Os04g0330400

From RiceWiki
Revision as of 11:04, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0330400| Description = Hypothetical protein| Version = NM_001186943.1 GI:297723016 GeneID:9269831| Length = 5405 bp| Definition = Oryza sa...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0330400

Description

Hypothetical protein

Version

NM_001186943.1 GI:297723016 GeneID:9269831

Length

5405 bp

Definition

Oryza sativa Japonica Group Os04g0330400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:15399848..15405252

Sequence Coding Region

15399848..15399852,15399894..15400112,15400145..15400275,15400373..15400458,15400525..15400626
,15400710..15400809,15401937..15401980,15402249..15402296,15402367..15402477
,15405226..15405252

Expression

GEO Profiles:Os04g0330400

Genome Context

<gbrowseImage1> name=NC_008397:15399848..15405252 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:15399848..15405252 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtgcatctccgcctccgtcaccaccgtcgtcgtcgccgagcgccgccacttccgccaccgcctcgccccgttgctgacgagcccgccgcccctgctgcgtgcttcgccgccgtcgccgacggtcggtgctccaccctccgttgcggctgccatcgaagaaacggcggtggtgacggagccggcgccaaggaaggcagtggttgcgtcgagaagaggaggaccaggagtagagttgcagagtgacgtggaagccggtggcacacaggagctagccgacgagcttgacaccgagcagcttgggctggagagcaagattatggccatcaggaacttcttggaaggaccccgaccatcccaaccgccccaacgacgtgctggtgaaatagtgagcttactgcaaaaccggctaaacatgaacatcaccttcaaggagctgcaggacggtcctgctgcggctcaacctccactggggccacatgctttgactggccatcatcagcagggtcatccagcctcctccgccggcgagggcgaccagcctttgcggctgccgcgagtccacgccgactgcgaggcggttaatgtcgatgacatgttcagcctgcgtagggatagccagatcggcaaggatcagtttcatgagtcgaggtctaatatggttgatcacagggccaatcttgtgcaggtggtcggctttcctccatgggacatggacagagctatcatccacaatgagagtggttacaaagattattacaccaacaatagggtgtcaaaaccgggtagaaaaaacaagggatcaaaacagccggaatcggtactgtctctacggaaatggccctcgacaaacgccaattatgcatctgtttga</cdnaseq>

Protein Sequence

<aaseq>MCISASVTTVVVAERRHFRHRLAPLLTSPPPLLRASPPSPTVGA PPSVAAAIEETAVVTEPAPRKAVVASRRGGPGVELQSDVEAGGTQELADELDTEQLGL ESKIMAIRNFLEGPRPSQPPQRRAGEIVSLLQNRLNMNITFKELQDGPAAAQPPLGPH ALTGHHQQGHPASSAGEGDQPLRLPRVHADCEAVNVDDMFSLRRDSQIGKDQFHESRS NMVDHRANLVQVVGFPPWDMDRAIIHNESGYKDYYTNNRVSKPGRKNKGSKQPESVLS LRKWPSTNANYASV</aaseq>

