttatccctaaattaagtgacatttgacactcgaatttctcatattccagacacacactgcggattttgtcattctttgtgttgggaagtacagtggagtgcccaacataccaacatttcctgcatgcaaaggtccagaagcatttgatggccaggtgatccactccatggattactccaagatgggcaccaagaattgtaaggaaatgatcaagggcaagcgtgtcacgatcgttggctacctcaaatcagcacttgacattgctgcagaatgtgcagaagtaaatggtactgacaaattaacaatctgatttccatcaaccaatttttcagtattcttttcccttgttagatgctgaattagaatttccccacttattaagtgtttcttcttcgtgtaggtactgagattccatgtacaatggtggtccgaacaaagcattggatcataccagactattatgcgtggggcgtccccatctcaaagctgtatcttaatcggttttctgagcttattattcacaagcctggtgaaggcttactccttagcatcttggccaccctcttgactccattggtatggatattctgttttaattatattgctaaaatatactttctctggttaaattgaagcaagactgatccatgcatgttttccttctttgcacatgttcagaggtggatattttcgaagtttgcagaaagctattattccattccaatgaagaagtatggcatggtgcctgaccatagcctatttgaagctttgattacatgcttgattgccattacacccaaagaccattacaagagattagaagaaggcagcatcgttctcaagaaatcaaagacatttagcttttgcaatgaaggtgtgcttgttgaaggcgaatcttcgccgataaagagcgatatagtgatctttggaactggattcagagggggacagaagatcaaggagatgttcacttctgaatactttcagagcattgcagtaggctctgcatctacaactatacctctctacaggtcaactcaataactgtttcttgcaaggagcaaaaatttaatttgtacaatttccaatttctatccaggactgtgtcgtagttaattaatttgctgcatgatttctcacagggagatcattcaccctaagatcccgcagctggcggttatcggctattcagaaagcttggcaaacctgtacacatcagaattaagggccaagtggctcgcacatttcatggatggtggcttcaggttgccaagcatcagtgtgatgcagaatgatgtccaggaatgggagaagttcatgaagcgctattctcgtgcttactttcgcagatcctgcatcggattccttcacatctggtacaatgataagctatgccgggacatggggtgcaacccgaggaggaagaatggattttgggctgatttattcgacgttcatggccctgttgattatattgatcttcaccccaagaaagagtag</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0223901, RefSeq:Os04g0223901