Os04g0352400

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Revision as of 11:05, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0352400| Description = Peptidylprolyl isomerase, FKBP-type domain containing protein| Version = NM_001059070.2 GI:297602522 GeneID:4335556| ...")
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Gene Name

Os04g0352400

Description

Peptidylprolyl isomerase, FKBP-type domain containing protein

Version

NM_001059070.2 GI:297602522 GeneID:4335556

Length

4124 bp

Definition

Oryza sativa Japonica Group Os04g0352400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:16834826..16838949

Sequence Coding Region

16835200..16835253,16835351..16835471,16835554..16835681,16836263..16836409,16836488..16836613
,16836701..16836966,16837065..16837259,16837383..16837463,16837562..16837636
,16838076..16838336,16838439..16838525,16838650..16838866

Expression

GEO Profiles:Os04g0352400

Genome Context

<gbrowseImage1> name=NC_008397:16834826..16838949 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:16834826..16838949 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggacgacgcgtacgacgacctcccaatggccggcgcggaggaggaggtggacgacgtgatgaaggacgagctcgacgaggagggggactcctcctcccccgtggcaatgaaggtcggggaggagaaggagatcgggaagcaggggctcaggaagaggctcctcaaggaaggggaaggatgggatcgccccgaatccggcgacgaggtccaagttcactacaccggcactctcctcgacggaaccaagttcgattccagccgcgatcgtggaacccccttcaaattcagcctcggccaaggggaggtgatcaaggggtgggatgagggtatcaagacgatgaagaagggggagcaggcggtgttcaccgttccgccggagctcgcctacggcgaggccggctcgccgccggcgatcccgcccaacgccacgctgcggttcgacgtcgagctgctctcctgggccagcgtcaaggacatctgcaaggacggcggaatcttcaagaaggtgctcgccgagggacacaagtgggagaatcccaaggacctcgacgaggtgctcgtcaagtacgaagcgaggctcgaagacggaactgtggtatcgaaatctgacggtgttgagtttgctgtcaaagatggctatttctgcccggcgctttcaaaggctgtcaagacgatgaagaagggcgagaaggtcctcctcactgtcaagccacaatatggctttggtgagcaaggcaaaccagcttctggagctgaagctgctgtgccgccaaatgctaccctgtacgtcgatcttgagttgctctcctggaagacggtcactctgatcggcgacgataagcgcatcctgaagaaagtcctcaaggaaggggagggctatgagcgccctaacgatggagcagtagttagagtgagatttatcggcaagttggaggacggcactgtgttttccaagaaagggcatgatggtgatgagccatttgagttcaggacagatgaggagcaagtcatcgaagggctggacagaactgtggtcaccatgaagaaaggagaggttgcattggtgagattaccacctcaacatgctttcggatccactgagactaagcaggatcttgctgttgttcctgcaaactccacagtctggtatgaagttgagcttgtctcattcgagaaggagaaagaatcatgggatttgaaggacaatgctgagaagattgaagcagctgccaagaagaaagatgaagggaatgtgtggttcaagatgggcaagtatgctaaggcctccaagagatacgaaaaggctgcgaagtacatcgagtatgacagctccttcactgatgatgagaagaagcaatcgaaagcactcaaggttagttgcaagctcaacaatgctgcttgcaaactgaagctgaaggaatacagggaagcagagaagctctgcaccaaggttttggaactggagagcacaaatgtaaaggccttgtacagaaggacgcaggcatacattgagcttgctgatctggaactagcagagttggatgtcaagaaagcactggagattgatcctgacaacagggatgtgaagatggtgtataagacattgaaggagaagatcaaggagtacaacaagagagacgccaagttctacggcaacatgttcgcgaaatggaggaagctggaacacatggagaacaagaaggtgcctgggaagcaggaggcacagcctatggccattgacagtgccgcttga</cdnaseq>

