Os04g0310700

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Revision as of 11:03, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0310700| Description = AMP-dependent synthetase and ligase domain containing protein| Version = NM_001186934.1 GI:297722998 GeneID:9267647| ...")
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Gene Name

Os04g0310700

Description

AMP-dependent synthetase and ligase domain containing protein

Version

NM_001186934.1 GI:297722998 GeneID:9267647

Length

1360 bp

Definition

Oryza sativa Japonica Group Os04g0310700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:14122795..14124154

Sequence Coding Region

14122892..14123120,14123365..14124152

Expression

GEO Profiles:Os04g0310700

Genome Context

<gbrowseImage1> name=NC_008397:14122795..14124154 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:14122795..14124154 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gtgtccaacctctgctcgtccatgttcgccgtggcgccggagacggccgggcaggtggtgacgctggggctcatgccgttcttccacatctacggcatcaccggcatctgctgcgccacgctccggcacaagggcacggtggtggtgatggaccgcttcgacctccgcacgttcctccgtgcgctcgtcgaccaccgcgtcatgttcgcgccgctggttccccccgtgatgctcgccatggtcaagagccccgtcgccgacgagttcgacctctccgacctcgccctcaagtccgtcatgaccgccgccgcgccgctcgcccccgacctcctcgccgcgttccagcgcaagttccccggcgtgcaggtggaggaagcctacggcctcaccgagcacagctgcatcaccctcacgcacgccgccggcgacggccacggccacgtcgccaagaagagctcggtggggttcatcctgccgaacctggaggtgaagttcgtggacccggacaccgggaggtcgctgccggcgaacacgccgggggagctgtgcgtgcggagccagagcgtgatgcaggggtactacaagaggaaggaggagacggagcgcacggtggacggcaaggggtggctgcacaccggcgacgttgggtacatcgacggcgacggcgacgtgttcatcgtggacaggatcaaggagctgatcaagtacaaggggtttcaggtcgcccccgccgagctcgaggccgtcctcctctcccacccctccgttgaggacgccgccgtcttcggggtgccggacgaggaggccggcgaggtgccggtggcgtgcgtggtgcggcggcacggtgcggaggagggggaggaggagatagtggcgtacgtggcggagagggtggcgtcgtacaagcgggtccgggtgctgcacatcgtcgacgccatccccaagtcggtgtccgggaagatcctgaggaggcagcttagggacgagttcatcaagaggatgaaaccgtcagcttga</cdnaseq>

Protein Sequence

<aaseq>VSNLCSSMFAVAPETAGQVVTLGLMPFFHIYGITGICCATLRHK GTVVVMDRFDLRTFLRALVDHRVMFAPLVPPVMLAMVKSPVADEFDLSDLALKSVMTA AAPLAPDLLAAFQRKFPGVQVEEAYGLTEHSCITLTHAAGDGHGHVAKKSSVGFILPN LEVKFVDPDTGRSLPANTPGELCVRSQSVMQGYYKRKEETERTVDGKGWLHTGDVGYI DGDGDVFIVDRIKELIKYKGFQVAPAELEAVLLSHPSVEDAAVFGVPDEEAGEVPVAC VVRRHGAEEGEEEIVAYVAERVASYKRVRVLHIVDAIPKSVSGKILRRQLRDEFIKRM KPSA</aaseq>

Gene Sequence

<dnaseqindica>1035..1263#3..790#tggtgtccaacctctgctcgtccatgttcgccgtggcgccggagacggccgggcaggtggtgacgctggggctcatgccgttcttccacatctacggcatcaccggcatctgctgcgccacgctccggcacaagggcacggtggtggtgatggaccgcttcgacctccgcacgttcctccgtgcgctcgtcgaccaccgcgtcatgttcgcgccgctggttccccccgtgatgctcgccatggtcaagagccccgtcgccgacgagttcgacctctccgacctcgccctcaagtccgtcatgaccgccgccgcgccgctcgcccccgacctcctcgccgcgttccagcgcaagttccccggcgtgcaggtggaggaagcctacggcctcaccgagcacagctgcatcaccctcacgcacgccgccggcgacggccacggccacgtcgccaagaagagctcggtggggttcatcctgccgaacctggaggtgaagttcgtggacccggacaccgggaggtcgctgccggcgaacacgccgggggagctgtgcgtgcggagccagagcgtgatgcaggggtactacaagaggaaggaggagacggagcgcacggtggacggcaaggggtggctgcacaccggcgacgttgggtacatcgacggcgacggcgacgtgttcatcgtggacaggatcaaggagctgatcaagtacaaggggtttcaggtcgcccccgccgagctcgaggccgtcctcctctcccacccctccgttgaggacgccgccgtcttcgggtaacacccttcttcttcttcttctctgaccgtcgaaacttcaagagttgattctggagtaaagttatggagcaatcaaaaccaagctttatatttctagtttattttgtgagatcatttcagccagcttcattctaattttgtatggagtttaaactttttagttggattttaattttaaaaagatggaattgtagatggagcttttgccatgtcctaaagccatgcatgcatggatatgcagggtgccggacgaggaggccggcgaggtgccggtggcgtgcgtggtgcggcggcacggtgcggaggagggggaggaggagatagtggcgtacgtggcggagagggtggcgtcgtacaagcgggtccgggtgctgcacatcgtcgacgccatccccaagtcggtgtccgggaagatcctgaggaggcagcttagggacgagttcatcaagaggatgaaaccgtcagcttgattaattaacagacataaatcattgtgattgatatcaagaaccgaaagcatgcaaggtgttaaattgcataaaaatggagttggataagtgtttcatc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0310700, RefSeq:Os04g0310700