Os04g0304400

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Revision as of 11:03, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0304400| Description = Similar to MADS-box protein AGL16-II| Version = NM_001058951.1 GI:115457631 GeneID:4335427| Length = 3175 bp| Defin...")
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Gene Name

Os04g0304400

Description

Similar to MADS-box protein AGL16-II

Version

NM_001058951.1 GI:115457631 GeneID:4335427

Length

3175 bp

Definition

Oryza sativa Japonica Group Os04g0304400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:13722829..13726003

Sequence Coding Region

13723012..13723193,13723786..13723864,13724079..13724140,13724530..13724629,13724719..13724760
,13724893..13724976,13725078..13725212

Expression

GEO Profiles:Os04g0304400

Genome Context

<gbrowseImage1> name=NC_008397:13722829..13726003 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:13722829..13726003 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggagagggaagattgccatcaagaggatcgacaacacgatgaaccggcaggtgaccttctcgaagcggcgcggcgggctgatgaagaaggcccgggagctggccatcctctgcgacgccgacgtcggcctcattgtcttctcctgcaccggccgcctctacgacttctccagctcaagcatgaaatcaataatagagcggtaccaggaggcaggagaggagcattgtcggttgctgaacccaatgtcagaggctaagttttggcagcgggaggttacaactttgaggcagcaagtgcaaaacttacaccacaacaacaggcaacttttgggagaggaaatctccaacttcacagttagagatctgcagcttctccagaaccaagttgagatgagcctacattccataagaaataaaaaggatcaacttttggcagaggagattctaaaactcaatgaaaaggggtctcttgttcaaaaggagaacagtgaacttcgcaagaagttcaacattgctcatcaacgcaacatagaattacacaagaagcttaactctggagaaagcacgtcaagtgagcaagttaccagaagctcaaaggatcccggagaatcgagtacaccccgtgattcacgtgtgtgtattgaccttgaattgagtcaaaaagaagttgaagatgaataa</cdnaseq>

Protein Sequence

<aaseq>MGRGKIAIKRIDNTMNRQVTFSKRRGGLMKKARELAILCDADVG LIVFSCTGRLYDFSSSSMKSIIERYQEAGEEHCRLLNPMSEAKFWQREVTTLRQQVQN LHHNNRQLLGEEISNFTVRDLQLLQNQVEMSLHSIRNKKDQLLAEEILKLNEKGSLVQ KENSELRKKFNIAHQRNIELHKKLNSGESTSSEQVTRSSKDPGESSTPRDSRVCIDLE LSQKEVEDE</aaseq>

Gene Sequence

<dnaseqindica>184..365#958..1036#1251..1312#1702..1801#1891..1932#2065..2148#2250..2384#gctatacgcatcttccctagcttgctaagctagctagtcttctccttcctttctcctcttcctcctcctcctcttcttctcaatcttgctcagcaaatcttgtcggggagagagagagagagatcagcaaggagaagagggaattaagctagatcgaggtagtcgtcgatcgatcgattgaagatggggagagggaagattgccatcaagaggatcgacaacacgatgaaccggcaggtgaccttctcgaagcggcgcggcgggctgatgaagaaggcccgggagctggccatcctctgcgacgccgacgtcggcctcattgtcttctcctgcaccggccgcctctacgacttctccagctcaaggttggtgattatcatcgtcgatccccttctatagttctatatgtatatagctgctacctgctaggtcatgaaatatatcccaatccttcagatttttgtctatatatctcgatgtgtccagctatctagcttttgctttactctagcttagggttttctttgattctttggatgatcttaaggtgaaagacttctgttttttttagaaaaaaataaagaaaatcgatgcatccatttagatcactccttctcccatctaaataatctctatacactattaatttgatgaattgtgtatgcatatattgactctttctgtttagtctggagcattattcctgaaagagaaggagatgcgcagtaggagctggtatgcaaggggctgccagaatgtgagaatatatttctagaaatggtgtatacgatttttctaagttaaataactcacaagttatctctagatatatatttattttgatttgtatattaatttacctcgtttcttagctgaaaatttaggttaatttcccctagatgcataaaacatttgctatatattggatcgtaatggtatagtcttcctttttgttagcatgaaatcaataatagagcggtaccaggaggcaggagaggagcattgtcggttgctgaacccaatgtcagaggctaaggtatgcattctaatataatggtagcaaatttgaggtaaattaaaaattcatttcttgaggtcatctggttttgcatacagctacaaaagttgttgactaaattgccgcactttgtcgtcataaactccattttcccaattcttaactaaaattcctatatattccaatgtcattatttgcaattatcctgacatttctacttatgtattggcagttttggcagcgggaggttacaactttgaggcagcaagtgcaaaacttacaccacaacaacaggtaaaatcaagtccaatgtcaatgatatattacacatacaaccatagctaattacacacctcttctcaagttttttttttacccaaatcttagcataaccagatgaactcaagaaatgaagtcccccgcctgggaaaatgctttctctagtagtgatgttgacctcactttctctctaaattagtttttacttgtctgcaaactatttaaacgaaaacagtgcatactactttattaggatcaaccaatatgaaggtgaaaatgaaatcttttttaaggcccatgtggaaattcatgtttcaaataaaaggtgaaaataccttttaatgcatgattaattctacgtgctatcaattctagtcacattcttatatgacgtacactgataggcaacttttgggagaggaaatctccaacttcacagttagagatctgcagcttctccagaaccaagttgagatgagcctacattccataagaaataaaaaggtataatattgataatacccttttctcgactaataaataaataatcttttcctaattaaatggcgatatatctattgtctctttactaggatcaacttttggcagaggagattctaaaactcaatgaaaaggttgtacttgcatcttcttcttcttgatgaaatagctcatgatttaattggtatcagttcttacatctatacactgttcatgattgaggtaaaattacacgaatatatatcgctctatacttttaattgtaggggtctcttgttcaaaaggagaacagtgaacttcgcaagaagttcaacattgctcatcaacgcaacatagaattacacaagaaggtaaagtttctattcgatctactcgaaacatacaaaaatgtcgtagaatattattgatatataaatatacaatttacatcatcttgattaattaatttcagcttaactctggagaaagcacgtcaagtgagcaagttaccagaagctcaaaggatcccggagaatcgagtacaccccgtgattcacgtgtgtgtattgaccttgaattgagtcaaaaagaagttgaagatgaataacacatgatcaagtgttaaaaacagtgagttttcaaatctttaattacgtaaaccgtaaaacctcgctcttgtaactaatatatatttcttcaatgtttaatcaaagttgtcagagttccttaccttttgctagtatcacaaaacaagtagctatttgtttgtgatactagctagtaatttgtgttaagctagctagtaacttgtgttaaactagctatataaattaagtcacaaaatacccataaattaagctagctagcccttcaaattttgttgtttttctctgattagttaatactatggtttctagctagctagctagctagcccttcaaattaagcactgtacagaacttgttaattttctactcatctttactagtataaattatgccactaattaagttcctagagttacttttcatgttcagaagttgcatgcatgcatggcaagttactttaattactgtgctcttgtttaaagaaaagtgttaactttattctaaaaaaaaagtgttaactttacagttacacagatatgtccctcattagaaggtgtaataaatctgtttgtttgcagacatgatggccagtaacttttgcagcatcacgcctactacaagcgcaagaaaagctagctactactggaacaagggatcttaatcatgttttgaaacttaattagtaatattttaaaaaatcgtactatactaatcatgatgtgtagcgtattgcaccactgaatttattactgtaattaacatggtgagtgttaaaatattttgtgatatc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0304400, RefSeq:Os04g0304400