Os04g0377600

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Revision as of 11:06, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0377600| Description = Similar to TBC1 domain family member 13| Version = NM_001059120.2 GI:297602577 GeneID:4335615| Length = 3798 bp| De...")
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Gene Name

Os04g0377600

Description

Similar to TBC1 domain family member 13

Version

NM_001059120.2 GI:297602577 GeneID:4335615

Length

3798 bp

Definition

Oryza sativa Japonica Group Os04g0377600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:18473749..18477546

Sequence Coding Region

18475720..18475854,18476066..18476164,18476253..18476381,18476797..18476976,18477057..18477173
,18477255..18477419

Expression

GEO Profiles:Os04g0377600

Genome Context

<gbrowseImage1> name=NC_008397:18473749..18477546 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:18473749..18477546 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggaaatgactatatccaaagggaacagacataattctgaaggaactggagtgcttccaagggcagaaattgtccatgatgaacatcctctaagcctcgggaaaactagtgtctggaaccaatttttccaggaatctgaaactatagagcagattgatagagatgttaagcgtactcatcctgagatgcaatttttcaatggggattcttctgatgccttgtctaatcaagagtcgctaaagcgtatacttaccatatttgcaaaattaaatccgggtataagatatgtacaaggaatgaatgaagttttggcaccactctactatgttttcaagaatgatccagaagaaaataatgctgagtcagcagagccggatgcatttttctgtttcgttgagctgcttagtggatttcgggataacttttgcaaacagcttgacaacagtgtggtgggcatacgctccacaatcagcaagttatcccagctcctgaaaaggcacgatgaagagctctggcggcatttagaggttgtgaccaaggttaatccacagttttacgcattcagatggatcaccttgctattgacgcaggaattcaagtttcgcgactgcatccatatatgggatgcactgttaggtgatcctgagggacctcaggccaccttacttcgaatctgttgtgctatgctaattcttgttcgaaggcggctcttggccggggatttcacagcaaacctaaagcttctccagagctatccacccacaaacattgaccacctcttacatatcgctaacaaactgcgagggcctattccctactga</cdnaseq>

Protein Sequence

<aaseq>MEEMTISKGNRHNSEGTGVLPRAEIVHDEHPLSLGKTSVWNQFF QESETIEQIDRDVKRTHPEMQFFNGDSSDALSNQESLKRILTIFAKLNPGIRYVQGMN EVLAPLYYVFKNDPEENNAESAEPDAFFCFVELLSGFRDNFCKQLDNSVVGIRSTISK LSQLLKRHDEELWRHLEVVTKVNPQFYAFRWITLLLTQEFKFRDCIHIWDALLGDPEG PQATLLRICCAMLILVRRRLLAGDFTANLKLLQSYPPTNIDHLLHIANKLRGPIPY</aaseq>

