Os04g0229100

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Revision as of 11:01, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0229100| Description = Similar to Sinapyl alcohol dehydrogenase| Version = NM_001058825.1 GI:115457379 GeneID:4335223| Length = 2032 bp| D...")
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Gene Name

Os04g0229100

Description

Similar to Sinapyl alcohol dehydrogenase

Version

NM_001058825.1 GI:115457379 GeneID:4335223

Length

2032 bp

Definition

Oryza sativa Japonica Group Os04g0229100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:8688707..8690738

Sequence Coding Region

8688903..8689102,8689206..8689359,8689820..8690456,8690550..8690641

Expression

GEO Profiles:Os04g0229100

Genome Context

<gbrowseImage1> name=NC_008397:8688707..8690738 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:8688707..8690738 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggtcacccccaaccacacgcagaccgtctccggctgggccgccatggacgagtccggcaagatcgtgcccttcgtcttcaagagaagggagaacggggtggacgacgtgacgatcaaggtgaagtactgcgggatgtgccacacggacctgcacttcatccacaacgactgggggatcaccatgtacccggtggtgccggggcacgagatcaccggcgtggtgaccaaggtgggcaccaacgtggccgggttcaaggtgggcgaccgcgtgggcgtggggtgcatcgcggcgtcgtgcctcgactgcgagcactgccggcggtcggaggagaactactgcgacaaggtggcgctcacctacaacggcatcttctgggacggcagcatcacctacggcggctactccggcatgctggtggcgcacaagcggttcgtcgtgcggatcccggacaccctcccgctggacgccgcggcgccgctgctgtgcgcgggcatcacggtgtacagccccatgaagcagcacggcatgctgcaggccgacgcggccggccggcggctcggcgtggtcggcctcggcggcctcggccacgtcgccgtcaagttcggcaaggcgttcggcctccacgtcaccgtcatcagcacgtctccggccaaggagcgcgaggccagggagaacctcaaggccgacaacttcgtcgtcagcaccgaccagaagcagatgcaggctatgacgaggagccttgactacatcattgacacggtcgcggcgacgcactctctgggtccgatcctggagctgctcaaggtcaacggcaagctggtgctcgtgggcgcgccggagaagcccgtcgagctcccttccttccctctcatcttcggtaagaggacggtgagtgggagcatgacgggtgggatgaaggagacgcaggagatgatggacatttgcggggagcacaacatcacctgcgacatcgagatcgtgtccacggacaggatcaacgatgcgctcgccaggttggcgcgcaacgacgtccgctaccgcttcgtcatcaacgttgggggcgactccaagctctag</cdnaseq>

Protein Sequence

<aaseq>MEVTPNHTQTVSGWAAMDESGKIVPFVFKRRENGVDDVTIKVKY CGMCHTDLHFIHNDWGITMYPVVPGHEITGVVTKVGTNVAGFKVGDRVGVGCIAASCL DCEHCRRSEENYCDKVALTYNGIFWDGSITYGGYSGMLVAHKRFVVRIPDTLPLDAAA PLLCAGITVYSPMKQHGMLQADAAGRRLGVVGLGGLGHVAVKFGKAFGLHVTVISTSP AKEREARENLKADNFVVSTDQKQMQAMTRSLDYIIDTVAATHSLGPILELLKVNGKLV LVGAPEKPVELPSFPLIFGKRTVSGSMTGGMKETQEMMDICGEHNITCDIEIVSTDRI NDALARLARNDVRYRFVINVGGDSKL</aaseq>

Gene Sequence

<dnaseqindica>1637..1836#1380..1533#283..919#98..189#gtatatagtcctaaccaacagtcaggaacagcaacaaaagtaagccaagaatctctctgcctcccaccaacaaccacacacactcacagctttggtcatggaggtcacccccaaccacacgcagaccgtctccggctgggccgccatggacgagtccggcaagatcgtgcccttcgtcttcaagagaaggtataaagaaatgagcaagaagtgattgatatttggatagatttagatgtagcttgttgttgagaatgagatttattgcatgggtggttgcagggagaacggggtggacgacgtgacgatcaaggtgaagtactgcgggatgtgccacacggacctgcacttcatccacaacgactgggggatcaccatgtacccggtggtgccggggcacgagatcaccggcgtggtgaccaaggtgggcaccaacgtggccgggttcaaggtgggcgaccgcgtgggcgtggggtgcatcgcggcgtcgtgcctcgactgcgagcactgccggcggtcggaggagaactactgcgacaaggtggcgctcacctacaacggcatcttctgggacggcagcatcacctacggcggctactccggcatgctggtggcgcacaagcggttcgtcgtgcggatcccggacaccctcccgctggacgccgcggcgccgctgctgtgcgcgggcatcacggtgtacagccccatgaagcagcacggcatgctgcaggccgacgcggccggccggcggctcggcgtggtcggcctcggcggcctcggccacgtcgccgtcaagttcggcaaggcgttcggcctccacgtcaccgtcatcagcacgtctccggccaaggagcgcgaggccagggagaacctcaaggccgacaacttcgtcgtcagcaccgaccagaagcagatgcaggtaattacatacgaatatacgattgaactccaaggcaacctcatcatgtgcacgcataagattaattagttttttttaaaaaaaaacgaaccgatcgcaaacgtgtcaatttcattggaaataataggagtaaaagttatcaatacaagtatgaaaaaaacctactatatgagaagtaagaacactacgacagcataataagcgagatgtgctttgcccctgctatcgctcaagttctgccttccttaatctctgctcctaacgatgtgaaaaaaagaaaaaggctctttgcgctgaaaactccccggggttatccgctctccttccaaacctctcacgcgaggattagtgtgtggaattcttttttcggaagttctttagccgtcattcaagattagtggagtactaatttaattaagcactgaactagttaattacttaatttactgcaataaattaggctatgacgaggagccttgactacatcattgacacggtcgcggcgacgcactctctgggtccgatcctggagctgctcaaggtcaacggcaagctggtgctcgtgggcgcgccggagaagcccgtcgagctcccttccttccctctcatcttcggtgagcatttgagcaatcacccatcaagttaatttaattactactacgctacttagtagtatctgccaactaatcaatcaattaattcgtgggttgcgtgcaggtaagaggacggtgagtgggagcatgacgggtgggatgaaggagacgcaggagatgatggacatttgcggggagcacaacatcacctgcgacatcgagatcgtgtccacggacaggatcaacgatgcgctcgccaggttggcgcgcaacgacgtccgctaccgcttcgtcatcaacgttgggggcgactccaagctctagactcatgctactatcatattgctacctagtaccaacctccatgcctttcttaatttaatttattggaggctctgcacgcagaatgggacagttcgagctgtcgttttctcgttggccacgtgaagtaactgtacgcactttgtacttattcgagaaatgatcagtgataaatcatcaatggccttattttattctt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0229100, RefSeq:Os04g0229100