Os04g0261400

From RiceWiki
Revision as of 11:01, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0261400| Description = Cytochrome c region domain containing protein| Version = NM_001058866.1 GI:115457461 GeneID:4335326| Length = 2896 b...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0261400

Description

Cytochrome c region domain containing protein

Version

NM_001058866.1 GI:115457461 GeneID:4335326

Length

2896 bp

Definition

Oryza sativa Japonica Group Os04g0261400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:10671751..10674646

Sequence Coding Region

10672024..10674336

Expression

GEO Profiles:Os04g0261400

Genome Context

<gbrowseImage1> name=NC_008397:10671751..10674646 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:10671751..10674646 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcggcggaggaggcggggggcgcgtcggcggaggcatcggggtcggggtcggcgccggccggtgcggcaatggtgccgggcggggaggaggcggcggcgaggaagcgctacgacgcgctgatgcaggtgcgtgccaaggcggtcaaggggaagggcgcctggtactgggcgcacctggagcccgtgctcgtaccgccgccgggttccggcgtgcctcccaaggctgccaggctgcggtgcgtgttgtgcgcggcgacgttctcggcgtctaacccgtcgcgcacggcctccgagcacctcaagcgcggtgcttgccccaacttcgccgcgcagcagggggccgctgcgcagccacaccaggcgatgaccgtgtccgcggcgtcgtccgtcgtgcccatctcgtccatcccgccgtcgtcgcagcgccgccactcgaccggtggcggtgggcggaagaggcacgcgctggctgccgcgtacgccgccgtggaggcggcggcctcccagcacgtggtcgtgggagacccttcctcttactcgccgacgccacccacgccgccggcgctgcccgcgccacggcaggtgctctccggtggccgcggtgacctgggcgctctcgcccggttggaggacagcgtgaagcggctcaagtcgcccgtggcgtcgccgggggcgatgctgccacggcagcaggccgaagcggctctcgcgctgctcgccgagtggtttctcgagtcgtcgggcagcgtctccctcgcctcggcagagcatcccaagctgaaagccttcctccgccaggttgggctgccggagctgtcacgggccgagctcgccggcgcccgcctcaacgcgcgcttcgccgaggctcgcgccgacgccgcggcgcgcatccgtgaggcgcggttctttcagctcgcggccgacgggtggcgcgaacaggtggtcaccctctccgtcaacctccccaacggcgcgtccgttttcgaacgcgccgtgcccacgccggctccggcatcgtccgactacgccgagcagcttatgctggaagccatctcatccgtctcggcctccagcgaactccaccattgcgccggcattgtcgccgaccgtttcggctcgaaggccctgcgcgatctcgagcacaagcacccgtggatgctgaaccttgcttgccaagtccatggcttgtcccgtctagtcagggacatggcccgtgagctcccgcttttccactccgcgtcggcgaactgcgccaagatggccgcctacttcaacgcggcgcccacggtgcgcgcgctgctgcacaagcaccaagtccaggagcacggtcacgccatgctcctccgcgtcgccgccccgccgttcgaccgcgccgcggcgttcgcaatgctcgaggacatcctgacctcggcgcggccgctccagctggcggtgcacgaggagtcgtacaagctggtgtgcatcgacgaccccgcggcgagggaggtcggcagcatggtgcagaaggtggcgttctggacggaggtcgaggcggcgcactcgctggtgaagctgatcaccgacatggtgaaagagatggaagctgagaggccgctagtcgggcaatgcctgccgctctgggaggacctgcgcggcaaggtgagaggctggtgccgcaagttcaacgtggacgagggcatcgccatgaacgtggtcgaggtgaggttcaggaagagctaccacccggcgtggtcagcggcgttcatcctcgacccgctctacctgatcaaggatgtcagcgggaggtacctcccgccgttcaagtacctgacgccggagcaggacaaggacgtggacaggctgatcacgcggctggtgtcgccggaggaggcccacctggcgctcatggagctgatgaaatggcggtcggaggggctcgacccgctgtacgcgcaggcggtgcaggtccggcagcccgacccgtcgacggggaagatgaggatcgctaacaagcagagcagccggctggtgtgggagacgtgcctcagcgacctcaagtcgctcggcaaggtggccgtgcggctcatcttcctccacgccaccgccaaggggttcaggtgcgcgccacccatgtcccgctggctcaccgctcccgggagctctgccgccggcattgcccgcgcgcagcgcctcgtctacgtggccgccaactcgaagctcgagaggagggacttctccaacgacgatgacaaggacctggagctgctcacggagggagacgatgacatgctaactgaggctactgccagtgtggatccctcttcagtgtag</cdnaseq>

Protein Sequence

<aaseq>MSAEEAGGASAEASGSGSAPAGAAMVPGGEEAAARKRYDALMQV RAKAVKGKGAWYWAHLEPVLVPPPGSGVPPKAARLRCVLCAATFSASNPSRTASEHLK RGACPNFAAQQGAAAQPHQAMTVSAASSVVPISSIPPSSQRRHSTGGGGRKRHALAAA YAAVEAAASQHVVVGDPSSYSPTPPTPPALPAPRQVLSGGRGDLGALARLEDSVKRLK SPVASPGAMLPRQQAEAALALLAEWFLESSGSVSLASAEHPKLKAFLRQVGLPELSRA ELAGARLNARFAEARADAAARIREARFFQLAADGWREQVVTLSVNLPNGASVFERAVP TPAPASSDYAEQLMLEAISSVSASSELHHCAGIVADRFGSKALRDLEHKHPWMLNLAC QVHGLSRLVRDMARELPLFHSASANCAKMAAYFNAAPTVRALLHKHQVQEHGHAMLLR VAAPPFDRAAAFAMLEDILTSARPLQLAVHEESYKLVCIDDPAAREVGSMVQKVAFWT EVEAAHSLVKLITDMVKEMEAERPLVGQCLPLWEDLRGKVRGWCRKFNVDEGIAMNVV EVRFRKSYHPAWSAAFILDPLYLIKDVSGRYLPPFKYLTPEQDKDVDRLITRLVSPEE AHLALMELMKWRSEGLDPLYAQAVQVRQPDPSTGKMRIANKQSSRLVWETCLSDLKSL GKVAVRLIFLHATAKGFRCAPPMSRWLTAPGSSAAGIARAQRLVYVAANSKLERRDFS NDDDKDLELLTEGDDDMLTEATASVDPSSV</aaseq>

