Os04g0348000

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Revision as of 11:05, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0348000| Description = Conserved hypothetical protein| Version = NM_001059054.1 GI:115457837 GeneID:4335540| Length = 4365 bp| Definition ...")
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Gene Name

Os04g0348000

Description

Conserved hypothetical protein

Version

NM_001059054.1 GI:115457837 GeneID:4335540

Length

4365 bp

Definition

Oryza sativa Japonica Group Os04g0348000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:16583007..16587371

Sequence Coding Region

16584113..16584931,16586098..16586188,16586276..16586331,16586832..16586880,16587001..16587083

Expression

GEO Profiles:Os04g0348000

Genome Context

<gbrowseImage1> name=NC_008397:16583007..16587371 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:16583007..16587371 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggaaacattgttaacactgtaaacaagttctcgggcaacaatgctgatggtgttcccttccggaggtgctcttacttgccaaatagtacttgtgacgagaatggtagttcagtgaccagaaaatctgcttctgctacaaatggcagtattaatggacatggtaccttgtataaggatgtgggtaatgaggaaatgcacttggctacagacagtacttctaaaccagggtgtcgtggtgatactaatcactgtactaacaaagaaagagaaactcggaatgtaattgtccacaccgactcaagacaaaatggggatgctactaattctgacaatgctgttttaatttgcaatcagacggctggtcatatgtcctatggtttggatggggaaagtaatagaagttctggaagcttagcggctgtggtttctgaagttcttgttagtaaagcaccacttgaaaagagatgtcgtactaaccttcaggaaactggagatttggaaaatactccaaatgcacatgtgagcaaaaggtcgagactgcacagggtttctcctgcaaacagtctgtttgatcgtgaggcttgtgatgacttaattgatagtgctcataatttagattgtagtcgcactcctaatgcttcagtgcatgatgaaacggtaccaaatgaagataaaacaccttgtacttctttagatgtgagaggttgtgaaggtacccctagagcttccttgaagagacgagtgaacaagaaaagaactaaacgggaagcatcatatccaacgacaccactaaatggaaataccggagctttagttgtgattgaacctcccctgactcgtactaaggctaagggtaaggctttatctcttgctacacctgaatctctcaagagaagcactagatcaggtcgactgatagttccacggttggatccaggaagccagaagattatatatgacatggacggttctatccttgccataaccaacttagagtcaccccggcttcaagggccttattcggagccgcctcctaagaggaggaaaacgcctcggtgttcgtccccaggacacagaagattgctgccattctaa</cdnaseq>

Protein Sequence

<aaseq>MGNIVNTVNKFSGNNADGVPFRRCSYLPNSTCDENGSSVTRKSA SATNGSINGHGTLYKDVGNEEMHLATDSTSKPGCRGDTNHCTNKERETRNVIVHTDSR QNGDATNSDNAVLICNQTAGHMSYGLDGESNRSSGSLAAVVSEVLVSKAPLEKRCRTN LQETGDLENTPNAHVSKRSRLHRVSPANSLFDREACDDLIDSAHNLDCSRTPNASVHD ETVPNEDKTPCTSLDVRGCEGTPRASLKRRVNKKRTKREASYPTTPLNGNTGALVVIE PPLTRTKAKGKALSLATPESLKRSTRSGRLIVPRLDPGSQKIIYDMDGSILAITNLES PRLQGPYSEPPPKRRKTPRCSSPGHRRLLPF</aaseq>

