Os04g0375900

From RiceWiki
Revision as of 11:06, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0375900| Description = Kinesin, motor region domain containing protein| Version = NM_001059112.1 GI:115457953 GeneID:4335606| Length = 4936...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0375900

Description

Kinesin, motor region domain containing protein

Version

NM_001059112.1 GI:115457953 GeneID:4335606

Length

4936 bp

Definition

Oryza sativa Japonica Group Os04g0375900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:18382244..18387179

Sequence Coding Region

18382499..18382534,18382746..18382787,18382888..18382956,18383029..18383050,18383132..18383178
,18383291..18383547,18383635..18383707,18383787..18383891,18383967..18384017
,18384104..18384178,18384301..18384334,18384407..18384505,18384594..18384850
,18385356..18385558,18385650..18385842,18385937..18386140,18386574..18386787
,18386885..18387084

Expression

GEO Profiles:Os04g0375900

Genome Context

<gbrowseImage1> name=NC_008397:18382244..18387179 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:18382244..18387179 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcagcagcagaagcaggaacccggcggcggcggcggcggcgtcagagtcgtcgcgaggatctgcccctgcgcaccaccgccaccaccacccgacgccgccctcaacttccaggtcgccgccctcaatgaccccgccctaatctccttcatcccccgtcgcccaaccgcatccgccgccaccgccgcggcctctggccgaggagatggccccaaggataagcagcagcagcagcagcagaagtacagggtcgatggctgctacctcagagacgatcccaaccaccgcgtcttccacaacgaggtcaagccgctcattgatggcagaggtggaggaggaggaggacgcggcggcgccaaagcctgcgtcgtcgcctgtggtgatgcggctgccaaacgtcacctcttcatggggtctcctgatcaacctggcttgttcaccatggcaatggcgcaactcctcgactcctccaaagccattggtgccgctgtcactgtctcatcctatcaggtgctccaagatactcacatcctcgacctcttggagcccaagaaccatgaggttctcatactagaggatgccgacggacagactcacctcaagggcctctccagggttggtgtcaactcaatcgaggagttttcgcagctttgttgttgcgctaccaaccagcagaggcaccatcccgctaaagattccacccagttacaggattggggacaccaagggctgattatctacgtctctagctttgatcagcaaggcaaagaatgtgctctagctaagataaacttcctcaacctggcaggctatgtggatcccaagcagaagaagaatgaaggtcttgctctactaaccggtaacaagtctatgcatgccttgatgaatgttgtccaagcactgaacagcaaccagagatttgtaccatatagacaaagcaaagtaactcgtattctgcaagattctttatgcaagagcaagacgagcggtagcgtcctgatagcctgtttggctgaagattgctgccaagattcagtttctactcttgccttggcttctcgctcgagccaagtggtcaatgaacaatactacagcttatccttgagtgctaaaaaatcatcaaagtcaaatatgaacttacctaccgatgccaaaaccttgtcaaggacgtttattcacaaaacaatgtcgatgcaagagaagaatgcccgacctggattcaataatagtggtgtaaaaggcggacaaactcctactgctaatagaaggactcagccaatcattagttcaacgaaaaaatctggaagctcaatctgtacttcaattaagatgaaggaaaattatgctaaacctaaaataagtggaaggaaattattttgtccaagcaacaattcattgaaggaggagaatgctacggatgttgcttctacagtggtaacagaaactaagtcagcaacagtgagaatacaagctgatgaagtacaaccattagtaggcatggaaattcgagctgcattactaaatgagggatgttctgaaataggaaacaccggagatgttaaatcatctgaaatgcaagaagtggtacattgcagcacacaagaactgctagcaagtactatacaagaagaggactatgccttgtcaaatatggaaccggagaattcatgtactgacatgggattgacctgctcttctatcactgataaccttgttgagaagactcctgccagcagtaccctatcctccccaaagttgagtgaccgactgagagagatttcaaactcattgaagcttcttagcactcggccagtgagcgtgagggcagaaaagtgggacatagaatgtgcccggagaatcaacacgattgcaccagagccaaaaactcctgaagtgcatttgaaatttgagcaagcagaagatcccaaggataaacttacggcccgcagcactgggattaagaaatctctagctcaagagtgcttgacttttctcaacagtgctaataaggagcaattaaaaagcttaaagggaatcggagataaaagggcaaactacatacttgagcttcgtgaggagtcaccagagctatttaaagagataagtgatctgagagacatcatcggaatgaattcaaaagagatcaaaaagatgatgtccgggattatcgacccctaa</cdnaseq>