Gene Sequence

<dnaseqindica>1972..2106#2318..2416#2505..2633#3049..3228#3309..3425#3507..3671#gatcccgaggatctccttcccaaagcatccctgattccttcccaaacgcctaaaccccaccaccgccaccgcccatggccgacggcgccagcgcgaaccccggcgacccgccctcgccggcctcggcgaggtcggggcagcggaagcacgtccccgactggctcaacagcccgatctggtccgcgcctccccctcccgcgcgccaccgcgccccgtcccctccccgcccgcccccgcctccccctcctcccacgcagcccgcacctcccccgcgccgccgcccggagcggcggaggcggaggctccgacgacggcagcgacggcgacgacgagggcccgcgagctcgtcgcgggccccacctcgtcccggagttcacggtcgcggttagtttctcttcttcttcttcttctgatcgggcaggggattttagctttttgatcgcgtgttctcgctcgttctcggatttggcggcgcgcaattgcagctgggcaggaaggtggtggatctggctgagctgcggaggctcgcgtgccagggcgtgcccgacgccgccggcgtgcgccccgtcgtctggaaggtatggtggaatcgtcttgccttcttcttattttactactcttattacttcactatacttcactgtgtgtcaccatgctagagtaaaatgggtattacgaatactaggatttcgcttcgtcacagctcatggatgctgtccttgcattggattcatttgttttttggaaagccgtagacaacccataaatgatggaatttaggatggatgggggtttggcgtgatttgattcggatcaatcatatggtttggtgttgatacttgatacatggtttatgctgcacgcaaggattaggagcatttttttttaccttggtcttttgagatatcatggagtgtgttcggggaatgcggtttcagttatatctattctgaagtgaatgggtctctaatcaagtttttgtttcattgaaatgtttggatttctctaggttcttaagatgttttattcccatacattcagtttttaaggaccaaactatacgattgccatgaggccatgattcataaagataagttcttactagtttcagcaaactgctttgaagccagtggtagaatttcatacgctctataattgtgcattaggattacaaacaactgctcatggcattatttttgttagttgaataaatttaggagaaatcaggattcgtaattgacaaatagaatatgatttgtagtttgtaaatatgtatacaagcatttagtgatttgagcagagcattattacactgaaagcctttcagtattttttgtgttacatgtcattgcacaacttaatttcaactgacataattttatatatgaagagaactgttgtagtaggattaagctaaatgatattatggaattcactgcaagaattttaggttaaatagctatgaatgtgactaaatttagactggcttacaatgtacaaatctttaatctttctccttgtttgctacactacaaatttatttgacttgtttgatagttagcagcttctattgggatacttgccgactgatcatgcgctgtgggcatatgaactggagaaaaagcggtcccaatacagtgctttcaaagacgagcttctagttaatcctgtaagttctttatccatatgatgatttcagttctgaaccattggctggtatgtggttacattgtctgtattgatagcaattgttagcattatgagagatggacatacaagtcagaaactatgtgccctgatttaaaactagtaatttagaccagatagtgattccacggggatatgctaaagtattttattgtggtaccaacttgttttacatcttaacaatttcatttggtagttttctccttttaagaaagatacataataatatgttttggttatggtcagtcagaagttactcgaagaatggaggaaatgactatatccaaagggaacagacataattctgaaggaactggagtgcttccaagggcagaaattgtccatgatgaacatcctctaagcctcgggaaaactagtgtctggaaccaatttttccaggtaatgttcactaaatcgtaaatttatgtactgccacatgttaagtctgtattttgctttggttcaatttgatggtagaactttcaactccttgatattgagagatctcccttggtccctttgcagctcttcgttgaatttttgtaatgaatatattgtacagtatagtgtttgagctactaaaaatatacactgttatttgatacttcaggaatctgaaactatagagcagattgatagagatgttaagcgtactcatcctgagatgcaatttttcaatggggattcttctgatgccttgtctaatcaagtaagcatttattatctgatatgatgccagttctttttgtcttttgtaatgtccagttaggctaaatgtgatatatgtttgtcttcaggagtcgctaaagcgtatacttaccatatttgcaaaattaaatccgggtataagatatgtacaaggaatgaatgaagttttggcaccactctactatgttttcaagaatgatccagaagaaaataatgctgtaagtgtttttttttcccatgacgctatttgcttaaaattgttgaacgttggttcgtatgtaagttccttggctttaaggcttaaatatatgtggtagatttcttctatacagatttcctgaattcattcactggtaagtggttccctgcctgttggaaccatgtatcatgtactttatctgactttggtatactgcctaagtgactattattcattcttttttcttctgaagttaccaaagtagaaacatttcactactattgttagatagctttaccatgtaccttattttttattatgcaagtatggctgctagatgggtgatgaccggagagaaacaatgatgttatctatagaatacaagcatcggctaactctgtgcccatacaccttttaatttcttatgtaaacaggagtcagcagagccggatgcatttttctgtttcgttgagctgcttagtggatttcgggataacttttgcaaacagcttgacaacagtgtggtgggcatacgctccacaatcagcaagttatcccagctcctgaaaaggcacgatgaagagctctggcggcatttagaggttgtgaccaaggtatgcatttcaataacttttttcttgttacatttttacagtgtatttctgctcctactctaatgctttgtatattccaggttaatccacagttttacgcattcagatggatcaccttgctattgacgcaggaattcaagtttcgcgactgcatccatatatgggatgcactgttaggtgatcctgagggacctcaggttagaaactgccattcctagttccatgccatctgagaattttttgaaatgcactataaaactcttattatcttattgcaggccaccttacttcgaatctgttgtgctatgctaattcttgttcgaaggcggctcttggccggggatttcacagcaaacctaaagcttctccagagctatccacccacaaacattgaccacctcttacatatcgctaacaaactgcgagggcctattccctactgattgattatcttttgtttctcatgtttgttcttatatgttagtttgcaatgttcaaatatgtttgtaaatgattctcccatgccctatgtgattggatggttgatttaaagcatcggttctcatatag</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0377600, RefSeq:Os04g0377600