Protein Sequence

<aaseq>MADDAYDDLPMAGAEEEVDDVMKDELDEEGDSSSPVAMKVGEEK EIGKQGLRKRLLKEGEGWDRPESGDEVQVHYTGTLLDGTKFDSSRDRGTPFKFSLGQG EVIKGWDEGIKTMKKGEQAVFTVPPELAYGEAGSPPAIPPNATLRFDVELLSWASVKD ICKDGGIFKKVLAEGHKWENPKDLDEVLVKYEARLEDGTVVSKSDGVEFAVKDGYFCP ALSKAVKTMKKGEKVLLTVKPQYGFGEQGKPASGAEAAVPPNATLYVDLELLSWKTVT LIGDDKRILKKVLKEGEGYERPNDGAVVRVRFIGKLEDGTVFSKKGHDGDEPFEFRTD EEQVIEGLDRTVVTMKKGEVALVRLPPQHAFGSTETKQDLAVVPANSTVWYEVELVSF EKEKESWDLKDNAEKIEAAAKKKDEGNVWFKMGKYAKASKRYEKAAKYIEYDSSFTDD EKKQSKALKVSCKLNNAACKLKLKEYREAEKLCTKVLELESTNVKALYRRTQAYIELA DLELAELDVKKALEIDPDNRDVKMVYKTLKEKIKEYNKRDAKFYGNMFAKWRKLEHME NKKVPGKQEAQPMAIDSAA</aaseq>