Protein Sequence

<aaseq>MEQQQKQEPGGGGGGVRVVARICPCAPPPPPPDAALNFQVAALN DPALISFIPRRPTASAATAAASGRGDGPKDKQQQQQQKYRVDGCYLRDDPNHRVFHNE VKPLIDGRGGGGGGRGGAKACVVACGDAAAKRHLFMGSPDQPGLFTMAMAQLLDSSKA IGAAVTVSSYQVLQDTHILDLLEPKNHEVLILEDADGQTHLKGLSRVGVNSIEEFSQL CCCATNQQRHHPAKDSTQLQDWGHQGLIIYVSSFDQQGKECALAKINFLNLAGYVDPK QKKNEGLALLTGNKSMHALMNVVQALNSNQRFVPYRQSKVTRILQDSLCKSKTSGSVL IACLAEDCCQDSVSTLALASRSSQVVNEQYYSLSLSAKKSSKSNMNLPTDAKTLSRTF IHKTMSMQEKNARPGFNNSGVKGGQTPTANRRTQPIISSTKKSGSSICTSIKMKENYA KPKISGRKLFCPSNNSLKEENATDVASTVVTETKSATVRIQADEVQPLVGMEIRAALL NEGCSEIGNTGDVKSSEMQEVVHCSTQELLASTIQEEDYALSNMEPENSCTDMGLTCS SITDNLVEKTPASSTLSSPKLSDRLREISNSLKLLSTRPVSVRAEKWDIECARRINTI APEPKTPEVHLKFEQAEDPKDKLTARSTGIKKSLAQECLTFLNSANKEQLKSLKGIGD KRANYILELREESPELFKEISDLRDIIGMNSKEIKKMMSGIIDP</aaseq>

