Os04g0233400

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Revision as of 11:01, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0233400| Description = Similar to Arabidopsis thaliana (Fragment)| Version = NM_001058827.1 GI:115457383 GeneID:4335226| Length = 1583 bp| ...")
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Gene Name

Os04g0233400

Description

Similar to Arabidopsis thaliana (Fragment)

Version

NM_001058827.1 GI:115457383 GeneID:4335226

Length

1583 bp

Definition

Oryza sativa Japonica Group Os04g0233400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:8999755..9001337

Sequence Coding Region

9000115..9000234,9000318..9000458,9000564..9000859,9000948..9001239

Expression

GEO Profiles:Os04g0233400

Genome Context

<gbrowseImage1> name=NC_008397:8999755..9001337 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:8999755..9001337 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgaaggaggtgagcgaggagccggagcacgtgcggcccaaggactacaccgacccgccgccggcgccgctgttcgacgtcggcgagctccggctgtggtccttctaccgggcgctcattgcggagttcatcgccacgctcctgttcctatacatcaccgtcgccaccgtcattgggtacaaggtgcagtcgtccgccgaccagtgcggcggcgtcggcaccctcggcatcgcctgggccttcggtggcatgatcttcatcctcgtctactgcaccgccggcatctccggagggcacattaaccccgcggtgacgttcgggctgctgctggcgaggaaggtgtcggtgattcgcgcggtgatgtacatcgtggcgcagtgcctgggcggcatcgtgggcgtgggcatcgtgaagggcatcatgaagcaccagtacaacgccaacggcggcggcgccaacatggtggccagcggctactccaccggcaccgccctcggcgccgaaatcatcggcaccttcgtcctcgtctacaccgtcttctccgccaccgacccaaagcgcaatgcccgcgactcccacgtcccggtgctcgcgccgctgcccatcgggttcgccgtgttcatggtgcacctggccaccatccccatcaccggcacgggcatcaaccctgcccggagcatcggcgccgccgtcatctacaaccagaagaaggcatgggacgaccactggatcttctgggcggggccgttcatcggagcgctggcggcggcggcgtatcaccagtacatcctccgggcggcagccatcaaggcgctgggctccttccggagcaaccccagcaactga</cdnaseq>

Protein Sequence

<aaseq>MSKEVSEEPEHVRPKDYTDPPPAPLFDVGELRLWSFYRALIAEF IATLLFLYITVATVIGYKVQSSADQCGGVGTLGIAWAFGGMIFILVYCTAGISGGHIN PAVTFGLLLARKVSVIRAVMYIVAQCLGGIVGVGIVKGIMKHQYNANGGGANMVASGY STGTALGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPIT GTGINPARSIGAAVIYNQKKAWDDHWIFWAGPFIGALAAAAYHQYILRAAAIKALGSF RSNPSN</aaseq>

Gene Sequence

<dnaseqindica>1104..1223#880..1020#479..774#99..390#tctccgcatccatcagagaagagagaggtagagaagagagagcagagctaagctagctcagagtgagtagcgtgttgagcttgctgaagggagcggcaatgtcgaaggaggtgagcgaggagccggagcacgtgcggcccaaggactacaccgacccgccgccggcgccgctgttcgacgtcggcgagctccggctgtggtccttctaccgggcgctcattgcggagttcatcgccacgctcctgttcctatacatcaccgtcgccaccgtcattgggtacaaggtgcagtcgtccgccgaccagtgcggcggcgtcggcaccctcggcatcgcctgggccttcggtggcatgatcttcatcctcgtctactgcaccgccggcatctccggtccgtactagtaatgttttcttttgttactaaatagcttgaaacaatggcgtacgttgagctaaatttggccatgcgtggcgtgcaggagggcacattaaccccgcggtgacgttcgggctgctgctggcgaggaaggtgtcggtgattcgcgcggtgatgtacatcgtggcgcagtgcctgggcggcatcgtgggcgtgggcatcgtgaagggcatcatgaagcaccagtacaacgccaacggcggcggcgccaacatggtggccagcggctactccaccggcaccgccctcggcgccgaaatcatcggcaccttcgtcctcgtctacaccgtcttctccgccaccgacccaaagcgcaatgcccgcgactcccacgtcccggtacgtatctttataatcacaccacgccacctttgtactctccagggtccgtctcagctagccagctttactagtactacgtagcttacatgcttgtttgtgtaggtgctcgcgccgctgcccatcgggttcgccgtgttcatggtgcacctggccaccatccccatcaccggcacgggcatcaaccctgcccggagcatcggcgccgccgtcatctacaaccagaagaaggcatgggacgaccacgtaagctgctcacctctcactgcaacactctgttcttgtgttcatttcaccaagtgcttatgcctgcatatgcttaattgcagtggatcttctgggcggggccgttcatcggagcgctggcggcggcggcgtatcaccagtacatcctccgggcggcagccatcaaggcgctgggctccttccggagcaaccccagcaactgagcttagatggccatggctgctctgctgctgctggcctggttggacttggtcatatcgtttgcatgtgagggagtgtgtgtgagagagggtggggggtgccagtcagccaggtgcatgatttgttgtttccagcttaaattatcatcaccgttactgttgttaatcaaaccggtgggatttgttgtatgtatgtatgtactaccttgattaatttagtttcgcttgtttgtgtaaccggtgttagtaattattagagatacaaactgcttcggctttttaagttcagtcgaccacccttgtaaaaccgctgtaagaacttccaccaccaattgccatctgcttttgttgctgttggattgc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0233400, RefSeq:Os04g0233400