Os04g0351333

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Revision as of 11:05, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0351333| Description = Protein prenyltransferase domain containing protein| Version = NM_001186958.1 GI:297723046 GeneID:9271155| Length = ...")
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Gene Name

Os04g0351333

Description

Protein prenyltransferase domain containing protein

Version

NM_001186958.1 GI:297723046 GeneID:9271155

Length

5318 bp

Definition

Oryza sativa Japonica Group Os04g0351333, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:16776153..16781470

Sequence Coding Region

16776153..16778167,16781263..16781470

Expression

GEO Profiles:Os04g0351333

Genome Context

<gbrowseImage1> name=NC_008397:16776153..16781470 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:16776153..16781470 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaccgatgggcctgcccccgccactctcctcccaccatccacacctacaacatcctcatcgactgctaccgccgcgtgcaccgccccgacctagggctcgccatcgtcggccgcttgctcaagaacggcctggggccggatgatttctcgtactcgctcatctacggtttcgttaaggatggggaggtggacaaagctcactgcttgttccttgagatgatggagcagggcgtattgccgaagatactgatttgtaactcaattatcaaagagctttgcaagatgaaggaaatggacaaggccgagagcattgtgcagaagatggtcgattcgggtattgcaccggacttgtttacttatagcttgattattgacgggctgtgcaagtcaaaggcaatggacaaggctgagagggttttggagcagatggttgaggctggtactcgacctaacagtataacatacaatagcttaatccatggatattccatttcggggatgtggaacgaatcggttagagtgttcaaacaaatgtcaagttgtggtgtcatcccgactgttgataattgcaactcattcattcacgctctcttcaaacacggtagaaccaacgaagcaaaatgtatttttgactcaatggttctgaagggccccaaacctgatattatctcctactctacgatgcttcatgggtatgctactgctactgacagttgtttggctgatgtgcataatatcttcaatttgatgctaactaaaggtattgcacccaacaaacatgttttcaacatactgattaatgcatatgctcgttgtgggatgatggataaggctatgcttatatttgaagacatgcagaacaaaggaatgatccctgacactgtcacatttgcaaccgtgatatcttctctttgcagaattggcaggttggatgatgctctgcacaaattcaaccacatggttgatattggtgtaccaccgagtgaggctgtttacggctgtctgatccagggttgttgtaatcatggtgagttggtaaaagccaaggaattgatttctgaaatgatgaacaaggatattcctcctcctggtgtcaagtatttcagttcaataataaacaacctgtgcaaagagggaagggtagcagaagggaaagatatcatggacatgatggtacaaacggggcaaaggcctaatgttgttacttttaattcattgatggagggatattgcttagttggtaatatggaggaggcatttgcattacttgatgctatggcatcaattggcattgaaccgaattgttacatatatggtacgcttgttgatggctattgtaaaaatggaaggattgatgatgcattgactgtattcagagacatgttgcacaagggagtcaagcctacaagtgttttatatagcatcattctccatgggttatttcaggccaggaggacaactgctgcaaagaaaatgttccatgagatgattgaaagtggaacaaccgtgagcattcacacatacggtgttgtgcttgggggactttgtagaaacaattgcaccgatgaagcaaatatgctgttggagaaattatttgctatgaatgtaaaatttgatattattactttcaatattgtgattagtgcaatgttcaaagttggcagaaggcaagaggctaaggaattgtttgatgcaatctctacttatgggttggtgccaaatatacaaacctacagcatgatgataacaaatcttataaaagaagagtcatacgaagaggctgacaatctctttatatcagtggagaagagtggccatgcttctgactctcgtcttcttaatcatatcgtcaggatgttactcaataaagctgaggttgccaaggctagtaattatctgtctataattggcgagaataacctcactcttgaagcttcaactatttctttactggcttctctcttctcaagggaaggtaaatatcgggagcatataaaattgctccctgcaaacatgacgatggcggtagtggcggcgacggcgaagcttgtgctgcttctggcggtgttgttgcagttctccggcgtgctcacggcggcgaggacgctgccgggggaggagtggctgctgccggagggcggcggcgtcgtacgggcggtggtggagatgctcgtcggctccaagtccggcggaggcggcggtggcacccactgctgctag</cdnaseq>