Gene Sequence

<dnaseqindica>4646..4681#4393..4434#4224..4292#4130..4151#4002..4048#3633..3889#3473..3545#3289..3393#3163..3213#3002..3076#2846..2879#2675..2773#2330..2586#1622..1824#1338..1530#1040..1243#393..606#96..295#cctccccccacccccccgctcctctcaaatctcctcccatcccccagatcgatctccacaaccccaaaaacaaaagaaaaaacaaaattctgggaatggagcagcagcagaagcaggaacccggcggcggcggcggcggcgtcagagtcgtcgcgaggatctgcccctgcgcaccaccgccaccaccacccgacgccgccctcaacttccaggtcgccgccctcaatgaccccgccctaatctccttcatcccccgtcgcccaaccgcatccgccgccaccgccgcggcctctgggtaagataagaacaaacgccttactgtttggattttgggggatttttgttttattttatcgctgatgaaatttaaccacacgcggttgcggcaccagccgaggagatggccccaaggataagcagcagcagcagcagcagaagtacagggtcgatggctgctacctcagagacgatcccaaccaccgcgtcttccacaacgaggtcaagccgctcattgatggcagaggtggaggaggaggaggacgcggcggcgccaaagcctgcgtcgtcgcctgtggtgatgcggctgccaaacgtcacctcttcatggtattattaatttattattatgggttactagctggatgaacttgagttgcaacggaattaaaagaagagagaaaaaaataatcgtatctttaccatttcaaatattaatccaagaattcatgttgcagttggagtttgatatcttccccccttaaatactttgtatagaaattctctttattgtttgttgttttcagatcacagtttgatagttcaatatgtcttgagatagtggttgcaggtttaggcagattcaccaccacttgagtcttttaaaagagtacagatgctaatttttcttgcattacataaatactgtatttacatgctaccccagctgaggctgagcctgcctttcgtcagaacctaacaccatcttgcattcctcagttgcaattgtcactgttaggctactcactctcctcatctgcaggggtctcctgatcaacctggcttgttcaccatggcaatggcgcaactcctcgactcctccaaagccattggtgccgctgtcactgtctcatcctatcaggtgctccaagatactcacatcctcgacctcttggagcccaagaaccatgaggttctcatactagaggatgccgacggacagactcacctcaagggcctctccagggtacagcactactcatctttcctgaattgtttgtatgcctattaaatcatagcaaaattcatttagtattaactggatccgtcatattttacaggttggtgtcaactcaatcgaggagttttcgcagctttgttgttgcgctaccaaccagcagaggcaccatcccgctaaagattccacccagttacaggattggggacaccaagggctgattatctacgtctctagctttgatcagcaaggcaaagaatgtgctctagctaagataaacttcctcaacctggcaggtctgctcttctcttttctgcacccaaccttctagctcctcattggtatagtgtgttgcataaatattgtactgcatatttcgatcatcaggctatgtggatcccaagcagaagaagaatgaaggtcttgctctactaaccggtaacaagtctatgcatgccttgatgaatgttgtccaagcactgaacagcaaccagagatttgtaccatatagacaaagcaaagtaactcgtattctgcaagattctttatgcaagagcaagacgagcggtagcgtcctgatagcctgtttggtaagctactaacagctaacactttccttttgtatagggctgcaccaaagaaaatagttatcaaactagtttgactcttacccatgtaagttctacaagtatatttacctgtgaaatgcaagttttagcatttggtcacggtacctgtcggtgattaggattcgatcaatatatgtgcgtgctatatgtacatgttgctgataaagtagtttagcataaaacagaaccttcatgcctgatagtattgttcttcactaagtcaccaaactagtactaccttttagtccaaggatatgtcggtgtgataattcgatccagtcctcatttgccatatgctacaaattgttatacagaatatgtactaaagcatcgctccatctacagttagctttgactggttgttacatatttgcatatgtaccatagctttcctgtttgaactgatacacaataggtgttactctcccaatctaaatatatgtttccttgttcttgcttgttgtaggctgaagattgctgccaagattcagtttctactcttgccttggcttctcgctcgagccaagtggtcaatgaacaatactacagcttatccttgagtgctaaaaaatcatcaaagtcaaatatgaacttacctaccgatgccaaaaccttgtcaaggacgtttattcacaaaacaatgtcgatgcaagagaagaatgcccgacctggattcaataatagtggtgtaaaaggcggacaaactcctactgctaatagaaggtcttaggaatttaatatgtgaagtaaaagattttgagcttggtatttcattacaaagtgtagctaattgaggttttatttcacgcaggactcagccaatcattagttcaacgaaaaaatctggaagctcaatctgtacttcaattaagatgaaggaaaattatgctaaacctaaaataagtggaaggtactcttgtgaaaatagatctatcattcttttttttctaaaccagcttaaattgtttttttttgttgtcaggaaattattttgtccaagcaacaattcattgaaggtacaaaactgactatcttaattgttatactctgttgcggtttatcagacaagtaacacatgggcatgaaattgcttttatcgtctaattgactaatcaatttcaacttttgaactatttaggaggagaatgctacggatgttgcttctacagtggtaacagaaactaagtcagcaacagtgagaatacaagctgatgttagtataataagcaccctactatgcatttttggtgattatcagttgagttattttatcttggacctccttacattattgtacaggaagtacaaccattagtaggcatggaaattcgagctgcattactaaatgaggtacactattatggtttcctttcagctgtgttccaaagtgaatgcctattgatataattttggagcaaaatgcagggatgttctgaaataggaaacaccggagatgttaaatcatctgaaatgcaagaagtggtacattgcagcacacaagaactgctagcaagtactatacaagaagaggtatctcttttcaaggaatacctcattatctgtttggagttctgtattaaatacgtagtgcccctgtcactttgttcaggactatgccttgtcaaatatggaaccggagaattcatgtactgacatgggattgacctgctcttctatcactggtatagcatcacttttattatttggttgccaagttcattacgagaatggaaagtatgatcacataatcacctgactggcactcccagataaccttgttgagaagactcctgccagcagtaccctatcctccccaaagttgagtgaccgactgagagagatttcaaactcattgaagcttcttagcactcggccagtgagcgtgagggcagaaaagtgggacatagaatgtgcccggagaatcaacacgattgcaccagagccaaaaactcctgaagtgcatttgaaatttgagcaagcagaagatcccaaggataaacttacggcccgcagcactgggattaaggttaacctgttttttttttaattcactgactcattttattcgcttaatgtgtttgtaccttcttataatcatcttgcctgatgaattctctcttgttttttctgccccacagaaatctctagctcaagagtgcttgacttttctcaacagtgctaataagtgagtttggcattatctttacaaccgacttcacactacttctgcatttctaatgcatgtttgtttgtgtgtccattgcagggagcaattaaaaagcttaaaggtttgctctgaatcatattgtggcagcccagattgcttctttcttaccattaacccactgatacatgtgtagggaatcggagataaaagggcaaactacatacttgagcttcgtgaggagtcaccagagctatttaaagaggtgagcactctagatcaacaagggagtagccgttagacccaagcaactagaagttattatatgacaatgcaactcagagctgattactttgctttcgcagataagtgatctgagagacatcatcggaatgaattcaaaagaggtactggagaatctgattgcaatgtgtacatttatctatgttctttgatcactggaagatggttttagttttcacaaacatttcactggattacactgccactagagatattcctgaatagtattatagtattagactccagctgcttcatttgcaaactccatggattttgggtgtactaaaattgccactgctttgttatcttcaccagatcaaaaagatgatgtccgggattatcgacccctaagaaagtgagcaatgggagtgcgatggttctcctgtggagtgtgcatatgcatctttggtcaaaggtgtcatgtctttgttttgtatttttttttgtccagttgcttctcaagagcgaatgctttggtcaggagttggcattctgtgagagaatcagtgctttgcagtggtttgctgctattatgtgttctttgtaatcatcatacagtgtcgtaccaatattgataatgtgtggcgttaatgtgatttcctctct</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0375900, RefSeq:Os04g0375900