Gene Sequence

<dnaseqindica>1107..1925#3092..3182#3270..3325#3826..3874#3995..4077#gcatcttcaccctcgcgcccttctcctccctcgcctcgctcacccatcacctcgctcgcagccgagctgatccggccgcgggacgggggaggtggaggcccagcgtggctacgccgcagccccccttccctcgctccctcgctgggagctaaaccctagccgctgccgccgacgccgcgagcgcgtttgctgggggtacgtacgctcctcctatttccatggctagaatttctataaaatgttagatctccgttgtagactttctttttttttaagtactgtactagtagtaccaatctaggtctggacctctacctacgtatcaaagtcatttttcttttttttatcattattatttaagatattcaatgcaatgaaaaattaaagaacgattttggttactacttcctagtgttccccttctttgctgcaagttattttttttgctggtcagtaattaagtaaaacccccgacagtgttggaatgagagagggctttgattccctttgaggaaggacgggttattttgactgacacccccccccccctttctttgattcgatttggatggtgcggttttgcatcgcatgtatggccgaggtaaatcacaagcgtgtcatgtgtgctttgagctgcggttcgctatcagattattagggagacaactaattgaacccgatgatttctatactctccttttatacatctaattgcagccatatatctgattttttttcctttgaaagcacacacggcatcgaagattttgagctttggataaatatatcaacctcttctttttttgtttgataacatgtgcacgttttatgtttaaagaattcatgcaagcatgcttttactctagtagaatagtaacactgttgcgatgaatataagtaacctctttttgctgtatgacttgcatgcaggtctacttgatcgcgattccagccaagagtaactaggatagttttcatgggctgagaaaacaaatctctagatgtaatctcaacctggctttgctttcgtgattggtctggagagtgtgcacgactcaagtgtcctcagaatagtttgtggaaggcaactacttggagctgctttcatgggaaacattgttaacactgtaaacaagttctcgggcaacaatgctgatggtgttcccttccggaggtgctcttacttgccaaatagtacttgtgacgagaatggtagttcagtgaccagaaaatctgcttctgctacaaatggcagtattaatggacatggtaccttgtataaggatgtgggtaatgaggaaatgcacttggctacagacagtacttctaaaccagggtgtcgtggtgatactaatcactgtactaacaaagaaagagaaactcggaatgtaattgtccacaccgactcaagacaaaatggggatgctactaattctgacaatgctgttttaatttgcaatcagacggctggtcatatgtcctatggtttggatggggaaagtaatagaagttctggaagcttagcggctgtggtttctgaagttcttgttagtaaagcaccacttgaaaagagatgtcgtactaaccttcaggaaactggagatttggaaaatactccaaatgcacatgtgagcaaaaggtcgagactgcacagggtttctcctgcaaacagtctgtttgatcgtgaggcttgtgatgacttaattgatagtgctcataatttagattgtagtcgcactcctaatgcttcagtgcatgatgaaacggtaccaaatgaagataaaacaccttgtacttctttagatgtgagaggttgtgaaggtacccctagagcttccttgaagagacgagtgaacaagaaaagaactaaacgggaagcatcatatccaacgacaccactaaatggaaataccggagctttagttgtaagtgtaattttattttcagggtaccttacttattatgttaaggacttaaaagtgttaacatgtctactgttgttgtttacaagtgatttttttcttctaccattgctgaaacctttaatggctttttaccactaaaacaaggaccttatctcattttcttttcttctttccatataaataccaagaaaatcacggttttattaattgcttctctagaaatttacgtaaaagcaggttgcacatgtgtttaaagaggcacactcgtaggtgtgtgcatgttgtgtgtgtgtgtgtatcttccttgtaatcacataaggtgggtatatagttctcaagggtggcaaaagaaattacacaaactaagatattttaaagcttgaaactgcatagtgtgaccacatgttacatgtttaaaccagtactctatgtatattgtggaaatagcctccaattcatataggtattgcccgctcatattgaatttgtacaaaaagttcttttgaaattcatgtgttccaaactgccagctatggtaacttatatggtttggcattcgcagagtatgtttgaagttatttaaggcaaactttcttacattcgaaactaacgtttcacaaggttcagtaagaagttgtattggctatgcaactaatagataaagccctaaccaaatgttttgatcatattatttgcattattaaacacatcctttggttttccgaaaggcaaatggtattactctggttcctaattataatgccaaaggcgttatcaagggagtaggtaagtacaagttgacacaacatgtttgttcttttaaggaaatagaggttgggggggggggggagtaggtggaatgctcactcaagccatttaaggaaggggttcactctgtggttctgcagaaactttgttgcgatcatgctgttgtcattgtaataaatagtcacctgaataaaaatcagacattcaagcaatcagcaagttgtgcaaattctggttttatgttttttttgttttgacactttaggcctacgtattgcctgcaatgaagttgcgtatacattatgaatccatttgtctttcaatgtatagtctcatttgcatgtgaaatatgtatgcttctattgagaacttatttaatagtttgttgaaatttgaaggtgattgaacctcccctgactcgtactaaggctaagggtaaggctttatctcttgctacacctgaatctctcaagagaagcactagatcaggtgaagtgtttggtctttgaattttgaataccgcttaaccatttattcatttattcatttaccaagaaatgtgtttatttttttcaggtcgactgatagttccacggttggatccaggaagccagaagattatatatgacatggttagtaataatataattgttcatttttcttgaaaagaaaacataagcattcatttctgctgttaccataatcagaagtttatgtagactcgtgctatgtaatgttaaagttatcaactagcacaagtatcataatgtatgtgatcagctctcaaaattgaaaaattgtgctagcacaaaagctgaaggttcaccagggatgctgcataacctgatggtttgaattgttttcacttggaacattatttctgtgtacttcattggagctgttttcacttgaattaaatttacatgcccatcaaatagttcagctgaaaatataggactatgatattaaaactgcggctcattatgtcttcaagaactgtcattagcagtgctcactattttctttcatttcagtgttgaaacaggtctagtgtataactaaaattatgggtgtgataatgatatgcctagcaagtgtatatatcttactgaatacacagctttattcacaggacggttctatccttgccataaccaacttagagtcaccccggcttcaaggttcgttcagaacttcagacatttcacatccaattgtcatgcccatacttttccagtttcttgtgcctgatgatttaagcaaaacctattgtcaagctatgccttctcgtcttgcaacagggccttattcggagccgcctcctaagaggaggaaaacgcctcggtgttcgtccccaggacacagaagattgctgccattctaatggtgaacatatggtgaaaaagaaattctgacactgtccactggcatgatgatatggtgtccaacccgttgtgcatctgtgtgaaagctttttgtccttttaaccagctaagtagagctagcttctgtaaaatgtatcgtgggtacaccatgatgtatgtttctttgctaggcttcgaaatggatgcttgctaaaatatgggcgtaggtattttgcatacaatagatggtgttgacaccctgtgaactttgtaaggtcacttccagttgagaaactatccttcgtgta</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0348000, RefSeq:Os04g0348000