Gene Sequence

<dnaseqindica>274..2586#aagataaacagtgtgttgtgtttgtgagagagaattagtggacttggagagagaatattactactcctactatcgctattgtgagatagagcgagagcgaaaaaagtgggagtagagtaaaaataccactcccctccatcggtccatcccatccagtagtagtagggtgttgtgtggcgcctctcgccgcgaaacgttcgaaaccccacgaaaacctccaagaaaaacgaacccaacctacgtaacgcgcggacatgacggccgcgtgacgccatgtcggcggaggaggcggggggcgcgtcggcggaggcatcggggtcggggtcggcgccggccggtgcggcaatggtgccgggcggggaggaggcggcggcgaggaagcgctacgacgcgctgatgcaggtgcgtgccaaggcggtcaaggggaagggcgcctggtactgggcgcacctggagcccgtgctcgtaccgccgccgggttccggcgtgcctcccaaggctgccaggctgcggtgcgtgttgtgcgcggcgacgttctcggcgtctaacccgtcgcgcacggcctccgagcacctcaagcgcggtgcttgccccaacttcgccgcgcagcagggggccgctgcgcagccacaccaggcgatgaccgtgtccgcggcgtcgtccgtcgtgcccatctcgtccatcccgccgtcgtcgcagcgccgccactcgaccggtggcggtgggcggaagaggcacgcgctggctgccgcgtacgccgccgtggaggcggcggcctcccagcacgtggtcgtgggagacccttcctcttactcgccgacgccacccacgccgccggcgctgcccgcgccacggcaggtgctctccggtggccgcggtgacctgggcgctctcgcccggttggaggacagcgtgaagcggctcaagtcgcccgtggcgtcgccgggggcgatgctgccacggcagcaggccgaagcggctctcgcgctgctcgccgagtggtttctcgagtcgtcgggcagcgtctccctcgcctcggcagagcatcccaagctgaaagccttcctccgccaggttgggctgccggagctgtcacgggccgagctcgccggcgcccgcctcaacgcgcgcttcgccgaggctcgcgccgacgccgcggcgcgcatccgtgaggcgcggttctttcagctcgcggccgacgggtggcgcgaacaggtggtcaccctctccgtcaacctccccaacggcgcgtccgttttcgaacgcgccgtgcccacgccggctccggcatcgtccgactacgccgagcagcttatgctggaagccatctcatccgtctcggcctccagcgaactccaccattgcgccggcattgtcgccgaccgtttcggctcgaaggccctgcgcgatctcgagcacaagcacccgtggatgctgaaccttgcttgccaagtccatggcttgtcccgtctagtcagggacatggcccgtgagctcccgcttttccactccgcgtcggcgaactgcgccaagatggccgcctacttcaacgcggcgcccacggtgcgcgcgctgctgcacaagcaccaagtccaggagcacggtcacgccatgctcctccgcgtcgccgccccgccgttcgaccgcgccgcggcgttcgcaatgctcgaggacatcctgacctcggcgcggccgctccagctggcggtgcacgaggagtcgtacaagctggtgtgcatcgacgaccccgcggcgagggaggtcggcagcatggtgcagaaggtggcgttctggacggaggtcgaggcggcgcactcgctggtgaagctgatcaccgacatggtgaaagagatggaagctgagaggccgctagtcgggcaatgcctgccgctctgggaggacctgcgcggcaaggtgagaggctggtgccgcaagttcaacgtggacgagggcatcgccatgaacgtggtcgaggtgaggttcaggaagagctaccacccggcgtggtcagcggcgttcatcctcgacccgctctacctgatcaaggatgtcagcgggaggtacctcccgccgttcaagtacctgacgccggagcaggacaaggacgtggacaggctgatcacgcggctggtgtcgccggaggaggcccacctggcgctcatggagctgatgaaatggcggtcggaggggctcgacccgctgtacgcgcaggcggtgcaggtccggcagcccgacccgtcgacggggaagatgaggatcgctaacaagcagagcagccggctggtgtgggagacgtgcctcagcgacctcaagtcgctcggcaaggtggccgtgcggctcatcttcctccacgccaccgccaaggggttcaggtgcgcgccacccatgtcccgctggctcaccgctcccgggagctctgccgccggcattgcccgcgcgcagcgcctcgtctacgtggccgccaactcgaagctcgagaggagggacttctccaacgacgatgacaaggacctggagctgctcacggagggagacgatgacatgctaactgaggctactgccagtgtggatccctcttcagtgtagtcagcagcataccacagcatccatcccctgatcccctgcctgattttaattggtttttcttttgtttttaattaattgctcccttttaatgttgcccttaattactagcatttgtagaatttgataactaggaattgttagattcttcaattttttttctctctattttgttttcttttcctttttttttacttgtcttgtgctcatgttgccagttcttgcttgctccctcctcttgttttggtggggtgggggtggtaggggcatgagattggagatcatttgcaccattaatttgctttgcgttgct</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0261400, RefSeq:Os04g0261400