Protein Sequence

<aaseq>MDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNG LGPDDFSYSLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKA ESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLI HGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKG PKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMM DKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYG CLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMM VQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNG RIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHT YGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDA ISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNK AEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREHIKLLPANMTMAVVAATA KLVLLLAVLLQFSGVLTAARTLPGEEWLLPEGGGVVRAVVEMLVGSKSGGGGGGTHCC </aaseq>

Gene Sequence

<dnaseqindica>1..2015#5111..5318#atggaccgatgggcctgcccccgccactctcctcccaccatccacacctacaacatcctcatcgactgctaccgccgcgtgcaccgccccgacctagggctcgccatcgtcggccgcttgctcaagaacggcctggggccggatgatttctcgtactcgctcatctacggtttcgttaaggatggggaggtggacaaagctcactgcttgttccttgagatgatggagcagggcgtattgccgaagatactgatttgtaactcaattatcaaagagctttgcaagatgaaggaaatggacaaggccgagagcattgtgcagaagatggtcgattcgggtattgcaccggacttgtttacttatagcttgattattgacgggctgtgcaagtcaaaggcaatggacaaggctgagagggttttggagcagatggttgaggctggtactcgacctaacagtataacatacaatagcttaatccatggatattccatttcggggatgtggaacgaatcggttagagtgttcaaacaaatgtcaagttgtggtgtcatcccgactgttgataattgcaactcattcattcacgctctcttcaaacacggtagaaccaacgaagcaaaatgtatttttgactcaatggttctgaagggccccaaacctgatattatctcctactctacgatgcttcatgggtatgctactgctactgacagttgtttggctgatgtgcataatatcttcaatttgatgctaactaaaggtattgcacccaacaaacatgttttcaacatactgattaatgcatatgctcgttgtgggatgatggataaggctatgcttatatttgaagacatgcagaacaaaggaatgatccctgacactgtcacatttgcaaccgtgatatcttctctttgcagaattggcaggttggatgatgctctgcacaaattcaaccacatggttgatattggtgtaccaccgagtgaggctgtttacggctgtctgatccagggttgttgtaatcatggtgagttggtaaaagccaaggaattgatttctgaaatgatgaacaaggatattcctcctcctggtgtcaagtatttcagttcaataataaacaacctgtgcaaagagggaagggtagcagaagggaaagatatcatggacatgatggtacaaacggggcaaaggcctaatgttgttacttttaattcattgatggagggatattgcttagttggtaatatggaggaggcatttgcattacttgatgctatggcatcaattggcattgaaccgaattgttacatatatggtacgcttgttgatggctattgtaaaaatggaaggattgatgatgcattgactgtattcagagacatgttgcacaagggagtcaagcctacaagtgttttatatagcatcattctccatgggttatttcaggccaggaggacaactgctgcaaagaaaatgttccatgagatgattgaaagtggaacaaccgtgagcattcacacatacggtgttgtgcttgggggactttgtagaaacaattgcaccgatgaagcaaatatgctgttggagaaattatttgctatgaatgtaaaatttgatattattactttcaatattgtgattagtgcaatgttcaaagttggcagaaggcaagaggctaaggaattgtttgatgcaatctctacttatgggttggtgccaaatatacaaacctacagcatgatgataacaaatcttataaaagaagagtcatacgaagaggctgacaatctctttatatcagtggagaagagtggccatgcttctgactctcgtcttcttaatcatatcgtcaggatgttactcaataaagctgaggttgccaaggctagtaattatctgtctataattggcgagaataacctcactcttgaagcttcaactatttctttactggcttctctcttctcaagggaaggtaaatatcgggagcatataaaattgctccctgcaaagtatcagttttttgagggagcctggcaagattaatacattgttgtatctgaaattgtttcaacatgttgcactctagagtttcttctgctcccacgggaaggaaaataacctgtcccccaaaattctggcattgattattttattgttgttgtcagtaatgtgttgtttgtgttgaaatcgtgagcttgtcaattgctctgcataccttttatctgttgttattgaatgagaagctagacagcggagttcaaaataaactgttgcatttttaatacgacaacttctgatgaaaaaggtagcacaggtaggtgtatgcattgtgaagatatttgtgaagataggaactaacttacctttatattcttatgttttagttgatgttattcttggcgatcttctgcttataagcgactacttgattacttttgcttgaaggatattatcttcatttcagcacaaaaggtcctttgaagactgaatattgtttattcttcgacaaatttccaacgacactttatcagtaggaggttgttgcataatggtcagatcagctatagtttcgtttggacaatactcgatcctcaaatgttcaactggctgatctggtgatcgcctttatttcagacagttcagagcagagaaagccatttcctatgtttcgtggctatctttctggaccctgattcaaaacaattacttttttcataagcatatctttggcagatacaatcctagctagctagtgaacttcgtgatatggatgggcttattacttttgatacattgaagtcgtgtggaagcaggatttttgaacacgctgataaaatttttcactatcagcagacaagatgaatgcccatcaagttatacttgcataaaggtgagatgagtaatgctatgttttcattcttctgatgaaaacttgctatgttaaaatttcaactgcttggtttctatatttatttaacgaagtattaaacatacaaaatatattggcaatgtagggactgccatttaaaggaggggtaatcactcggtaaaaatttaaaaacattctgctaacaagtttttatcattgtttgcatcttggttgcctcctgctccgtggtaaatgacctagtcttctcctgtaacagaaatggaaaattgagttgctgcatgcgatgaggttcagcgttgtgtttacgattcactcagggaaaggctggaggtagcgaagagggagattcgccattgagttgaagatggaagtgctttcccatgattgcggtaggtagaagaaattattttgcaggtagtgttggtgcttttgatgtcttatttttgcatatcgttcacatttttctccttcttaaattctcctgaaacttgttagagctgtgacattcatcatctacgttttcagttcaggcaatgttgcttactgcttagttaaggtataagaaattatcgaagccaacttatatggagtgtggacagtttcatcgttattttagaaaaaccaactaatagtttcatcatggtttggatattgtgcatgtaggtttagatgcaagaaacataagtactgcagacctgaaaatcgaagcgctgacaacatagctgcaataataatttctctaactggcttgggtttgaggtctgaattaatcagctggttttggtcacaaaatgtgacatgaatatttctgaacgttggtcaacttacaattacatctgtccaaggctcacattctgttctctctttcagaattgcacttgtgaccatataaatctgcatggatagggatcactacctgtttatgattctctttccctttttgtactgaaattttccagggatgattaagggcctgtttggcacagctccagctccagctccggccctcctggagctggagctcagccaaacagtttcagctccaccaaaactgggagtggagctgggtggagctctcacacaaaatgaactagagttgtggagctgggtttatgcagctccacaactccactccagacccaactcctgaaactaaatttaggagttggagctgtaccaaacaggccctaactgatgttgctgtaactgaagcaagacctcaatagttcttccatggactatttccaggccactcctccaagcagccaccatgcagctgacagcaaaatctggcctattcttcgattcttcaatgaatcatccatcttgttcacatatattcttgttgaacaaacctgaacaggtatcactcttttcctacctttgacctgaacacaaaggcacgtaggttcgaggactctttttgctagtaaaattaacaaaggcctggtttagtttccaactttttcttcaaacttccaatttttccatcacatcaaaacttttctacacacataaacttccaactttttcatcacatcgttccaattttaatcaaacttccaaatttaacgtgaactaaacacacccaaagtggagtactactcagacagctgccactctgctagtactctagctactaatttttagttatttttaacttgacgtttttaaaaacctttggcaataaatcaaaacaatattttgaaatcatttttggttataaatttaatgatatatatttagaaaataaacccatatgataattctaagcataactttagtgaaattggctgcacaaatttcagggtgtaaactaaaaacagacagagatatagttctttcatcctaaactgttgctattttattggggattgaaaattcatcggtccaaattccaaattagaacccgtgtccatgttggggaccaaaagcatgctgcatgcagtcaatcacaaacatgcgaattcttggtccgtacaaaggtagtagaacatagtacgtaattaactgcggtcttagcttaaacttaaacacgcacgagcagactttaaaatcaacacactgctgagacgaattcaaagttcaaacagtagccaacctgctatctacctatatatatgcggctacctcctcgccatgaagctgacacctctcttgctgctctctttagctaaagtgttctccattttctgtctcccgtttactcgacagcatgacgatggcggtagtggcggcgacggcgaagcttgtgctgcttctggcggtgttgttgcagttctccggcgtgctcacggcggcgaggacgctgccgggggaggagtggctgctgccggagggcggcggcgtcgtacgggcggtggtggagatgctcgtcggctccaagtccggcggaggcggcggtggcacccactgctgctag</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0351333, RefSeq:Os04g0351333