Os04g0254000

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Gene Name

Os04g0254000

Description

Similar to Dihydrodipicolinate synthase 1, chloroplast precursor (EC 4.2.1.52) (DHDPS 1)

Version

NM_001058857.1 GI:115457443 GeneID:4335317

Length

3446 bp

Definition

Oryza sativa Japonica Group Os04g0254000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:10108579..10112024

Sequence Coding Region

10108745..10108878,10110095..10110175,10110781..10111708

Expression

GEO Profiles:Os04g0254000

Genome Context

<gbrowseImage1> name=NC_008397:10108579..10112024 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:10108579..10112024 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcgctgctgatcgccagcacggggggcgcccaccgcctcgcgtggaaggacgccgccgccctgggacccgctccgcggctggcgcgaccttggcccgccgccgtggctgcaccggcgccgctgctcaggattagcagaggaaagtttgcattgcaggccatcacccttgatgattatcttccaatgcgaagtactgaagtgaaaaatcggacatcaacagctgatatcactagtctcagagtaattacagcggtcaaaaccccatatctgcctgatggaagatttgatcttgaagcatatgattcactgataaatatgcagatagatggtggtgctgaaggtgtaatagttggaggaacaacaggagagggccaccttatgagctgggatgaacacatcatgcttattggacatactgttaactgctttggtgctaaagttaaagtggtaggcaacacaggtagtaactcaacaagagaggctattcatgcaacagagcagggatttgctgtaggtatgcatgcggctctccatatcaatccttactatgggaagacctctatcgaagggttgatatctcattttgaggctgtcctcccaatgggtccaaccattatttacaatgttccatctaggactggccaggatattcctcctgcagttattgaggctgtttcaagtttcacaaacttggcaggtgtgaaagaatgtgttggacatgagagggttaagtgctacactgacaaaggtataaccatatggagtggtaatgatgatgaatgccatgattctaggtggaaatatggtgccactggagttatttctgtggctagcaaccttattcctggtctcatgcacgatctcatgtatgaaggggagaataagacgctaaatgagaagctctttcccctgatgaaatggttgttttgccagccaaatccaattgctctcaacactgccctggctcagcttggagtggtaaggcctgttttcagattaccatatgtacctcttcctcttgaaaagagggtagagtttgtccgaatcgttgaatctattggacgggaaaactttgtgggtgagaacgaggcacgggttcttgacgacgatgattttgtgttggtcagtaggtactaa</cdnaseq>

Protein Sequence

<aaseq>MASLLIASTGGAHRLAWKDAAALGPAPRLARPWPAAVAAPAPLL RISRGKFALQAITLDDYLPMRSTEVKNRTSTADITSLRVITAVKTPYLPDGRFDLEAY DSLINMQIDGGAEGVIVGGTTGEGHLMSWDEHIMLIGHTVNCFGAKVKVVGNTGSNST REAIHATEQGFAVGMHAALHINPYYGKTSIEGLISHFEAVLPMGPTIIYNVPSRTGQD IPPAVIEAVSSFTNLAGVKECVGHERVKCYTDKGITIWSGNDDECHDSRWKYGATGVI SVASNLIPGLMHDLMYEGENKTLNEKLFPLMKWLFCQPNPIALNTALAQLGVVRPVFR LPYVPLPLEKRVEFVRIVESIGRENFVGENEARVLDDDDFVLVSRY</aaseq>

