Os04g0345500

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Revision as of 11:04, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0345500| Description = Conserved hypothetical protein| Version = NM_001186953.1 GI:297723036 GeneID:9266523| Length = 6890 bp| Definition ...")
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Gene Name

Os04g0345500

Description

Conserved hypothetical protein

Version

NM_001186953.1 GI:297723036 GeneID:9266523

Length

6890 bp

Definition

Oryza sativa Japonica Group Os04g0345500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:16446551..16453440

Sequence Coding Region

16453007..16453288

Expression

GEO Profiles:Os04g0345500

Genome Context

<gbrowseImage1> name=NC_008397:16446551..16453440 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:16446551..16453440 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ccaccacatcaagccaccaccgccactccttttgttgccacggtcgagctcctgtcgtcgccgttccggccaactccttcactctctccgccagccaccgccctccccaggtgcgtcgtgctcgggaacacgcgtggacgccgacgtcgcagccagtcagccaccggagcgccgtcgccccaaccgccctccctctcccttctatcggctgaaggaagaagaagacgagaagaaggagagagagagaaaaggaaaagagcaggtacatgtctgggtccatga</cdnaseq>

Protein Sequence

<aaseq>PPHQATTATPFVATVELLSSPFRPTPSLSPPATALPRCVVLGNT RGRRRRSQSATGAPSPQPPSLSLLSAEGRRRREEGEREKRKRAGTCLGP</aaseq>

Gene Sequence

<dnaseqindica>153..434#agcttgaagctctcttctctctctcctgccttgaccggccactgccaccatcagtcgatctcctcttccgcatctccacaagccaagcccttgcgccatcgtgtttgcctcgacgaggtgaacccatttttcccctttcccctctcttttagccaccacatcaagccaccaccgccactccttttgttgccacggtcgagctcctgtcgtcgccgttccggccaactccttcactctctccgccagccaccgccctccccaggtgcgtcgtgctcgggaacacgcgtggacgccgacgtcgcagccagtcagccaccggagcgccgtcgccccaaccgccctccctctcccttctatcggctgaaggaagaagaagacgagaagaaggagagagagagaaaaggaaaagagcaggtacatgtctgggtccatgaacagtacattttcgtattttctagatttaattcaaaacccaatctttagaagctcatatctcctaaaccgtagatcaaattccagtgaaacttaaaccctatcttttgacaccaaatttgctattttataattttatttgaatttattcaaatatcgtttgaatttatatttgccttttcaaatattttcttttgtcccaaattacccctttagccactaaaaagccgccggttggaactttatgccttccatggggacgttcgtggttttctatccccgacgtcgaactgttggttataaagcctggcaaaggccaaacccaaggtcgaagtgctgctcctggcaccccacgccttgatgcgtacaacggtcggagcttcattatcccctcgacctccattgcacgccgcacagttagctctcgggctctgtgtgatcctagccgctccaccgccactcacggttgtcggagtaacacttccgccccactaaacccacacaaacctcctatccctctagccgttatgctgcctgttgacaccggctagagaagataccaaacctagtcgttatgctctagcatcgactagcacacaaccaaaccctagccctcctaaccatttatcgttttcttgttattttatggcttttattgaatttagttcttcgtctttcttagtagagtctattatcttttggatggcaacctgtgatgtttcgaggatcagataatcaggttgcctatctcggatttgtttgcgttggagcaaggcaagttattattcctcccctttgagcattattatcctatattctatatccctattattccatgcattagccattcatgattttaaatgcataacttgaacacatagcaaaccagatatatatgctagattttgcttagccatgcctagttagattgcataaaatataatgaacttagattggaacagtacggtagaaatggttgatttccgggtggctagtactgttccaaccgacataagattgccaagtacatgtgaagaacgagcgagtacgaccgcaacttctagaatggggacagacttagcaaagtatgttatctagcaaaggtggtacccctgtacagtggttcttctttaagtcctcgcgcaggaggcaaatttacgccgagcagggcgattataatatttaccgaggcgtaggtaaatatattgattattgcgcgctgtgtgtgtattgtgaaaacctggttgggatgacgggggtctctcaaccagttctctctaaaaacctcgggaacgccagaactcctctcgctgctgataacgttacgttcagagcgtatgaggactatagttcatggaacaggtaccactaatgttaggaactgaaaagctttgccatgactaagctgatgaatattagcatgtcatggattgcgggtaaagtgtacatctactacagtatgagtatctctgaaactattcgaatagccatgctcacggatattgagcatcgggactcactatggcatcttggttagaaatataactccagattttattaaatattgttgcatttcaaaacattatagactttctccttctactttctcagctttctgcaattagatctagctctactcaaatactattatttcatacattcatacttgaatataataacttgctgagtacgttgtactcacccttgctttaacccccttctttcagaattaatttggagttcttgccgaagccgagagttcaatcatataagttagtttcatttcaacctagttctcaagtctagattagttagatggtttaagtctatagcaaaacattaggattgagtcattctatagcttctgctgtattagttagccacaagtttgtaaatacccatatattttgtaataacaactcctctagagccctgttcaaatgtatgcaatgaagagccagattgttgaacctgtatcaatctactgatccagggcttgatacagtctaaacatgtcggtttccgaatcattagttttgggacccgacatttcgaatgaaaaagtcatcaacaacaaagttgtataacttattaatatctataatttttactttggtcattttgctatatgactttgtgttcaataatttgaatttgaatttcaaattatgacaacttcaaacaacattttcaaatactgaatgatttcaattgaaaaagtcatcaacaacaaagttgtataactaatcaatatctataacttttattttggtcatttcttcatccgacaaagtgataaaaacattattcacaaaatttacatatctcttatatggtttataaaactataagagagatatgtaaattttgtgaacaatattaaaatcactttatcggatgaacaaatgaccaaaataaaaattgtagatctagatgaattatactactttgttgttgatgactttttcagttgaagtcgttcactaataaaaaattctatttgaagttctcaaagtttgaatttcaaatttcaaattatttaattagagtcagatggagaaatgaccaaaataaaaattttgcatctcaatgagttctacaactttggttttggtgacttttccattttaaatcatttattaacctcaatttttgtttgacgttatcaaattttgaaaattcaaaatttgaattgttcaaataaacttatttgtaaaaaggaccaatacagtagttgtagatctcgatgagttttacaattttgttgtttatgatttttgcatttgaaacacaaaaatcagcctaaaattaaatttaaagttctcataaatttaaggtgaaatgtccattttgttcatacaatttcataactactgttgacataccagggacagtttggtaaactcccgttggattgcttcctacccatataacctctcccccaaaccttagcccaaactaaatccatatgccgccgccgccaccatccattccctcaccgccaacatccctctcctcctccatccatcttcgcctttccccacgtcgctcccctagccagggaaggacggtggcacacggattcgccgcctcccgtcctcgggagcgacggcggcgcatgaatccaatggcctccgtcctcgggagcggcctggcgtgagtgggagcgccggcaacacgcagatccacccacctccgccctacggagcggcggcggcaggcttaggtaggagggagcgagcggctacggcggcggcggctgtggcgatgacggctacagtggctgcaacgacggctacagtgctgcagcgacgacgacgatgacaatgaccagcggcggctggcgacttgcaatcgcaaggcgggcaggtggcgcgggccgcgggggcacgcggcgcggggcaggggtgcagggtagcaggccagcgacgcgtcgggatctggatgagggtaacaactcccttgtcgagttgggaaatcggtagaagagatgctggctttcgcggatctggtggtttattggggtattctgttggtgcttgattgctgctgctgctggagcgatttgtagccgagataaagacggcgagtagaggattcagttttgcaggtcacaacctctctcgtagacagttttttgtgtgaatcagtcttgaaatggagtagtgattagcaaatattttttttccattctcctattgatccttcctttgtgaaaattagagcagtaattagttctgattgttttgtgaaaattagagcagtacatagttctgattgtttttgacagtcatacaattagtacttaaaatttataagcttctctcttcttgtattctagtgtcgatatcgatgattctcaagttcgaaattatttttaggttacataacagaatagctttcgtacttgaatttggagtggtaagcattaggagcatggttaggcatgttagtattatcaaggattggtctagcttcttaggtcaagcgtggtaaattgcatagtttctttaacaaaatatgggtgatccatgtttgacttgtgggtttaacaatgttcattgggaaagtagggaggcatctacctattgaatatagcttttctacatttaataactaaaataatccaaagagttagtttgggtcagagttgacttggtctagaaagaaaccgtgtttcaaaaatgtatggttaactaattataattaggaagatgtttatgcctgcccaaccgatcacagctgctgtttactgttttgatctctactctgtaccaaacttaccacatgcattcttcttgaaaaacaaacaccttcttttttgttaatgttaggtgtggtagcattgatttgaactcagttcaatccaagtatatagatcatgatatctccaaggaagaaattttttctagcttggatcctttagtgcagttggtagttgaagtaggaagggaagctactgctgcatctccacctcagtttgtagttcataaagtagaaattgtcactggtaaaagggaagcatcacctcctgagaagaaaggtcatggctagcatctctttgattccttctataatccaatataatgtctgtcacaaaaatatccccttaagaatgttaataagatgtgagatttttactaaattggccataaacttgctcaaagagtatatgttccttaaaatcctactcaactcacagatttgcctagcaaaaacagttactagttagaagcttctgcaactctaatgcaatgttgtgatcttttcttctgatcctttcttcatctgtcttgcagaatgtgactacaggaatgagggcctcgggactgcaagatccggtggcactggtgagcatcggcgggtggagccctaaccagggcgcgccgcagctggccatcatcctcaacccttccttcttgcgccgcagatggggcctttgccctgggtggccatattgggtggcggcaatgggattgagcgacctcactttaagtacagaactggagccaatgggattgagctctactgaacaaggcaagtaacttggattcttggttcttttgtccttacatgtgttatgccttcatatcaagtgcaggatctttttattgacacttgtaaatgttttatgttaggcaccctcattggcagtagacaagtggagccaagggggaagagcatgggcactgcaattgacagtgagcccactgtaattgatctcttcaatgagttgcattgcagcaaactaaaggttttagtgaacctgtaaagaaagctatagtaagtactgaactattacatcttctttccttcttttattaagtaccttatgcaatgaacctttatttatataataatgcaaaactgaaaccttgctttcattgctaggaggatatgcatgcccgggaaaccctcacttcatcatcagggcctccttcgacaaatgatagcatttggacagggtctgatcagtcctccctaagctagttgtatgctcaggtgcacagctttaacttgtctcttgtgcttttgcatccatatcaagcctattgtactgtttcattggtggctgaattttttgttcatggtgtgtatcaaaattgcctattactctgcctatttcaatttacttgctggattgtttatagttgttgttactatgaaactagatattgtttagttgtgactggaaaagagccatttgattgatcgatctagatactctatttttttctggattattagctgcaaaagagccatttgtttggatttagttgtgactagaaaagagccatttgtttggactttacggaaaagagccatatcaatatattgttattactcaatttacctgctggattattactctaaacactatttgttcatttgtttgcctccaagtccaaacaaaatggactttttattcaccatcaactgaaaacatgcaccttttgatggcaggaatgaggtggctgagcttggaatttgatggctcgtgttagtgtagttgaacttcgaggctgtgatcgcttttggtacttcagaacttggtggtgtatgtggctgctattgtatggtgtatgtggctgctagaacttggtgctagctgctggttgcttgcgggttggcacttttggtggctggagttttttttgcgttggttgctagaacacaggattttttggcactagttgttggctgctggtaggatgcaggccgaaagtgcagtggctgcttggtggaatttttttcctggctgctggcaagatgcacgccaaaacttagtagtggctgctaggtggaatttttttggtgcaggaacttgacactacctgtaggaacttcatagtcggctgggacttgtgtagttggatggtggatggaatattttgtattcatgtttcgtgcttttgtatggaacatgttggaaactgtattctggaacttgcttttgt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0345500, RefSeq:Os04g0345500