Gene Sequence

<dnaseqindica>1..5#47..265#298..428#526..611#678..779#863..962#2090..2133#2402..2449#2520..2630#5379..5405#atgtggtcgggggacggggatctgacatcccccgtgcgccgggcagcatctccgcctccgtcaccaccgtcgtcgtcgccgagcgccgccacttccgccaccgcctcgccccgttgctgacgagcccgccgcccctgctgcgtgcttcgccgccgtcgccgacggtcggtgctccaccctccgttgcggctgccatcgaagaaacggcggtggtgacggagccggcgccaaggaaggcagtggttgcgtcgagaagaggaggaccgtacgtcgccaggcggctccggctttctctagaggagtagagttgcagagtgacgtggaagccggtggcacacaggagctagccgacgagcttgacaccgagcagcttgggctggagagcaagattatggccatcaggaacttcttggaaggaccccgaccatgtcctccgtgatcccatttttactttctcgcagaatatgctccaaatatgcaactttcttgacatgaactgtgcatgttttttgtgttttgtctcagcccaaccgccccaacgacgtgctggtgaaatagtgagcttactgcaaaaccggctaaacatgaacatcaccttcaaggagctgcaggtaaagcttttttgtccttctgttaattttattcctaagcacgtttgcttttctcatcgggggtaggacggtcctgctgcggctcaacctccactggggccacatgctttgactggccatcatcagcagggtcatccagcctcctccgccggcgagggcgaccagcctgtactgcaggcttggaccgccgtaggggactgcgggcgccatggaggggccgtgctgtccctgtgaccaatggacgatgacagttgcggctgccgcgagtccacgccgactgcgaggcggttaatgtcgatgacatgttcagcctgcgtagggatagccagatcggcaaggatcagtttcatggtaattttttcttgcagctcctccctgtcagcatcttcttcctctaatctattctagattttcagtgtatcaacatgattgatttcgcagccaaatataatccattccttccgtcccactcctattaaaaagcttgacctttttaccaaccgatgtcatgttgttagccacatcctgttcttagtttttctaattgtccattctctcattgggttatgttaaatatttttgaacgggttacgaattttgcaatatagtactaataaaacacataacgtctctccttttgtggagttgtctgattattatctaggatcattcactgttaggcctcaacacatttttttaattcctccataatgtgagagatactaatgactgttctcaagcagtaaaggaaaaccacatatttagattagttagccttccttttctactcttctcccgccatgtattgtttagtttatagaggagatcagatggacatatgctaccaagtctgtcatttcaagttctaaaaaaaaagtcggatcatttcagtggtagttgggcaaaaatatctgttggcatgcgagaacttttgcctacttattttaagaatgtttttgaaacctaattaggctataactcatctatcttggaatgtcctatttgttatatttagcgttgttttcattactcactgatgaaaaatttaggcaggggtgcatggattcacatgtttggaatgagatcatgaaaggatagatggcatcccaaggaactgaagaaaaacaaaaaactgtaggatcagcaatagcagttagagaggctttctggttttttgaaagggtattttagaagtttactcaagctgaggttttggatacagttaagcatttcataaacctttctgatgtgctaatacactccacatgtaaatatagaaagttactataatggacttttccaattgtagctatagctgagtgctaataccataaatttgcaggtactaatgaatacataatgaattgatctacccctccactcaaagcctcaaatcatgtcgctccatacaagtcgaatggccttgacaaggcatcagagatatcggtttgttcggattctgctgatcaaagttttagagtcgaggtctaatatggttgatcacagggccaatcttgtgcaggtatcacagaacatgtttcaggcattatcttatcacatattccatatgcttatattatcatcctttttttggcataaatgcttgtaccatattaccagtagacatctgctagcccactagaatctcttgatggagacgttaaaaccgccatggatgatcatttagttgtctgtttctgcttctgccgacataaagaaaatcacaagttcactaaacatctcccacctgtggtgactgagaaataggagctcaactgcacctgcttcaggtggtcggctttcctccatgggacatggacagagctatcatccacaatgtagaaaaaaaattaatattagctgggttagatgaaggacaaggccaactaaatttcattaatattttaggagagtggttacaaagattattacaccaacaatagggtgtcaaaaccgggtagaaaaaacaagggatcaaaacagccggaatcggtactgtctctacggaaatggccctcggtcagttggtaacaggccatatttatcaattaaactattgtttatatgtagctaaaaaggacaacggtcaaaaaggtaccaatgatatgaaacgacactcagtcggcagggaatttccgtggccattttcatccctagaaaaaaaccgacctacaagtgtcaaagccctcaaggaaatttaaaggtcatatcatgtaatatgcaacaatgcaacataactaaaatgggagggagggagggagggagggggttgttaaaaccaacttttttactacaaaaaggtttcaaatttggatctgcatatgaaatttagttgacacgaatttttttgacaggttttgtttgctcgttgtgtgatcattgttgcagcagtacatgccatccatctgataaattaccttgaatgtctcaatgttgaccacttaacattagcaatttgcttctttagattcttattgcactccgaaaatttcactatatgctcaattctattgttcctatatctaaaagcagtatcatctctaaatgattatccacttaaagcagtaccatctctaatgctattgttgctatctctaaaatgttgtgagtggaacactctgaattgcttgtgaggagcaggtaaatggttgttgtagttaacctaaactgcaaccgttttttagtgtttttatcaatgaatgattctcctattttagtgccactaaggctaaagctatttggtagagagcttggtaaaaagactacttcctccaatcaacagtatttgatattgggagtaataagttaatactcctgatgtcaaatattattgctaggagtgaattcaaaaagttagtactccctacaatcaatagtgttattgtcaaatattattctcgtgtaatgcattagagatcacaattctttgcttagtagtcatttaccatgattttttttcattttctggcaaagttgaaaaattaagcgaccatgctcttatttgcagcagtttcatggatgcagagctattggaatttgcaaactaaaacatggaccccaatgaacgtcacgactttaaaagtatgtcttgtgcacatgattttgccctactcactttctttttttgcagatataattggcatcggttttctcgtatcacatttgatagatgaattgtttgtagtgttggtgcataatttgttatatacatatagcttccatgcatattggtaggatagaaggcattaatatggactttgcctgttgtacatgagcacacttgaggcctaagttagattttcagtcagccgggaggtccttatgcactatgaggaataaactagcacacttggaggtattgaggtgttcttctacctgtccatttttggttaacatggatagctactcatgtggtgttcaaactgccttgtaggaattctcatagctagattaaaattcacagatattttctatgttgtcaacttctttttctaatggcaaatcgcaagtgttctacttcctggtgataagtataaccttgcttcttcttgttattaacaatcctgaaattgttcagtacaatggtcgttaatgtatatgatataactttgtgagagtgttttggcgattttttattatgtatgttttggtctgagattgagaatacatcttataaactgaaatcaaggcccaccttggcactaatggatcttcatcctctgtttatgtgtagtattgtatttctgatttcctaaagtggtcttggtgaaggttgatgatttgtatgttttcactatagtctcgttgtttctctgtttattgaattatactaagatatgactcaaatttaatagttgaaataagcttaggcttttaaacctttcttccattatgtgtactgtatgcattattaatgtattaaattctttataagataatatccatgtttagtgacacttaaaaaagaatcacgaagaaatttaaccctactggattttctcttatgtatcatgaccaaataacgaaccatatcctgtgccataaatatatcttctgagaattaatatactaaggataaaatctgtcatatagtattaataaccctcctcagaggacaattgcatgcctgcatctttttttatgtacttgtttctgggtttcttttattgccatgtcctgtttgggtttcttttattgccatgtcctatttgggtttcttttgtaattgtttgctcttgctatataggctccacggtaccgactgtgacatattatacccacagatgacgatgaaatttggtggagcttttggtgaagaaaaagcaattggaggacgagaagcagggaataattccatcgaatgtttgaagcatttgttttggttttctgttttcagatttcttgcaagcaaatttaaccatagcatcacaaatgcctagcccttcgatggaaatttagatgttttagtagtttaaagtgcagctataccttttcattgtatttgatttgcgcaagtaccagaactacctgaacaagtggaaaaccctttggtcatctagagaaccaacagtgatgtggctttgaatgaatgtggattatcttcagtactctttcatatgggttaattattattaggagttttgttgtaattatgcccaaagacaaatgattgtgctataactatcactactagcaaatgtggtagtttgtgtctgatgacttttgctacagataatattaatgaacattgattttcactaatcatagacaaacgccaattatgcatctgtttga</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0330400, RefSeq:Os04g0330400