Gene Sequence

<dnaseqindica>167..300#1517..1597#2203..3130#agtagtccagtacgatcacaagtccgacctaaactgctaaacaaatcttgcgcaccgcttattgccgccgcggcgcatcccccatcccccatcccctctgcactctcccctctccccacagcgagacgccaaaaccctagtccgttctttctccacggaggcgaggatggcgtcgctgctgatcgccagcacggggggcgcccaccgcctcgcgtggaaggacgccgccgccctgggacccgctccgcggctggcgcgaccttggcccgccgccgtggctgcaccggcgccgctgctcaggtcgttttcatctctcttggctactgctgccccttcccttttgatttttatccattcctcactgctgcgcggaatgatcgaccgggtgagacctggatggatgggatgtgcttttttttttttttttgagggaaggtccggagacccggcttctatttgaaagccatcacggcaaactgctggggatgccagcggatgggatgtgcttggtagtgttgattggggacttatggaataccatttttggttgatttgatatagattgcttcagctgcgcaatacagatgttggagcttgagagtctgtatggttcttacggaatgtgcagttattttcgttgatgcgcggattgcgactaagtttcccagagattatccatgagttaaatatcaactacatagggctaattctaaacctggaccgctgagtagtatagattcaagagttattgtgcaatactgaaaataggggatttttatatgattgtgcattctgtagcaattttagaggtattattttaatttgggagcaaacactaaaggaagtacattttagactagcaagtactagttggcttgaaatatgtcttgcaatcttaccgcacagagtttttcaaatggtagggagtataatttggattagcatctactacctccatttcatattataagtcatttttgactttttccctagtcaaatatgttcaagtttgactaagtttatagaaaaatatagctgcattttcaatacaaaacaaacacaccatcaaaatatattaaattttagttttaatgaaactaatttggtgttttagatgccgctaaatttttctgtaagcttggtcaaataagtttcacttggaaaaatgtcaaagcgacctatagtatgaaacagagggattacttggcaattgcaaacctgtttttatgaggtataacctgtgtgcatttcttgttagtccaagaaggctacattagtcttggtatattgcacttatttttattcatgatgccttatgctttgtaatgcgtgaattatccaaccaaatatatatgctaccatctcaattatttaggattttgtacttctgacgatttgtgcaacttcttttctgtcattttaaggagtgatgaaggatatttagctcatcaactcccccatattcattttctactttcatatgcaacacactaacacaagaagtactttcatacaggattagcagaggaaagtttgcattgcaggccatcacccttgatgattatcttccaatgcgaagtactgaagtgaaaaatcggtaatcttctcagtttggaaggaaagaattggttccttgttttatttatgtttccataagcttagctgaacattaagatgtcccgtaaactactttcaattgccacttttcagtcagaacttcacatgtccacatcccgttctaattgaatttttgtaaccaattttactttatcatgttccgaaatcatttattcccctgctgaattcaatgtgtaccatgccagcaccaaatctcttcataccttgtaccaaaatccgaaattgctacttagagccatacgtttgcttgtgtgctgttcactcgggtgatgtgtaacggtataagttggatactgacttactgaggacatgcttcatgtgtatcaagttcaggtcttatcaggaataatcattcacgcgttaaagagaaataagatgttcttgctatttccaattttgtgaaatgaaataatcctgtataatcttttggtaaatggtaacccaattttgtgcttggtaaatttgtaacttaataatcatgtgatcccttttttgcacatgggtatttcagtgcttgatacctatctgctgctgagatatgatcttcctttttctgatccgcaggacatcaacagctgatatcactagtctcagagtaattacagcggtcaaaaccccatatctgcctgatggaagatttgatcttgaagcatatgattcactgataaatatgcagatagatggtggtgctgaaggtgtaatagttggaggaacaacaggagagggccaccttatgagctgggatgaacacatcatgcttattggacatactgttaactgctttggtgctaaagttaaagtggtaggcaacacaggtagtaactcaacaagagaggctattcatgcaacagagcagggatttgctgtaggtatgcatgcggctctccatatcaatccttactatgggaagacctctatcgaagggttgatatctcattttgaggctgtcctcccaatgggtccaaccattatttacaatgttccatctaggactggccaggatattcctcctgcagttattgaggctgtttcaagtttcacaaacttggcaggtgtgaaagaatgtgttggacatgagagggttaagtgctacactgacaaaggtataaccatatggagtggtaatgatgatgaatgccatgattctaggtggaaatatggtgccactggagttatttctgtggctagcaaccttattcctggtctcatgcacgatctcatgtatgaaggggagaataagacgctaaatgagaagctctttcccctgatgaaatggttgttttgccagccaaatccaattgctctcaacactgccctggctcagcttggagtggtaaggcctgttttcagattaccatatgtacctcttcctcttgaaaagagggtagagtttgtccgaatcgttgaatctattggacgggaaaactttgtgggtgagaacgaggcacgggttcttgacgacgatgattttgtgttggtcagtaggtactaataagtgaattatgcaagtcccatgtacgttgatgaacatcgtttagttacattatgatagtttgcagtcttccttgtagacatttcagcactttttgatcacgcttgatcggttatcagtgtaatgggaatcgtaatcgggcttatttgtaccttaaatgataggtatattgagaataagctaagagatcatgtacattatccttattcggaaatgccctatacccttgtaccatttgtatatgcacccgtttctggttgtgataagggtgtcgcctaccggcggttactgcgtggtaattgagtttattgtgggg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0254000, RefSeq:Os04g0254000