Gene Sequence

<dnaseqindica>3697..3750#3479..3599#3269..3396#2541..2687#2337..2462#1984..2249#1691..1885#1487..1567#1314..1388#614..874#425..511#84..300#cctcgcctcccttccctcgctcttcccaagtcacagctacgcacgcacgcacgcgcaccacgaaccagcacgcgcaccacccaatggcggacgacgcgtacgacgacctcccaatggccggcgcggaggaggaggtggacgacgtgatgaaggacgagctcgacgaggagggggactcctcctcccccgtggcaatgaaggtcggggaggagaaggagatcgggaagcaggggctcaggaagaggctcctcaaggaaggggaaggatgggatcgccccgaatccggcgacgaggtccaaggttagtaggcgcccaccatgcctgtgattcttcatcctcccgttgattcgaatcacacgaatccattcaagcacgcagagcgttgaataattcgaatttttttgtttgtttttgtttatttcagttcactacaccggcactctcctcgacggaaccaagttcgattccagccgcgatcgtggaacccccttcaaattcagcctcggccaaggtgcggatcggattcccagtttccccccacatttcgtcgcaatattcaccatagttgaattgaattgccgaatcgtactgaatttttttgaaaaatctgcaggggaggtgatcaaggggtgggatgagggtatcaagacgatgaagaagggggagcaggcggtgttcaccgttccgccggagctcgcctacggcgaggccggctcgccgccggcgatcccgcccaacgccacgctgcggttcgacgtcgagctgctctcctgggccagcgtcaaggacatctgcaaggacggcggaatcttcaagaaggtgctcgccgagggacacaagtgggagaatcccaaggacctcgacgaggtgctcggtacgtttcaaaattttgttcgaacgaaatctcaagtcgaaacgagaatcaggagaaaattttcaaatgagaagaccattttagcattattgtgatcattttaaattcagttcaacacagcaaatagtaacatatggggtatgatgaatttctatgaaattcaggaagatggcaagtttctgaaaatttcaaattggaagactattttagatttttgttcttctcattttaaagtccgtgaaacaaagtgagacagtaagataaggggcagaaggaatttctacaaaattaaagaaaaatataggcgaatttcgaaattgcatacactgattggtggtttggtaaattggtatccatcagtgaaaattctcttatactgaaatggttgctaaactttttttttgaaagaatggttgcaaaacttgttctctatttgcagtcaagtacgaagcgaggctcgaagacggaactgtggtatcgaaatctgacggtgttgagtttgctgtcaaagatggtttgtatcccctgcatcattgagcctctgcaattcagaatttaaccctgaaaaatgccatgtcactctccgatgaacataattctgtttatcttcaggctatttctgcccggcgctttcaaaggctgtcaagacgatgaagaagggcgagaaggtcctcctcactgtcaagccacaatgtgagtcaatcggagtcctcctttcaagagattttgcaactaatctatgtctttggtggtaatgttctgatgatcttggaaatggcattgttgagtgctgacatgcacttttctgatctgtagatggctttggtgagcaaggcaaaccagcttctggagctgaagctgctgtgccgccaaatgctaccctgtacgtcgatcttgagttgctctcctggaagacggtcactctgatcggcgacgataagcgcatcctgaagaaagtcctcaaggaaggggagggctatgagcgccctaacgatggagcagtagttagaggtgtgtgctgctgctgctaattcttgcatttgttatggttctattgtacctgcacacttgcaatgtgttcaagaacatggtttgttgtgcttttgcagtgagatttatcggcaagttggaggacggcactgtgttttccaagaaagggcatgatggtgatgagccatttgagttcaggacagatgaggagcaagtcatcgaagggctggacagaactgtggtcaccatgaagaaaggagaggttgcattggtgagattaccacctcaacatgctttcggatccactgagactaagcaggatcttgctgttgttcctgcaaactccacagtctggtatgaagttgagcttgtctcattcgagaaggtaatccatcaactcctcgttgtttgtttacctgtctcttgattttggttgagctgaaagtgattaaaaattctggatttcgctcaggagaaagaatcatgggatttgaaggacaatgctgagaagattgaagcagctgccaagaagaaagatgaagggaatgtgtggttcaagatgggcaagtatgctaaggcctccaagagatacgaaaaggtaaaaaattaaaatctgaacctaaaataaattctaaatttatttgcttaatacttcatattttttgctcttgattaggctgcgaagtacatcgagtatgacagctccttcactgatgatgagaagaagcaatcgaaagcactcaaggttagttgcaagctcaacaatgctgcttgcaaactgaagctgaaggaatacagggaagcagagaagctctgcaccaaggtactgtacgagttcttggtgtttgtcttgttaatgtagaggttcttaactgacaatgtaaaaacaagagtaaaatacaccagcggtccttaaacttgtcagcaggtttcacttaggtccacgaacttgtaaagcgcacatcaaggtccctaaacttggtttattgtatcattccggtccaaagccgtgtttgaccgtggtcttgtctacgtggcacgtcacgtggatgatgacatggatttttttttatattttttctcccttattctttctcttttctcttttatgaaaagacgatgacatggacgatgacgtgcatgaggcattttcatcttttcgacaaggaagaaagagaaaaaaagaaagaagaagggagaaaaaataaaaaaaatctatgtcatcgttcacttggcgtgcacgtaggcaagaccacggttaaacgcggctttggaccaggatgatacaataaaccaagtttagggcccttaatgtgcactttgcaagttcgtggacctaagtgaaacctgctgacaagtttaaggaccgctggtgtattttactcaaaaaacaatgctgtgcaggttttggaactggagagcacaaatgtaaaggccttgtacagaaggacgcaggcatacattgagcttgctgatctggaactagcagagttggatgtcaagaaagcactggagattgatcctgacaacaggtgaagctcaagttcatcagaacatgttaaataccaccatatctccataatttgtgactcactgttgctgttctcttctcagggatgtgaagatggtgtataagacattgaaggagaagatcaaggagtacaacaagagagacgccaagttctacggcaacatgttcgcgaaatggaggaagctggaacacatggagaacaaggtaggttaatctgccactattgagcgtcttccggccacacttacctcagctcagatgcgcttgtttctcaccattgttgcttgttgaactgctgcagaaggtgcctgggaagcaggaggcacagcctatggccattgacagtgccgcttgaggattagctctgctttcttttttctgaacctggttactgctagtactactgtctctactggttgtatgagtatgaaatatgaatggaaaatggtagttaatttgccctttgcttgatagttgcagtctttgcaactctgcacccatatgtgctcagctttgtacgagaagtggttgccgtcatttgaagatgtgatgctgtgattgtattgtggtgttagaagagcaaaaatgccataacgacactttggactgcgctactaatgttgttctttcttgtttctattgcaatatggtataacatctgtgccttgtacgcaggacgtatgtcccgacattgtttgtttgtttatgagaagattgtgagactgaact</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0352400, RefSeq:Os04g0352400