Os04g0379400

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Revision as of 11:06, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0379400| Description = Conserved hypothetical protein| Version = NM_001059124.1 GI:115457977 GeneID:4335622| Length = 3410 bp| Definition ...")
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Gene Name

Os04g0379400

Description

Conserved hypothetical protein

Version

NM_001059124.1 GI:115457977 GeneID:4335622

Length

3410 bp

Definition

Oryza sativa Japonica Group Os04g0379400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:18556147..18559556

Sequence Coding Region

18556453..18556560,18556926..18556994,18557906..18557984,18558073..18558308

Expression

GEO Profiles:Os04g0379400

Genome Context

<gbrowseImage1> name=NC_008397:18556147..18559556 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:18556147..18559556 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtctctctccggctcatcgccgcattcgcgcccgctccgccaccgccaccgccaccgcggccccgacgagcgccgccgtccgcggcgcgcctggcgagcaacggcatagcctttgtcactgtggcagccgtagccgctgcctcgccgccagcgatcgccgcgctggccgccgagccggccaacgcgctctcgctgcccacttgggccgtccacgtctccagcgtcgccgagtgggtgacggctatggcgctggtttgggactacggtgagaggacggggctcaagggttggaaaggcctctcttggggaatggttccacttcttggtggagcgatgtgcgcttgcacgtggcatttcttctataattcggagtctcttgaagtgcttgtagcgctccaaggtgctctaacagtgattggtaacattacaatgtgcatagctgcatttcgcatcttcaaagcatcccaggaaagctcaaaaagttcatag</cdnaseq>

Protein Sequence

<aaseq>MVSLRLIAAFAPAPPPPPPPRPRRAPPSAARLASNGIAFVTVAA VAAASPPAIAALAAEPANALSLPTWAVHVSSVAEWVTAMALVWDYGERTGLKGWKGLS WGMVPLLGGAMCACTWHFFYNSESLEVLVALQGALTVIGNITMCIAAFRIFKASQESS KSS</aaseq>

Gene Sequence

<dnaseqindica>2997..3104#2563..2631#1573..1651#1249..1484#agcagagcagaggtagcggcggcgttctcctgctcccgccgcattcgctcaccgacaccggtgagggtgaatccatcccatccggcctccagtttcgtctcctcgatcgccccgccgcttgcttgcgccgatccccatcctgcgcccggcgtcctcctgcttcccaccgcatcgtcgctcgccggtgagcatccctccctacccacacggccacacctcatcatcagctattctgcgttatccctcagaaaagtttagtttgggggttcaaccgaaactgggttagatctgcctctgcccagctccacctactttcaacttgttaattttgattttttgtttttagcagatgtaatttggttattgaatctcatccaaacactcttagaatagttgtacagaaaataatttgtactcatccaaactcacataaatttcttcagaagaatccataccacaagctactcataacacacaaaatatcttttttattaaggtatattcttataagaagttttcattccacaatattttctaaaagataacacttggtattaatctaatttaacattttttttctttattaggttataaattttctaaaatatatattgtgccacttggcatgaatctaatttagcattctttttttatcaggttataaattgaaaccatcgaacttactttatcttcccgtctctaaaacattgtgatatatctataatattttaatattttaatattaaaaataatttagactaataatatatatatttaaattaggtaattaataaattcaaatcagttatagtttagaataaaaaacaaaatgatatatgccaagtacaatctaataacaatagaatgttagaaacaatgtgaattcaatatttttataaagtttaagtacgattttcaaaaaaaattaaaaatagattaatatgatttatattaaaacaattttcgatttttttccaaaaaaacgcagctgataaacgtacacacggaaaacgagaattcttttctatttgtccgtttcaacgcaacctcaagtgatttagaaattgaaggggtaattaaatttatcttttttaaaaaaattaagtacacctacggtatggatacagatgtacacgtgtactgtgtacagctgctccgtacaaaatcctcaagtccgtataaaatcatcaagtctcacttctttgtgttgtgtcttgtgtgaacgccaagctccccatcccaccactaatggtctctctccggctcatcgccgcattcgcgcccgctccgccaccgccaccgccaccgcggccccgacgagcgccgccgtccgcggcgcgcctggcgagcaacggcatagcctttgtcactgtggcagccgtagccgctgcctcgccgccagcgatcgccgcgctggccgccgagccggccaacgcgctctcgctgcccacttgggccgtccacgtctccagcgtcgccgagtggtacgatctacaatacctacctgcctagctcttgcttccacggctgcaaaagatgaggggattatcgcctgttctgtccggattgcagggtgacggctatggcgctggtttgggactacggtgagaggacggggctcaagggttggaaaggcctctcttggggaatggtgagtgtaaatttggataaaatgatgatttatttgctgatgaaatttgtgttggataatgttaatttccgtactccctccgtccccccaataaaagggattttgatattttgcttgcactgtttgaccactcgtcttattcaaaaaatttgtgcaaatataaaaaacgaaaagttgcgcttaaggtactttggataataaagtaagtcacaaataaaataaataataattccaaatttttttgaataagacgaatggtcaaacagtataagtaaaatatcaaaatcccttatattaggggacggagggagtacaacatagtagcttcatgtactcctatgtattacttcctccgtttcataatgtaagattttttagcattgcccacattcatataaatgttaatgaatttaaacacacatatatgcctagattaattaacatccatatgaatatgggcaatgctagaaagtcttacattatgaaacggagggagtagtagtaagattcagagattgggaggagaatgtctcatatttatgagtatgttttcatcagaagaaatcttgtgttgttttcagtgaatctaatctgcaagtacccctctttacttatgtgtgacttctattatctatactgctcctatatagtacgacctccgtcccgatatatagtacgacttctattcatgttttatcatctaataacaataaaaatactaatcatatatttttttcaaataagatggacggtcaaacgaaacccacaactgcacttgtattgggacggaggtagtaaagtctttgctgatggtagttgcagttgttcacaagttttcgattgaatttttaacagcttgctttatgattgttgactatccagatttgcattttcttttctttgtataataggttccacttcttggtggagcgatgtgcgcttgcacgtggcatttcttctataattcggagtctcttgaagtaagatatatcccttgagttggaacactagtgcttcctttttttccgttcatcaaaattatcatcatttgcttccccgtggtttgtaactgttcacacttgtcaaatatcctaacatttcaattggtctagtgcctatttgcctttaaataaatgcacatgaaacacagatgattagacagtggaaccgttctccacttcttttgtgcaagtcgtatgcttgcgatttttttgtagtattatcaagatactctcttattgtaaaaacatacaataatataattcaactagtgtttttcataattcttctgctcacgttatttctcttcatggttcttttttttttgtttgaaaactatctgcaggtgcttgtagcgctccaaggtgctctaacagtgattggtaacattacaatgtgcatagctgcatttcgcatcttcaaagcatcccaggaaagctcaaaaagttcatagaggtacctgtatgcatatatacactaatgtactagtaactgattgtggtaaaatataccatctatctattaagtggaatcttcttgataatggcagttacacctgacatgaaatggcaaacggcagatgctgcgaaggaagaagataaaagctgctgatggcttgcagctacttcagaaagatgtttgtatgtatcaattctacaaatgccagctaaagccaccctgaaatttgtgtattgacttggtttttttctagacaatgagtgtatttactcagataagaagaaaaattacctcacctgct</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0379400, RefSeq:Os04g0379400